Summary
| Full name | unknown nucleoside 2'-O-methylated |
| Short name | Xm |
| MODOMICS code | 0X |
| Nature of the modified residue | Natural |
| RNAMods code | Î |
| Residue unique ID | 25 |
| Found in RNA | Yes |
| Enzymes |
Hen1 (Clostridium thermocellum)
|
| Found in phylogeny | Eubacteria |
| Found naturally in RNA types | miRNA, rRNA, undefined RNA |
Chemical information
| Sum formula | |
| Type of moiety | nucleoside |
| Degeneracy | unknown base, ribose 2'-O-methylated |
| SMILES | - |
| logP | None |
| TPSA | None |
| Number of atoms | None |
| Number of Hydrogen Bond Acceptors 1 (HBA1) | None |
| Number of Hydrogen Bond Acceptors 2 (HBA2) | None |
| Number of Hydrogen Bond Donors (HBD) | None |
| InChI | None |
| InChIKey | None |
* Chemical properties calculated with Open Babel - O'Boyle et al. Open Babel: An open chemical toolbox. J Cheminform 3, 33 (2011) (link)
Download Structures
LC-MS Information
| Monoisotopic mass | 0.0 |
| Average mass | 0.0 |
| [M+H]+ | not available |
| Product ions | not available |
| Normalized LC elution time * | not available |
| LC elution order/characteristics | not available |
* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.
Reactions producing unknown nucleoside 2'-O-methylated
Last modification of this entry: Sept. 29, 2021
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