General Data

RNA Type	tRNA
SOTerm	SO:0000256
Original Source
Secondary Structure	.(((((((..((((...........)))).(((((.......)))))........................(((((.......))))))))))))....
Sequence (UNICHARACTER ENCODING)	GTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTGGTTCGѢGCCCACCCAGGGACGCCA
Sequence (SHORT NAMES ENCODING)	Gpm5UCpm5UCpm5UGpm5UGGCGCAApm5UCGGpm5Upm5UAGCGCGpm5Upm5UCGGCpm5UGpm5Upm5UAACCGAAAGGpm5Upm5UGGpm5UGGpm5Upm5UCGpm1AGCCCACCCAGGGACGCCA
Sequence (MODOMICS CODE ENCODING)	G2000005551UC2000005551UC2000005551UG2000005551UGGCGCAA2000005551UCGG2000005551U2000005551UAGCGCG2000005551U2000005551UCGGC2000005551UG2000005551U2000005551UAACCGAAAGG2000005551U2000005551UGG2000005551UGG2000005551U2000005551UCG2000001551AGCCCACCCAGGGACGCCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GTCTCTGTGGCGCAATCGGTT--AGCGCGTTCGGCTGTTAACCGAAAGGTT-------------------GGTGGTTCGѢGCCCACCCAGGGACGCCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	2	4	6	8	16	19	20	27	28	33	35	36	45B	45C	51	54	55	58
Position in the Sequence	2	4	6	8	16	20	21	28	29	34	36	37	48	49	52	55	56	59
Modification Positions	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m5U	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS