General Data

RNA Type	tRNA
SOTerm	SO:0000264
Original Source	tdbD00001741
Secondary Structure	(((((((..((.(......[...).)).((((.........)))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GUUAAGAUKLCAGAGCCCGGDAAUCGCAPAAAACUʭAAAACUUUACAGU?AGAGGTPCAѢUUCCUCUUCUUAACACCA
Sequence (SHORT NAMES ENCODING)	GUUAAGAUpm1Gpm2GCAGAGCCCGGpDAAUCGCApYAAAACUptm5UAAAACUUUACAGUpm5CAGAGGpm5UpYCApm1AUUCCUCUUCUUAACACCA
Sequence (MODOMICS CODE ENCODING)	GUUAAGAU2000001551G2000002551GCAGAGCCCGG2000008551UAAUCGCA2000009551UAAAACU2000054551UAAAACUUUACAGU2000005551CAGAGG2000005551U2000009551UCA2000001551AUUCCUCUUCUUAACACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GUUAAGAUKLCAGAGCCCGGDA-AUCGCAPAAAACUʭAAAACUUUACAGU?-------------------AGAGGTPCAѢUUCCUCUUCUUAACACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	9	10	20	27	34	45C	54	55	58
Position in the Sequence	9	10	21	29	36	50	56	57	60
Modification Positions	m1G	m2G	D	Y	tm5U	m5C	m5U	Y	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS