Modomics - A Database of RNA Modifications

MODOMICS code Name Short Name RNAMods code Moiety type
511551U (2R,4S)-1-[(4R)-3,4-dihydroxytetrahydrofuran-2-YL]-5-[(methylamino)methyl]-1,2,3,4-tetrahydropyrimidine-2,4-diol-5'-monophosphate pmnm5U nucleotide
01A 1,2'-O-dimethyladenosine m1Am œ nucleoside
01551A 1,2'-O-dimethyladenosine-5'-monophosphate pm1Am nucleotide
01G 1,2'-O-dimethylguanosine m1Gm ε nucleoside
01551G 1,2'-O-dimethylguanosine-5'-monophosphate pm1Gm nucleotide
019A 1,2'-O-dimethylinosine m1Im ξ nucleoside
019551A 1,2'-O-dimethylinosine-5'-monophosphate pm1Im nucleotide
20551U 1-(5-O-phosphono-beta-D-ribofuranosyl)-2-selanylpyrimidin-4(1H)-one pse2U nucleotide
2551U 1-(beta-D-ribofuranosyl)-2-thio-uracil-5'-phosphate ps2U nucleotide
1309U 1-methyl-3-(3-amino-3-carboxypropyl)pseudouridine m1acp3Y α nucleoside
1309551U 1-methyl-3-(3-amino-3-carboxypropyl)pseudouridine-5'-monophosphate pm1acp3Y nucleotide
1A 1-methyladenosine m1A " nucleoside
1G 1-methylguanosine m1G K nucleoside
19A 1-methylinosine m1I O nucleoside
19551A 1-methylinosine-5'-monophosphate pm1I nucleotide
19U 1-methylpseudouridine m1Y ] nucleoside
19551U 1-methylpseudouridine-5'-monophosphate pm1Y nucleotide
1551G 1N-methylguanosine-5'-monophosphate pm1G nucleotide
05551U 2',5-dimethyluridine-5'-monophosphate pm5Um nucleotide
00551A 2'-O-[(5'-phospho)ribosyl]adenosine-5'-monophosphate pAr(p) nucleotide
051C 2'-O-methyl-5-hydroxymethylcytidine hm5Cm ¡ nucleoside
051551C 2'-O-methyl-5-hydroxymethylcytidine-5'-monophosphate phm5Cm nucleotide
0A 2'-O-methyladenosine Am : nucleoside
0551A 2'-O-methyladenosine 5'-(dihydrogen phosphate) pAm nucleotide
0C 2'-O-methylcytidine Cm B nucleoside
0G 2'-O-methylguanosine Gm # nucleoside
09A 2'-O-methylinosine Im nucleoside
09551A 2'-O-methylinosine-5'-monophosphate pIm nucleotide
09U 2'-O-methylpseudouridine Ym Z nucleoside
09551U 2'-O-methylpseudouridine-5'-monophosphate pYm nucleotide
0U 2'-O-methyluridine Um J nucleoside
0503U 2'-O-methyluridine 5-oxyacetic acid methyl ester mcmo5Um Ͽ nucleoside
0503551U 2'-O-methyluridine 5-oxyacetic acid methyl ester-5'-monophosphate pmcmo5Um nucleotide
00A 2'-O-ribosyladenosine (phosphate) Ar(p) ^ nucleoside
00G 2'-O-ribosylguanosine (phosphate) Gr(p) nucleoside
00551G 2'-O-ribosylguanosine (phosphate)-5'-monophosphate pGr(p) nucleotide
3377N 2'3'-cyclic phosphate end N2'3'cp nucleotide
28A 2,8-dimethyladenosine m2,8A ± nucleoside
28551A 2,8-dimethyladenosine-5'-monophosphate pm2,8A nucleotide
21161A 2- methylthiomethylenethio-N6-isopentenyl-adenosine msms2i6A £ nucleoside
21161551A 2- methylthiomethylenethio-N6-isopentenyl-adenosine-5'-monophosphate pmsms2i6A nucleotide
21U 2-geranylthiouridine ges2U Γ nucleoside
21551U 2-geranylthiouridine-5'-monophosphate pges2U nucleotide
21C 2-lysidine k2C } nucleoside
21551C 2-lysidine-5'-monophosphate pk2C nucleotide
2A 2-methyladenosine m2A / nucleoside
2551A 2-methyladenosine-5'-monophosphate pm2A nucleotide
2164A 2-methylthio cyclic N6-threonylcarbamoyladenosine ms2ct6A ÿ nucleoside
2164551A 2-methylthio cyclic N6-threonylcarbamoyladenosine-5'-monophosphate pms2ct6A nucleotide
2160A 2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine ms2io6A nucleoside
2160551A 2-methylthio-N6-(cis-hydroxyisopentenyl) adenosine-5'-monophosphate pms2io6A nucleotide
2163A 2-methylthio-N6-hydroxynorvalylcarbamoyladenosine ms2hn6A nucleoside
2163551A 2-methylthio-N6-hydroxynorvalylcarbamoyladenosine-5'-monophosphate pms2hn6A nucleotide
2161551A 2-methylthio-N6-isopentenyl-adenosine-5'-monophosphate pms2i6A nucleotide
2161A 2-methylthio-N6-isopentenyladenosine ms2i6A * nucleoside
621A 2-methylthio-N6-methyladenosine ms2m6A nucleoside
621551A 2-methylthio-N6-methyladenosine-5'-monophosphate pms2m6A nucleotide
2162A 2-methylthio-N6-threonylcarbamoyladenosine ms2t6A [ nucleoside
2162551A 2-methylthio-N6-threonylcarbamoyladenosine-5'-monophosphate pms2t6A nucleotide
20U 2-selenouridine se2U ω nucleoside
02U 2-thio-2'-O-methyluridine s2Um nucleoside
02551U 2-thio-2'-O-methyluridine-5'-monophosphate ps2Um nucleotide
2C 2-thiocytidine s2C % nucleoside
2551C 2-thiocytidine-5'-monophosphate ps2C nucleotide
2U 2-thiouridine s2U 2 nucleoside
2551G 2N-methylguanosine-5'-monophosphate pm2G nucleotide
03U 3,2'-O-dimethyluridine m3Um σ nucleoside
03551U 3,2'-O-dimethyluridine-5'-monophosphate pm3Um nucleotide
308U 3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine acp3D Ð nucleoside
308551U 3-(3-amino-3-carboxypropyl)-5,6-dihydrouridine-5'-monophosphate pacp3D nucleotide
309U 3-(3-amino-3-carboxypropyl)pseudouridine acp3Y Þ nucleoside
1309551U 3-(3-amino-3-carboxypropyl)pseudouridine-5'-monophosphate pm1acp3Y nucleotide
30U 3-(3-amino-3-carboxypropyl)uridine acp3U X nucleoside
30551U 3-(3-amino-3-carboxypropyl)uridine-5'-monophosphate pacp3U nucleotide
3551C 3-Methylcytidine- 5'-monophosphate pm3C nucleotide
3C 3-methylcytidine m3C ' nucleoside
39U 3-methylpseudouridine m3Y κ nucleoside
39551U 3-methylpseudouridine-5'-monophosphate pm3Y nucleotide
3U 3-methyluridine m3U δ nucleoside
3551U 3-methyluridine-5'-monophosphate pm3U nucleotide
4G 4-demethylwyosine imG-14 nucleoside
4551G 4-demethylwyosine-5'-monophosphate pimG-14 nucleotide
4551C 4-methyl, cytidine-5'-monophosphate pm4C nucleotide
74U 4-thiouridine s4U 4 nucleoside
74551U 4-thiouridine-5'-monophosphate ps4U nucleotide
04551C 4N,O2'-methylcytidine-5'-monophosphate pm4Cm nucleotide
455N 5' (3' -dephospho-CoA) CoApN nucleotide
4155N 5' (3' -dephosphoacetyl-CoA) acCoApN nucleotide
4255N 5' (3' -dephosphomalonyl-CoA) malonyl-CoApN nucleotide
4355N 5' (3' -dephosphosuccinyl-CoA) succinyl-CoApN nucleotide
552N 5' diphosphate end ppN ϒ nucleotide
550N 5' hydroxyl end 5'-OH-N nucleoside
255N 5' nicotinamide adenine dinucleotide NADpN Ξ nucleotide
553N 5' triphosphate end pppN ϖ nucleotide
05C 5,2'-O-dimethylcytidine m5Cm τ nucleoside
05551C 5,2'-O-dimethylcytidine-5'-monophosphate pm5Cm nucleotide
05U 5,2'-O-dimethyluridine m5Um \ nucleoside
8551U 5,6-dihydrouridine-5'-monophosphate pD nucleotide
2521551U 5-(O-methylaceto)-2-thio-2-deoxy-uridine-5'-monophosphate pmcm5s2U nucleotide
0522U 5-(carboxyhydroxymethyl)-2'-O-methyluridine methyl ester mchm5Um b nucleoside
0522551U 5-(carboxyhydroxymethyl)-2'-O-methyluridine methyl ester-5'-monophosphate pmchm5Um nucleotide
522U 5-(carboxyhydroxymethyl)uridine methyl ester mchm5U , nucleoside
522551U 5-(carboxyhydroxymethyl)uridine methyl ester-5'-monophosphate pmchm5U nucleotide
502551U 5-(carboxymethoxy) uridine-5'-monophosphate pcmo5U nucleotide
51551C 5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) phm5C nucleotide
0583U 5-(isopentenylaminomethyl)-2'-O-methyluridine inm5Um ¼ nucleoside
0583551U 5-(isopentenylaminomethyl)-2'-O-methyluridine-5'-monophosphate pinm5Um nucleotide
2583U 5-(isopentenylaminomethyl)-2-thiouridine inm5s2U ½ nucleoside
2583551U 5-(isopentenylaminomethyl)-2-thiouridine-5'-monophosphate pinm5s2U nucleotide
583U 5-(isopentenylaminomethyl)uridine inm5U ¾ nucleoside
583551U 5-(isopentenylaminomethyl)uridine-5'-monophosphate pinm5U nucleotide
21510U 5-aminomethyl-2-geranylthiouridine nm5ges2U Δ nucleoside
21510551U 5-aminomethyl-2-geranylthiouridine-5'-monophosphate pnm5ges2U nucleotide
20510U 5-aminomethyl-2-selenouridine nm5se2U π nucleoside
20510551U 5-aminomethyl-2-selenouridine-5'-monophosphate pnm5se2U nucleotide
2510U 5-aminomethyl-2-thiouridine nm5s2U nucleoside
2510551U 5-aminomethyl-2-thiouridine-5'-monophosphate pnm5s2U nucleotide
510U 5-aminomethyluridine nm5U nucleoside
510551U 5-aminomethyluridine-5'-monophosphate pnm5U nucleotide
531U 5-carbamoylhydroxymethyluridine nchm5U r nucleoside
531551U 5-carbamoylhydroxymethyluridine-5'-monophosphate pnchm5U nucleotide
053U 5-carbamoylmethyl-2'-O-methyluridine ncm5Um ~ nucleoside
053551U 5-carbamoylmethyl-2'-O-methyluridine-5'-monophosphate pncm5Um nucleotide
253U 5-carbamoylmethyl-2-thiouridine ncm5s2U l nucleoside
253551U 5-carbamoylmethyl-2-thiouridine-5'-monophosphate pncm5s2U nucleotide
53U 5-carbamoylmethyluridine ncm5U & nucleoside
53551U 5-carbamoylmethyluridine-5'-monophosphate pncm5U nucleotide
520U 5-carboxyhydroxymethyluridine chm5U nucleoside
520551U 5-carboxyhydroxymethyluridine-5'-monophosphate pchm5U nucleotide
2540U 5-carboxymethyl-2-thiouridine cm5s2U nucleoside
2540551U 5-carboxymethyl-2-thiouridine-5'-monophosphate pcm5s2U nucleotide
051U 5-carboxymethylaminomethyl-2'-O-methyluridine cmnm5Um ) nucleoside
051551U 5-carboxymethylaminomethyl-2'-O-methyluridine-5'-monophosphate pcmnm5Um nucleotide
2151U 5-carboxymethylaminomethyl-2-geranylthiouridine cmnm5ges2U f nucleoside
2151551U 5-carboxymethylaminomethyl-2-geranylthiouridine-5'-monophosphate pcmnm5ges2U nucleotide
2051U 5-carboxymethylaminomethyl-2-selenouridine cmnm5se2U nucleoside
2051551U 5-carboxymethylaminomethyl-2-selenouridine-5'-monophosphate pcmnm5se2U nucleotide
251U 5-carboxymethylaminomethyl-2-thiouridine cmnm5s2U $ nucleoside
251551U 5-carboxymethylaminomethyl-2-thiouridine-5'-monophosphate pcmnm5s2U nucleotide
51U 5-carboxymethylaminomethyluridine cmnm5U ! nucleoside
51551U 5-carboxymethylaminomethyluridine-5'-monophosphate pcmnm5U nucleotide
52U 5-carboxymethyluridine cm5U nucleoside
52551U 5-carboxymethyluridine-5'-monophosphate pcm5U nucleotide
55U 5-cyanomethyluridine cnm5U Ѷ nucleoside
55551U 5-cyanomethyluridine-5'-monophosphate pcnm5U nucleotide
071C 5-formyl-2'-O-methylcytidine f5Cm ° nucleoside
071551C 5-formyl-2'-O-methylcytidine-5'-monophosphate pf5Cm nucleotide
71C 5-formylcytidine f5C > nucleoside
71551C 5-formylcytidine 5'-(dihydrogen phosphate) pf5C nucleotide
50C 5-hydroxycytidine ho5C Ç nucleoside
50551C 5-hydroxycytidine-5'-monophosphate pho5C nucleotide
51C 5-hydroxymethylcytidine hm5C nucleoside
50U 5-hydroxyuridine ho5U nucleoside
50551U 5-hydroxyuridine-5'-monophosphate pho5U nucleotide
0521U 5-methoxycarbonylmethyl-2'-O-methyluridine mcm5Um nucleoside
0521551U 5-methoxycarbonylmethyl-2'-O-methyluridine-5'-monophosphate pmcm5Um nucleotide
2521U 5-methoxycarbonylmethyl-2-thiouridine mcm5s2U 3 nucleoside
521U 5-methoxycarbonylmethyluridine mcm5U 1 nucleoside
521551U 5-methoxycarbonylmethyluridine-5'-monophosphate pmcm5U nucleotide
501U 5-methoxyuridine mo5U 5 nucleoside
501551U 5-methoxyuridine-5'-monophosphate pmo5U nucleotide
25U 5-methyl-2-thiouridine m5s2U F nucleoside
25551U 5-methyl-2-thiouridine-5'-monophosphate pm5s2U nucleotide
21511U 5-methylaminomethyl-2-geranylthiouridine mnm5ges2U h nucleoside
21511551U 5-methylaminomethyl-2-geranylthiouridine-5'-monophosphate pmnm5ges2U nucleotide
20511U 5-methylaminomethyl-2-selenouridine mnm5se2U nucleoside
20511551U 5-methylaminomethyl-2-selenouridine-5'-monophosphate pmnm5se2U nucleotide
2511U 5-methylaminomethyl-2-thiouridine mnm5s2U S nucleoside
2511551U 5-methylaminomethyl-2-thiouridine-5'-monophosphate pmnm5s2U nucleotide
511U 5-methylaminomethyluridine mnm5U { nucleoside
5C 5-methylcytidine m5C ? nucleoside
5551C 5-methylcytidine-5'-monophosphate pm5C nucleotide
58U 5-methyldihydrouridine m5D ρ nucleoside
58551U 5-methyldihydrouridine-5'-monophosphate pm5D nucleotide
5U 5-methyluridine m5U T nucleoside
5551U 5-methyluridine-5'-monophosphate pm5U nucleotide
254U 5-taurinomethyl-2-thiouridine tm5s2U nucleoside
254551U 5-taurinomethyl-2-thiouridine-5'-monophosphate ptm5s2U nucleotide
54U 5-taurinomethyluridine tm5U Ê nucleoside
54551U 5-taurinomethyluridine-5'-monophosphate ptm5U nucleotide
1551A 6-hydro-1-methyladenosine-5'-monophosphate pm1A nucleotide
66551A 6N-dimethyladenosine-5'-monophosphate pm6,6A nucleotide
47G 7-aminocarboxypropyl-demethylwyosine yW-86 ¥ nucleoside
47551G 7-aminocarboxypropyl-demethylwyosine-5'-monophosphate pyW-86 nucleotide
347G 7-aminocarboxypropylwyosine yW-72 Ω nucleoside
348G 7-aminocarboxypropylwyosine methyl ester yW-58 nucleoside
348551G 7-aminocarboxypropylwyosine methyl ester-5'-monophosphate pyW-58 nucleotide
347551G 7-aminocarboxypropylwyosine-5'-monophosphate pyW-72 nucleotide
101000G 7-aminomethyl-7-carbaguanine preQ1base base
101G 7-aminomethyl-7-deazaguanosine preQ1 nucleoside
101551G 7-aminomethyl-7-deazaguanosine-5'-monophosphate ppreQ1 nucleotide
100000G 7-cyano-7-carbaguanine preQ0base ψ base
100G 7-cyano-7-deazaguanosine preQ0 φ nucleoside
100551G 7-cyano-7-deazaguanosine-5'-monophosphate ppreQ0 nucleotide
7G 7-methylguanosine m7G 7 nucleoside
7551G 7N-methyl-8-hydroguanosine-5'-monophosphate pm7G nucleotide
8A 8-methyladenosine m8A â nucleoside
8551A 8-methyladenosine-5'-monophosphate pm8A nucleotide
42551C N(4)-acetylcytidine-5'-monophosphate pac4C nucleotide
02G N2,2'-O-dimethylguanosine m2Gm γ nucleoside
02551G N2,2'-O-dimethylguanosine-5'-monophospate pm2Gm nucleotide
027G N2,7,2'-O-trimethylguanosine m2,7Gm æ nucleoside
027551G N2,7,2'-O-trimethylguanosine-5'-monophosphate pm2,7Gm nucleotide
027551G N2,7,2'-O-trimethylguanosine-5'-monophosphate pm2,7Gm nucleotide
27G N2,7-dimethylguanosine m2,7G nucleoside
279553N N2,7-dimethylguanosine cap (cap DMG) m2,7GpppN ® nucleotide
27551G N2,7-dimethylguanosine-5'-monophosphate pm2,7G nucleotide
022G N2,N2,2'-O-trimethylguanosine m2,2Gm | nucleoside
022551G N2,N2,2'-O-trimethylguanosine-5'-monophospate pm2,2Gm nucleotide
227G N2,N2,7-trimethylguanosine m2,2,7G nucleoside
2279553N N2,N2,7-trimethylguanosine cap (cap TMG) m2,2,7GpppN nucleotide
227551G N2,N2,7-trimethylguanosine-5'-monophosphate pm2,2,7G nucleotide
22G N2,N2-dimethylguanosine m2,2G R nucleoside
22551G N2-dimethylguanosine-5'-monophosphate pm2,2G nucleotide
2G N2-methylguanosine m2G L nucleoside
04C N4,2'-O-dimethylcytidine m4Cm λ nucleoside
044C N4,N4,2'-O-trimethylcytidine m4,4Cm β nucleoside
044551C N4,N4,2'-O-trimethylcytidine-5'-monophospate pm4,4Cm nucleotide
44C N4,N4-dimethylcytidine m4,4C μ nucleoside
042C N4-acetyl-2'-O-methylcytidine ac4Cm nucleoside
42C N4-acetylcytidine ac4C M nucleoside
4C N4-methylcytidine m4C ν nucleoside
06A N6,2'-O-dimethyladenosine m6Am χ nucleoside
06551A N6,2'-O-dimethyladenosine-5'-monophospate pm6Am nucleotide
066A N6,N6,2'-O-trimethyladenosine m6,6Am η nucleoside
066551A N6,N6,2'-O-trimethyladenosine-5'-monophospate pm6,6Am nucleotide
66A N6,N6-dimethyladenosine m6,6A ζ nucleoside
60A N6-(cis-hydroxyisopentenyl)adenosine io6A ` nucleoside
60551A N6-(cis-hydroxyisopentenyl)adenosine-5'-monophospate pio6A nucleotide
64A N6-acetyladenosine ac6A nucleoside
64551A N6-acetyladenosine-5'-monophospate pac6A nucleotide
67A N6-formyladenosine f6A Ϩ nucleoside
67551A N6-formyladenosine-5'-monophospate pf6A nucleotide
65A N6-glycinylcarbamoyladenosine g6A nucleoside
65551A N6-glycinylcarbamoyladenosine-5'-monophosphate pg6A nucleotide
68A N6-hydroxymethyladenosine hm6A Ϫ nucleoside
68551A N6-hydroxymethyladenosine-5'-monophosphate phm6A nucleotide
63A N6-hydroxynorvalylcarbamoyladenosine hn6A nucleoside
63551A N6-hydroxynorvalylcarbamoyladenosine-5'-monophosphate phn6A nucleotide
61551A N6-isopentenyl-adenosine-5'-monophosphate pi6A nucleotide
61A N6-isopentenyladenosine i6A + nucleoside
662A N6-methyl-N6-threonylcarbamoyladenosine m6t6A E nucleoside
662551A N6-methyl-N6-threonylcarbamoyladenosine-5'-monophosphate pm6t6A nucleotide
64555N N6-methyl-adenosine pentaphosphate 5' cap (cap Ap5N) m6ApppppN nucleotide
64554N N6-methyl-adenosine tetraphosphate 5' cap (cap Ap4N) m6AppppN nucleotide
64553N N6-methyl-adenosine triphosphate 5' cap (cap A) m6ApppN nucleotide
6A N6-methyladenosine m6A = nucleoside
6551A N6-methyladenosine-5'-monophosphate pm6A nucleotide
62A N6-threonylcarbamoyladenosine t6A 6 nucleoside
62551A N6-threonylcarbamoyladenosine-5'-monophosphate pt6A nucleotide
79554N N7-methyl-guanosine tetraphosphate 5' cap (cap m7Gp4N) m7GppppN nucleotide
79553N N7-methyl-guanosine cap (cap 0) m7GpppN © nucleotide
0551C O2'-methylcytidine-5'-monophosphate pCm nucleotide
0551G O2'-methylguanosine-5'-monophosphate pGm nucleotide
0551U O2'-methyluridine 5'-monophosphate pUm nucleotide
042551C [(2~{R},3~{R},4~{R},5~{R})-5-(4-acetamido-2-oxidanylidene-pyrimidin-1-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate pac4Cm nucleotide
44551C [(2~{R},3~{S},4~{R},5~{R})-5-[4-(dimethylamino)-2-oxidanylidene-pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate pm4,4C nucleotide
A adenosine A A nucleoside
4555N adenosine pentaphosphate 5' cap (cap Ap5N) ApppppN nucleotide
4554N adenosine tetraphosphate 5' cap (cap Ap4N) AppppN nucleotide
4553N adenosine triphosphate 5' cap (cap A) ApppN nucleotide
33551A adenosine-3',5'-diphosphate pAp nucleotide
552A adenosine-5'-diphosphate nucleotide
551A adenosine-5'-monophosphate pA nucleotide
3377A adenosine-5'-phosphate-2',3'-cyclic phosphate pA2'3'cp nucleotide
553A adenosine-5'-triphosphate pppA nucleotide
20C agmatidine C+ ¿ nucleoside
20551C agmatidine-5'-monophosphate pC+ nucleotide
2551N alpha-dimethylmonophosphate 5' cap mmpN nucleotide
1551N alpha-methylmonophosphate 5' cap mpN nucleotide
103G archaeosine G+ ( nucleoside
103551G archaeosine-5'-monophosphate pG+ nucleotide
69A cyclic N6-threonylcarbamoyladenosine ct6A e nucleoside
69551A cyclic N6-threonylcarbamoyladenosine-5'-monophosphate pct6A nucleotide
C cytidine C C nucleoside
551C cytidine-5'-monophosphate pC nucleotide
3377C cytidine-5'-phosphate-2',3'-cyclic phosphate pC2'3'cp nucleotide
8U dihydrouridine D D nucleoside
102G epoxyqueuosine oQ ς nucleoside
102551G epoxyqueuosine-5'-monophosphate poQ nucleotide
104G galactosyl-queuosine galQ 9 nucleoside
104551G galactosyl-queuosine-5'-monophosphate pgalQ nucleotide
1553N gamma-methyltriphosphate 5' cap mpppN § nucleotide
105G glutamyl-queuosine gluQ nucleoside
105551G glutamyl-queuosine-5'-monophosphate pgluQ nucleotide
3377G guanoside-5'-phosphate-2',3'-cyclic phosphate pG2'3'cp nucleotide
G guanosine G G nucleoside
551G551N guanosine added to any ribonucleotide pG(pN) none nucleotide
9553N guanosine triphosphate 5' cap (cap G) GpppN ϑ nucleotide
33551G guanosine-3',5'-diphosphate pGp nucleotide
552G guanosine-5'-diphosphate ppG nucleotide
551G guanosine-5'-monophosphate pG nucleotide
553G guanosine-5'-triphosphate pppG nucleotide
2165A hydroxy-N6-threonylcarbamoyladenosine ht6A « nucleoside
2165551A hydroxy-N6-threonylcarbamoyladenosine-5'-monophosphate pht6A nucleotide
34830G hydroxywybutosine OHyW nucleoside
34830551G hydroxywybutosine-5'-monophosphate pOHyW nucleotide
9A inosine I I nucleoside
9551A inosine-5'-monophosphate pI nucleotide
42G isowyosine imG2 nucleoside
42551G isowyosine-5'-monophosphate pimG2 nucleotide
106G mannosyl-queuosine manQ 8 nucleoside
106551G mannosyl-queuosine-5'-monophosphate pmanQ nucleotide
3480G methylated undermodified hydroxywybutosine OHyWy y nucleoside
3480551G methylated undermodified hydroxywybutosine-5'-monophosphate pOHyWy nucleotide
342G methylwyosine mimG nucleoside
342551G methylwyosine-5'-monophosphate pmimG nucleotide
34832G peroxywybutosine o2yW W nucleoside
9U pseudouridine Y P nucleoside
9551U pseudouridine-5'-monophosphate pY nucleotide
10000G queuine Qbase base
10G queuosine Q Q nucleoside
10551G queuosine-5'-monophospate pQ nucleotide
3470G undermodified hydroxywybutosine OHyWx š nucleoside
3470551G undermodified hydroxywybutosine-5'-monophospate pOHyWx nucleotide
551N unknown 5' monophosphate ribonucleotide pN m nucleotide
X unknown modification xX @ nucleoside
?A unknown modified adenosine xA H nucleoside
?C unknown modified cytidine xC < nucleoside
?G unknown modified guanosine xG ; nucleoside
?U unknown modified uridine xU N nucleoside
0X unknown nucleoside 2'-O-methylated Xm Î nucleoside
N unknown ribonucleoside residue N . nucleoside
U uridine U U nucleoside
502U uridine 5-oxyacetic acid cmo5U V nucleoside
503U uridine 5-oxyacetic acid methyl ester mcmo5U υ nucleoside
503551U uridine 5-oxyacetic acid methyl ester-5'-monophospate pmcmo5U nucleotide
551U uridine-5'-monophosphate pU nucleotide
3377551U uridine-5'-monophosphate-2',3'-cyclic phosphate pU2'3'cp nucleotide
3483G wybutosine yW Y nucleoside
3483551G wybutosine-5'-monophosphate pyW nucleotide
34831551G wybutosine[C15(S)]-5'-monophosphate pyW nucleotide
34G wyosine imG nucleoside
34551G wyosine-5'-monophospate pimG nucleotide

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