| RNA Type | tRNA |
|---|---|
| Original Source | 2Z9Q_A |
| Secondary Structure | (((((((..(((.....[...))).(((((.......))))).....(((((..]....)))))))))))).... |
| Sequence (UNICHARACTER ENCODING) | CGGAUUUALCUCAGDDGGGAGAGCRCCAGABU#AAYAP?UGGAG7UC?UGUGTPCGѢUCCACAGAAUUCGCACCA |
| Sequence (SHORT NAMES ENCODING) | CGGAUUUApm2GCUCAGpDpDGGGAGAGCpm2,2GCCAGApCmUpGmAApyWApYpm5CUGGAGpm7GUCpm5CUGUGpm5UpYCGpm1AUCCACAGAAUUCGCACCA |
| Sequence (MODOMICS CODE ENCODING) | CGGAUUUA2000002551GCUCAG2000008551U2000008551UGGGAGAGC2000022551GCCAGA2000090551CU2000090551GAA2003483551GA2000009551U2000005551CUGGAG2000007551GUC2000005551CUGUG2000005551U2000009551UCG2000001551AUCCACAGAAUUCGCACCA |
| Consensus Secondary Structure | .(((((((..((((......[....)))).(((((.......)))))........................(((((..]....)))))))))))).... |
| Alignment with Modification | --CGGAUUUALCUCAGDD-GGG--AGAGCRCCAGABU#AAYAP?UGGAG7UC-------------------?UGUGTPCGѢUCCACAGAAUUCGCACCA |
| Method Classification | Score |
|---|---|
| Multiple direct experimental evidence | 1 |
| Direct experimental evidence | 2 |
| Inferred based on indirect experimental evidence | 3 |
| Predicted computationally | 4 |
| Evidence not yet annotated (Unknown) | 5 |
| Irrelevant | 6 |
| Position in the Alignment | 10 | 16 | 17 | 26 | 32 | 34 | 37 | 39 | 40 | 45A | 49 | 54 | 55 | 58 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Position in the Sequence | 9 | 15 | 16 | 25 | 31 | 33 | 36 | 38 | 39 | 45 | 48 | 53 | 54 | 57 |
| Modification Positions | m2G | D | D | m2,2G | Cm | Gm | yW | Y | m5C | m7G | m5C | m5U | Y | m1A |
| Level of Experimental Evidence | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
| Level of Experimental Reliability | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
| Source | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB | RCSB |