General Data

RNA Type	tRNA
SOTerm	SO:0000271
Original Source	tdbR00000496
Secondary Structure	(((((((..((((....[..)))).(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GGAUCCGUKGCGCAAD#GDAGCGCGPCUGABUBCAKAZCAGAAGGDNGCGUGTPCGѢUUCACGPCGGGUUCACCA
Sequence (SHORT NAMES ENCODING)	GGAUCCGUpm1GGCGCAApDpGmGpDAGCGCGpYCUGApCmUpCmCApm1GApYmCAGAAGGpDxUGCGUGpm5UpYCGpm1AUUCACGpYCGGGUUCACCA
Sequence (MODOMICS CODE ENCODING)	GGAUCCGU2000001551GGCGCAA2000008551U2000090551GG2000008551UAGCGCG2000009551UCUGA2000090551CU2000090551CCA2000001551GA2000909551UCAGAAGG2000008551U2000000999UGCGUG2000005551U2000009551UCG2000001551AUUCACG2000009551UCGGGUUCACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GGAUCCGUKGCGCAAD--#GD--AGCGCGPCUGABUBCAKAZCAGAAGGDN-------------------GCGUGTPCGѢUUCACGPCGGGUUCACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	9	16	18	20	27	32	34	37	39	45B	45C	54	55	58	65
Position in the Sequence	9	16	17	19	26	31	33	36	38	46	47	53	54	57	64
Modification Positions	m1G	D	Gm	D	Y	Cm	Cm	m1G	Ym	D	xU	m5U	Y	m1A	Y
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS