General Data

RNA Type	tRNA
SOTerm	SO:0000271
Original Source	tdbR00000491
Secondary Structure	(((((((..((((......[..)))).(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GCGCUCUUAGUUCAGUUC#GDAGAACRCGGGPCUBCAHAACCCGAU7.CGUAGGTPCAAAUCCUACAGAGCGUGCCA
Sequence (SHORT NAMES ENCODING)	GCGCUCUUAGUUCAGUUCpGmGpDAGAACpm2,2GCGGGpYCUpCmCAxAAACCCGAUpm7GNCGUAGGpm5UpYCAAAUCCUACAGAGCGUGCCA
Sequence (MODOMICS CODE ENCODING)	GCGCUCUUAGUUCAGUUC2000090551GG2000008551UAGAAC2000022551GCGGG2000009551UCU2000090551CCA2000000999AAACCCGAU2000007551G2000000000NCGUAGG2000005551U2000009551UCAAAUCCUACAGAGCGUGCCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GCGCUCUUAGUUCAGUUC#GD--AGAACRCGGGPCUBCAHAACCCGAU7.C-------------------GUAGGTPCAAAUCCUACAGAGCGUGCCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	18	20	26	31	34	37	45A	45B	54	55
Position in the Sequence	19	21	27	32	35	38	47	48	55	56
Modification Positions	Gm	D	m2,2G	Y	Cm	xA	m7G	N	m5U	Y
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS