DNAzymeBuilder

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Year	First_Author	Laboratory	Title	PubMed_id	DOI
1994	Breaker, R. R.	Joyce, G. F.	A DNA enzyme that cleaves RNA	9383394	10.1016/1074-5521(94)90014-0
1997	Santoro, S. W.	Joyce, G.F	A general purpose RNA-cleaving DNA enzyme	9113977	10.1073/pnas.94.9.4262
1998	Carmi, N.	Breaker, R. R	Cleaving DNA with DNA	9482868	10.1073/pnas.95.5.2233
1998	Roth, A.	Breaker, R. R.	An amino acid as a cofactor for a catalytic polynucleotide	9600911	10.1073/pnas.95.11.6027
1998	Santoro, S. W.	Joyce, G. F.	Mechanism and Utility of an RNA-Cleaving DNA Enzyme	9748341	10.1021/bi9812221
2000	CAIRNS, M. J.	CAIRNS, M. J.	The influence of arm length asymmetry and base substitution on the activity of the 10-23 DNA enzyme	11079572	10.1089/oli.1.2000.10.323
2000	Li, J	Lu, Y.	In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme	10606646	10.1093/nar/28.2.481
2000	Cairns, M. J.	Sun, L. Q.	Nucleic acid mutation analysis using catalytic DNA	637339	10.1093/nar/28.3.e9
2000	Todd, A. V.	Todd, A. V.	DzyNA-PCR: Use of DNAzymes to Detect and Quantify Nucleic Acid Sequences in a Real-Time Fluorescent Format	10794743	10.1093/clinchem/46.5.625
2000	Li, J.	Lu, Y	A highly sensitive and selective catalytic DNA biosensor for lead ions		10.1021/ja0021316
2001	Carmi, N.	Breaker, R. R	Characterization of a DNA-Cleaving deoxyribozyme	11557347	10.1016/s0968-0896(01)00035-9
2001	Joyce, G. F.	Joyce, G. F.	RNA Cleavage by the 10-23 DNA Enzyme	11582801	10.1016/s0076-6879(01)41173-6
2002	Ferrari, D.	Peracchi, A.	A continuous kinetic assay for RNA-cleaving deoxyribozymes, exploiting ethidium bromide as an extrinsic fluorescent probe	12384614	10.1093/nar/gnf111
2002	Wang, D.	Sen, D.	A General Strategy for Effector-mediated Control of RNA-cleaving Ribozymes and DNA Enzymes	12054766	10.1016/S0022-2836(02)00046-3
2002	Dass, C. R.	Sun, L. Q.	Cellular Uptake, Distribution, and Stability of 10-23 Deoxyribozymes	12477279	10.1089/108729002761381276
2002	Fürste, J. P.	Kurreck, J.	Sequence Requirements in the Catalytic Core of the “10-23” DNA Enzyme	12192010	10.1074/jbc.M207094200
2003	CAIRNS, M. J.	CAIRNS, M. J.	Optimisation of the 10-23 DNAzyme-substrate pairing interactions enhanced RNA cleavage activity at purine-cytosine target sites.	12771215	10.1093/nar/gkg378
2003	Brown, A.	Lu, Y.	A Lead-Dependent DNAzyme with a Two-Step Mechanism	12795611	10.1021/bi027332w
2003	Chakraborti, S.	Banerjea, A. C.	Identification of Cleavage Sites in the HIV-1 TAR RNA by 10-23 and 8-17 Catalytic Motif Containing DNA Enzymes	12741771	10.1021/bm025698i
2003	Flynn-Charlebois, A.	Silverman, S. K.	In Vitro Evolution of an RNA-Cleaving DNA Enzyme into an RNA Ligase Switches the Selectivity from 3′-5′ to 2′-5′	12720447	10.1021/ja0340331
2003	Breaker, R. R.	Lazarev, D.	A common speed limit for RNA-cleaving ribozymes and deoxyribozymes	12869706	10.1261/rna.5670703
2003	Schubert, S.	Schubert, S.	RNA cleaving ‘10-23’ DNAzymes with enhanced stability and activity	14530446	10.1093/nar/gkg791
2003	Wang, Y	Silverman, S. K	Deoxyribozymes That Synthesize Branched and Lariat RNA	12783536	10.1021/ja035150z
2003	Wang, Y	Silverman, S. K	Characterization of Deoxyribozymes That Synthesize Branched RNA	14690435	10.1021/bi0355847
2003	Flynn-Charlebois, A	Silverman, S. K	Deoxyribozymes with 2′-5′ RNA Ligase Activity	12603132	10.1021/ja028774y
2003	Flynn-Charlebois, A	Silverman, S. K	In vitro evolution of an RNA-cleaving DNA enzyme into an RNA ligase switches the selectivity from 3'-5' to 2'-5'.	12720447	10.1021/ja0340331
2003	Ricca, B. L	Silverman, S. K	Optimization and Generality of a Small Deoxyribozyme that Ligates RNA	12860124	10.1016/s0022-2836(03)00654-5
2004	Cruz, R. P.	Li, Y.	Dinucleotide Junction Cleavage Versatility of 8-17 Deoxyribozyme	15112995	10.1016/j.chembiol.2003.12.012
2004	Bonaccio, M.	Peracchi, A.	Kinetic and thermodynamic characterization of the RNA-cleaving 8-17 deoxyribozyme	14963261	10.1093/nar/gkh250
2004	Cairns, M. J	Cairns, M. J	Target-Site Selection for the 10–23 DNAzyme	15017056	10.1385/1-59259-746-7:267
2004	Coppins, R. L	Silverman, S. K	A DNA enzyme that mimics the first step of RNA splicing	14758353	10.1038/nsmb727
2004	Coppins, R. L	Silverman, S. K	Rational modification of a selection strategy leads to deoxyribozymes that create native 3'-5' RNA linkages.	15600344	10.1021/ja045817x
2004	Prior, T. K	Silverman, S. K	Structure–function correlations derived from faster variants of a RNA ligase deoxyribozyme	14960718	10.1093/nar/gkh263
2005	Peracchi, A.	Peracchi, A.	A Mutational Analysis of the 8–17 Deoxyribozyme Core	16125199	10.1016/j.jmb.2005.07.059
2005	Zaborowska, Z.	Erdmann, V. A.	Deletion analysis in the catalytic region of the 10–23 DNA enzyme	15642375	10.1016/j.febslet.2004.12.008
2005	Pratico, E	Silverman, S. K	A deoxyribozyme that synthesizes 20,50-branched RNA with any branch-site nucleotide	15967808	10.1093/nar/gki656
2005	Coppins, R. L	Silverman, S. K	A Deoxyribozyme that Forms a Three-Helix-Junction Complex with its RNA Substrates and has General RNA Branch-Forming Activity	15740125	10.1021/ja044881b
2005	Wang, Y	Silverman, S. K	Directing the Outcome of Deoxyribozyme Selections To Favor Native 3 ′-5′ RNA Ligation	15723545	10.1021/bi0478291
2005	Purtha, W	Silverman, S. K	General Deoxyribozyme-Catalyzed Synthesis of Native 3′-5′ RNA Linkages	16173722	10.1021/ja0533702
2005	Hoadley, K. A	Silverman, S. K	Zn2+-dependent deoxyribozymes that form natural and unnatural RNA linkages.	15966746	10.1021/bi050146g
2005	Coppins, R. L	Silverman, S. K	Mimicking the First Step of RNA Splicing: An Artificial DNA Enzyme Can Synthesize Branched RNA Using an Oligonucleotide Leaving Group as a 5′-Exon Analogu	16216067	10.1021/bi0507229
2005	Semlow, D. R	Silverman, S. K	Parallel selections in vitro reveal a preference for 2'-5' RNA ligation upon deoxyribozyme-mediated opening of a 2',3'-cyclic phosphate.	16007488	10.1007/s00239-004-0326-y
2006	Hou, W.	Wo, J.	Inhibition of hepatitis B virus X gene expression by 10-23 DNAzymes	16930733	10.1016/j.antiviral.2006.07.001
2006	Chen, X.	He, L.	Construction of Molecular Logic Gates with a DNA-Cleaving Deoxyribozyme	16470893	10.1002/anie.200502511
2006	Asanuma, H.	Asanuma, H.	Enhancement of RNA cleavage activity of 10–23 DNAzyme by covalently introduced intercalator	17146528	10.1039/b611078a
2006	Hayashi, H.	Asanuma, H.	Activation of DNA enzyme 10–23 by tethering an intercalator to its backbone	17150870	10.1093/nass/nrl083
2006	Zelin, E	Silverman, S. K	Adenosine Is Inherently Favored as the Branch-Site RNA Nucleotide in a Structural Context That Resembles Natural RNA Splicing	16503631	10.1021/bi052499l
2006	Wang, Y	Silverman, S. K	Experimental Tests of Two Proofreading Mechanisms for 5=-Splice Site Selection	17163761	10.1021/cb6001569
2007	Kim, H. K.	Lu, Y.	Dissecting metal ion–dependent folding and catalysis of a single DNAzyme	17965708	10.1038/nchembio.2007.45
2007	Chiuman, W.	Li, Y.	Efficient signaling platforms built from a small catalytic DNA and doubly labeled fluorogenic substrates	17169997	10.1093/nar/gkl1056
2007	Leung, E.	Sen, D.	Electron Hole Flow Patterns through the RNA-Cleaving 8-17 Deoxyribozyme Yield Unusual Information about Its Structure and Folding	17254951	10.1016/j.chembiol.2006.11.006
2007	Sheng, Y.	Zhang, J.	Design and switch of catalytic activity with the DNAzyme–RNAzyme combination	17434496	10.1016/j.febslet.2007.03.062
2007	Sheng, Y.	Miao, J.	Hepatitis B virus S gene therapy with 10-23 DNAzyme delivered by chitosan-g-stearic acid micelles		10.1039/C9RA00330D
2007	Höbartner, C	Silverman, S. K	Engineering a Selective Small-Molecule Substrate Binding Site into a Deoxyribozyme	17694519	10.1002/anie.200702217
2007	Baum, D. A	Silverman, S. K	Deoxyribozyme-Catalyzed Labeling of RNA	17394278	10.1002/anie.200700357
2008	Schlosser, K.	Li, Y.	Sequence-function relationships provide new insight into the cleavage site selectivity of the 8–17 RNA-cleaving deoxyribozyme	18203744	10.1093/nar/gkm1175
2008	Nawrot, B.	Nawrot, B.	Effect of RP and SPPhosphorothioate Substitution at the Scissile Site on the Cleavage Activity of Deoxyribozyme 10-23		10.2174/138527208785161204
2008	Wang, T. H.	Au, L. C.	The Use of 10-23 DNAzyme to Selectively Destroy the Allele of mRNA with a Unique Purine-Pyrimidine Dinucleotide	18699741	10.1089/oli.2008.0138
2008	Kim, H. K	Lu, Y.	Probing Metal Binding in the 8–17 DNAzyme by TbIII Luminescence Spectroscopy	18688837	10.1002/chem.200701789
2008	Mui, T. P	Silverman, S. K	Convergent and General One-Step DNA-Catalyzed Synthesis of Multiply Branched DNA	18808125	10.1021/ol801568q
2008	Kost, D	Silverman, S. K	Controlling the direction of site-selectivity and regioselectivity in RNA ligation by Zn2+-dependent deoxyribozymes that use 2′,3′-cyclic phosphate RNA substrates	19005599	10.1039/b813566e
2009	Chandra, M.	Silverman, S. K	DNA-catalyzed sequence-specific hydrolysis of DNA	19684594	10.1038/nchembio.201
2009	Mazumdar, D.	Lu, Y.	Activity, Folding and Z-DNA Formation of the 8-17 DNAzyme in the Presence of Monovalent Ions	19326878	10.1021/ja8082939
2009	Schlosser, K.	Li, Y.	DNAzyme-mediated catalysis with only guanosine and cytidine nucleotides	19050014	10.1093/nar/gkn930
2009	Yu, S. H.	Au, L. C.	Specific repression of mutant K-RAS by 10–23 DNAzyme: Sensitizing cancer cell to anti-cancer therapies	19014906	10.1016/j.bbrc.2008.11.027
2010	Xiao, Y.	Silverman, S. K	Functional Compromises among pH Tolerance, Site Specificity, and Sequence Tolerance for a DNA-Hydrolyzing Deoxyribozyme	20923239	10.1021/bi1013672
2010	Gerasimova, Y. V.	Kolpashchikov, D. M.	Nucleic acid detection using MNAzymes	20189100	10.1016/j.chembiol.2010.02.003
2010	Jiang, D.	Zhang, J.	An allosteric DNAzyme with dual RNA-cleaving and DNA-cleaving activities	20553490	10.1111/j.1742-4658.2010.07669.x
2010	Lan, T.	Lu, Y.	A highly selective lead sensor based on a classic lead DNAzyme	20407665	10.1039/b926910j
2010	Lam, J. C.	Li, Y.	Influence of Cleavage Site on Global Folding of an RNACleaving DNAzyme	20665772	10.1002/cbic.201000144
2010	Wang, B.	Xi, Z.	Probing the Function of Nucleotides in the Catalytic Cores of the 8-17 and 10-23 DNAzymes by Abasic Nucleotide and C3 Spacer Substitutions	20698496	10.1021/bi100304b
2010	Wang, B.	Xi, Z.	Replacing Mg2+ by Fe2+ for RNA-cleaving DNAzymes	31322805	10.1002/cbic.201900344
2010	Smuga, D.	Nawrot, B.	RNA-cleaving 10–23 deoxyribozyme with a single amino acid-like functionality operates without metal ion cofactors		10.1039/B9NJ00705A
2010	Li, J.	Li, J.	The 10–23 DNA Enzyme Generated by a Novel Expression Vector Mediate Inhibition of Taco Expression in Macrophage	20059315	10.1089/oli.2009.0217
2010	Richards, J. L.	Dmochowski, I. J.	Turning the 10–23 DNAzyme On and Off with Light	20077457	10.1002/cbic.200900702
2010	Wachowius, F	Höbartner, C	Combinatorial Mutation Interference Analysis Reveals Functional Nucleotides Required for DNA Catalysis	20872387	10.1002/anie.201003940
2011	Xiao, Y.	Silverman, S. K	Merely two mutations switch a DNA-hydrolyzing deoxyribozyme from heterobimetallic (Zn 2+ /Mn 2+ ) to monometallic (Zn 2+ -only) behavior	21125108	10.1039/c0cc04575f
2011	He, J.	Liu, K.	A novel strategy of chemical modification for rate enhancement of 10–23 DNAzyme: a combination of A9 position and 8-aza-7-deaza-2¢-deoxyadenosine analogs	21717014	10.1039/c1ob05065f
2011	Yi, J.	Yi, J.	Efficient Silencing of Gene Expression by an ASON– Bulge–DNAzyme Complex	21490924	10.1371/journal.pone.0018629
2011	Lee, C. S	Silverman, S. K	Improved deoxyribozymes for synthesis of covalently branched DNA and RNA	20739352	10.1093/nar/gkq753
2011	Wachowius, F	Höbartner, C	Probing Essential Nucleobase Functional Groups in Aptamers and Deoxyribozymes by Nucleotide Analogue Interference Mapping of DNA	21863810	10.1021/ja205894w
2011	Alila, K. O	Baum, D. A	Modulation of an RNA-branching deoxyribozyme by a small molecule	21258742	10.1039/c0cc04971a
2012	Xiao, Y.	Silverman, S. K	Establishing broad generality of DNA catalysts for site-specific hydrolysis of single-stranded DNA	22021383	10.1093/nar/gkr860
2012	Dokukin, V.	Silverman, S. K	Lanthanide ions as required cofactors for DNA catalysts	23243490	10.1039/C2SC01067D.
2012	Jung, J.	Kim, S. K.	Effect of Single-Base Mutation on Activity and Folding of 10-23 Deoxyribozyme Studied by Three-Color Single-Molecule ALEX FRET	22329599	10.1021/jp2117196
2012	Wang, Q.	Liu, K.	Catalytic cleavage activities of 10–23 DNAzyme analogs functionalized with an amino group in its catalytic core		10.1016/j.apsb.2011.11.002
2012	Robaldo, L.	Iribarren, A. M.	Influence of conformationally restricted pyrimidines on the activity of 10–23 DNAzymes	22429508	10.1016/j.bmc.2012.02.047
2012	Fokina, A.	Fokina, A.	Targeting Insulin-like Growth Factor I with 10−23 DNAzymes: 2′-OMethyl Modifications in the Catalytic Core Enhance mRNA Cleavage	22352843	10.1021/bi201532q
2012	Miao, J.	Zhang, X. G.	Inhibition on hepatitis B virus e-gene expression of 10–23 DNAzyme delivered by novel chitosan oligosaccharide–stearic acid micelles		10.1016/j.carbpol.2011.09.022
2012	Ruble, B. K.	Dmochowski, I. J.	Mismatch discrimination and efficient photomodulation with split 10–23 DNAzymes	22544974	10.1016/j.ica.2011.10.068
2012	Velez, T.	Silverman, S. K.	Systematic Evaluation of the Dependence of Deoxyribozyme Catalysis on Random Region Length	23088677	10.1021/co300111f
2013	Gu, H.	Breaker, R. R	Small, Highly Active DNAs That Hydrolyze DNA	23679108	10.1021/ja403585e
2013	Liu, Y.	He, J.	Breaking the conservation of guanine residues in the catalytic loop of 10–23 DNAzyme by position-specific nucleobase modifications for rate enhancement	23615852	10.1039/c3cc42067a
2013	Parker, D. J.	Silverman, S. K.	DNA Catalysis of a Normally Disfavored RNA Hydrolysis Reaction	23697866	10.1021/ja4032488
2013	Gu, H.	Breaker, R. R.	Production of single-stranded DNAs by self-cleavage of rolling-circle amplifcation products	23750543	10.2144/000114009
2013	Kumar, B.	Khanna, M.	Sequence-Specific Cleavage of BM2 Gene Transcript of Influenza B Virus by 10-23 Catalytic Motif Containing DNA Enzymes Significantly Inhibits Viral RNA Translation and Replication	23971908	10.1089/nat.2013.0432
2013	Samanta, B	Höbartner, C	Combinatorial Nucleoside-Deletion-Scanning Mutagenesis of Functional DNA	23371361	10.1002/anie.201208103
2013	Samanta, B	Höbartner, C	Mutationsanalyse funktionaler DNA durch statistische Nucleosiddeletion		10.1002/ange.201208103
2013	Behera, A. K	Baum, D. A	Enhanced Deoxyribozyme-Catalyzed RNA Ligation in the Presence of Organic Cosolvents	23529690	10.1002/bip.22191
2013	Javadi-Zarnaghi, F	Höbartner, C	Lanthanide Cofactors Accelerate DNA-Catalyzed Synthesis of Branched RNA	23895365	10.1021/ja406162z
2014	Wang, M.	Tang, Z	In vitro selection of DNA-cleaving deoxyribozyme with site-specific thymidine excision activity.	25030901	10.1093/nar/gku592
2014	Huang, P. J. J.	Liu, J.	Ultrasensitive DNAzyme Beacon for Lanthanides and Metal Speciation	24383540	10.1021/ac403762s
2014	Li, Z.	He, J.	Position-specific modification with imidazolyl group on10–23 DNAzyme realized catalytic activity enhancement	24961875	10.1016/j.bmc.2014.05.070
2014	Huang, P. J. J.	Liu, J.	In Vitro Selection of a New Lanthanide-Dependent DNAzyme for Ratiometric Sensing Lanthanides	25199650	10.1021/ac5029962
2014	Xu, J.	Jiang, D.	Engineering a DNA-cleaving DNAzyme and PCR into a simple sensor for zinc ion detection	24677031	10.1007/s00216-014-7732-9
2014	Furukawa, K.	Minakawa, N.	Allosteric control of a DNA-hydrolyzing deoxyribozyme with short oligonucleotides and its application in DNA logic gates	24740418	10.1039/c4ob00451e
2014	Wawrzyniak-Turek, K	Höbartner, C	Deoxyribozyme-Mediated Ligation for Incorporating EPR Spin Labels and Reporter Groups into RNA	25432745	10.1016/B978-0-12-801122-5.00004-0
2014	Büttner, L	Höbartner, C	Site-specific labeling of RNA at internal ribose hydroxyl groups: terbium-assisted deoxyribozymes at work	24825547	10.1021/ja503864v
2015	Zhu, J.	He, J.	Studies on the preferred uracil-adenine base pair at the cleavage site of 10-23 DNAzyme by functional group modifications on adenine	26145822	10.1016/j.bmc.2015.06.041
2015	Huang, P. J. J.	Liu, J.	A new heavy lanthanide-dependent DNAzyme displaying strong metal cooperativity and unrescuable phosphorothioate effect	25488814	10.1093/nar/gku1296
2015	Liu, C.	Jiang, D.	A glucose oxidase-coupled DNAzyme sensor for glucose detection in tears and saliva	25863343	10.1016/j.bios.2015.03.070
2015	Wang, F.	Liu, J.	Tandem DNAzymes for mRNA cleavage: choice of enzyme, metal ions and the antisense effect	25769818	10.1016/j.bmcl.2015.02.032
2015	Vazin, M.	Liu, J.	Biochemical Characterization of a Lanthanide-Dependent DNAzyme with Normal and Phosphorothioate-Modified Substrates.	26356231	10.1021/acs.biochem.5b00691
2015	Torabi, S. F.	Lu, Y.	In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing	25918425	10.1073/pnas.1420361112
2015	Torabi, S. F.	Lu, Y.	Identification of the Same Na(+)-Specific DNAzyme Motif from Two In Vitro Selections Under Different Conditions.	26577294	10.1007/s00239-015-9715-7
2015	Zhou, W.	Liu, J.	DNAzyme hybridization, cleavage, degradation, and sensing in undiluted human blood serum	25757186	10.1021/acs.analchem.5b00220
2015	Huang, P. J. J.	Liu, J.	Desulfurization Activated Phosphorothioate DNAzyme for the Detection of Thallium.	26393365	10.1021/acs.analchem.5b02568
2015	Turriani, E	Höbartner, C	Mg2+-dependent conformational changes and product release during DNA-catalyzed RNA ligation monitored by Bimane fluorescence	25505142	10.1093/nar/gku1268
2016	Wang, M. Q.	Wang, M. Q.	Characterization of deoxyribozymes with site-specific oxidative cleavage activity against DNA obtained by in vitro selection	26809730	10.1039/c6ob00148c
2016	Saran, R.	Liu, J.	A Silver DNAzyme	26977895	10.1021/acs.analchem.6b00327
2016	Ma, L.	Liu, J.	DNA Adsorption by ZnO Nanoparticles near Its Solubility Limit: Implications for DNA Fluorescence Quenching and DNAzyme Activity Assays	27166701	10.1021/acs.langmuir.6b00906
2016	Zhou, W.	Liu, J.	In Vitro Selection of Chromium-Dependent DNAzymes for Sensing Chromium(III) and Chromium(VI)	27249536	10.1002/chem.201601426
2016	Zhou, W.	Liu, J.	A DNAzyme requiring two different metal ions at two distinct sites	26657636	10.1093/nar/gkv1346
2016	Zhou, W.	Liu, J.	In vitro selection in serum: RNA-cleaving DNAzymes for measuring Ca2+ and Mg2+		10.1021/acssensors.5b00306
2016	Liu, S.	Liu, S.	Ultrasensitive electrochemical DNAzyme sensor for lead ion based on cleavage-induced template-independent polymerization and alkaline phosphatase amplification	27093488	10.1016/j.bios.2016.04.026
2016	Javadi‐Zarnaghi, F	Höbartner, C	Functional Hallmarks of a Catalytic DNA that Makes Lariat RNA	26525606	10.1002/chem.201503238
2016	Ponce-Salvatierra, A	Höbartner, C	Crystal structure of a DNA catalyst.	26735012	10.1038/nature16471
2017	Lee, Y.	Silverman, S. K	DNA-Catalyzed DNA Cleavage by a Radical Pathway with Well-Defined Products	27935689	10.1021/jacs.6b10274
2017	Kasprowicz, A.	Ciesiołka, J.	Characterization of Highly Efficient RNA-Cleaving DNAzymes that Function at Acidic pH with No Divalent Metal-Ion Cofactors	28168150	10.1002/open.201600141
2017	Dhamodharan, V.	Yokobayashi, Y.	Large Scale Mutational and Kinetic Analysis of a Self-Hydrolyzing Deoxyribozyme	29058875	10.1021/acschembio.7b00621
2017	Sun, Y.	Jiang, D.	New cofactors and inhibitors for a DNA-cleaving DNAzyme: superoxide anion and hydrogen peroxide mediated an oxidative cleavage process	28336968	10.1038/s41598-017-00329-y
2017	Wang, S.	Jiang, D.	The Triple Roles of Glutathione for a DNA-Cleaving DNAzyme and Development of a Fluorescent Glutathione/Cu2+-Dependent DNAzyme Sensor for Detection of Cu2+ in Drinking Water	28723208	10.1021/acssensors.6b00667
2017	Liu, M.	Li, Y.	Discovery and Biosensing Applications of Diverse RNA-Cleaving DNAzymes	28805376	10.1021/acs.accounts.7b00262
2017	Peracchi, A.	Peracchi, A.	Local conformational changes in the 8–17 deoxyribozyme core induced by activating and inactivating divalent metal ions	29022640	10.1039/c7ob02001e
2017	Fokina, A. A.	Fokina, A. A.	Delivery of therapeutic RNA-cleaving oligodeoxyribonucleotides (deoxyribozymes): from cell culture studies to clinical trials	27892730	10.1080/17425247.2017.1266326
2017	Li, P.	He, J.	Studies on the Two Thymine Residues in the Catalytic Core of 10-23 DNAzyme: The Impact on the Catalysis of Their 5-Substituted Functional Groups	28640218	10.3390/molecules22071011
2017	Zhou, W.	Liu, J.	Two Completely Different Mechanisms for Highly Specific Na+ Recognition by DNAzymes	28658518	10.1002/cbic.201700184
2017	Saran, R.	Liu, J.	A Silver-Specific DNAzyme with a New Silver Aptamer and Salt-Promoted Activity.	28345892	10.1021/acs.biochem.6b01131
2017	arrocci, T. J	Höbartner, C	Debranchase-resistant labeling of RNA using the 10DM24 deoxyribozyme and fluorescent modified nucleotides	28984884	10.1039/c7cc06703h
2018	Sednev, M. V.	Höbartner, C.	N6-Methyladenosine-Sensitive RNA-Cleaving Deoxyribozymes	30276938	10.1002/anie.201808745
2018	Du, X.	Gu, H.	Retraining and Optimizing DNA-hydrolyzing Deoxyribozymes for Robust Single- and Multiple-turnover Activities		10.1021/acscatal.8b01466
2018	Cepeda-Plaza, M.	Lu, Y.	Evidence of a General Acid−Base Catalysis Mechanism in the 8−17 DNAzyme	29389111	10.1021/acs.biochem.7b01096
2018	Kamiya, Y.	Asanuma, H.	Development of Visible-Light-Responsive RNA Scissors Based on a 10–23 DNAzyme	29682882	10.1002/cbic.201800020
2018	Jimmy Huang, P. J.	Liu, J.	Instantaneous Iodine-Assisted DNAzyme Cleavage of Phosphorothioate RNA.	30272443	10.1021/acs.biochem.8b00900
2018	Xu, Q.	Zhang, C. Y.	A universal DNAzyme-based bioluminescent sensor for label-free detection of biomolecules	30392672	10.1016/j.aca.2018.08.059
2018	Gu, L.	Liu, J.	Reselection yielding a smaller and more active silver-specific DNAzyme	31458180	10.1021/acsomega.8b02039
2019	Dastjerdi-Khorzoghi, P.	Javadi-Zarnaghi, F	Targeting a viral DNA sequence with a deoxyribozyme in a preparative scale	31377192	10.1016/j.biochi.2019.07.022
2019	Ma, L.	Liu, J.	An in Vitro-Selected DNAzyme Mutant Highly Specific for Na under Slightly Acidic Conditions.	29989277	10.1002/cbic.201800322
2019	Wang, Y.	Yu, H.	A Novel small RNA-Cleaving Deoxyribozyme with a short Binding Arm	31160698	10.1038/s41598-019-44750-x
2019	Xiao, L.	Xiang, Y.	Orthogonal Activation of RNA-Cleaving DNAzymes in Live Cells by Reactive Oxygen Species	31314942	10.1002/anie.201908105
2019	Memon, A. G.	He, M.	Label-free colorimetric nanosensor with improved sensitivity for Pb2 + in water by using a truncated 8–17 DNAzyme		10.1007/s11783-019-1094-7
2019	Winczura, K.	Grzechnik, P.	DNAzyme-dependent Analysis of rRNA 2’-O-Methylation	31566620	10.3791/59700
2019	Ven, K.	Lammertyn, J.	Re-engineering 10-23 core DNA- and MNAzymes for applications at standard room temperature	30341659	10.1007/s00216-018-1429-4
2019	Ma, L.	Liu, J.	From general base to general acid catalysis in a sodium-specific DNAzyme by a guanine-to-adenine mutation	31276580	10.1093/nar/gkz578
2019	Shomali, Z.	Kompany-Zareh, M.	Fluorescence Based Investigation of Temperature-Dependent Pb2+-Specific 8–17E DNAzyme Catalytic Sensor	30778897	10.1007/s10895-019-02346-8
2019	Aranda, J	Orozco, M	An artificial DNAzyme RNA ligase shows a reaction mechanism resembling that of cellular polymerases		10.1038/s41929-019-0290-y
2019	Mattioli, E	Calvaresi, M	DNAzymes at Work: A DFT Computational Investigation on the Mechanism of 9DB1	30702292	10.1021/acs.jcim.8b00815
2020	Liaqat, A.	Höbartner, C.	N6-isopentenyladenosine in RNA determines the cleavage site of endonuclease deoxyribozymes	32681686	10.1002/anie.202006218
2020	Alon, D.	Elbaz, J.	Engineering a DNAzyme-Based Operon System for the Production of DNA Nanoscaffolds in Living Bacteria	31992039	10.1021/acssynbio.9b00415
2020	Guillen, D.	Ouellet, J.	A simple and affordable kinetic assay of nucleic acids with SYBR Gold gel staining	32126098	10.1371/journal.pone.0229527
2020	Cao, D.	Jiang, D.	Characterization of a DNA-hydrolyzing DNAzyme for generation of PCR strands of unequal length	33022314	10.1016/j.biochi.2020.10.001
2020	Yu, W.	Jiang, D.	Insight into an Oxidative DNA-Cleaving DNAzyme: Multiple Cofactors, the Catalytic Core Map and a Highly Efficient Variant	33083724	10.1016/j.isci.2020.101555
2020	Rudeejaroonrung, K.	Maruyama, A.	Cationic copolymer enhances 8–17 DNAzyme and MNAzyme activities	32458899	10.1039/d0bm00428f
2020	Du, S.	He, J.	Functionalization of 8-17 DNAzymes modulates catalytic efficiency and divalent metal ion preference	31711763	10.1016/j.bioorg.2019.103401
2020	Dellafiore, M.	Iribarren, A. M.	Core modified 8–17 DNAzymes with 2′-deoxy-2′-C-methylpyrimidine nucleosides	33142406	10.1016/j.bioorg.2020.104328
2020	Dai, S.	Cheng, G.	The Split Primer Ligation-triggered 8-17 DNAzyme Assisted Cascade Rolling Circle Amplification for High Specific Detection of Liver Cancer-involved mRNAs: TK1 and c-myc		10.1002/elan.201900539
2020	Li, Y.	He, J.	A new Pb2+-specifc DNAzyme by revisiting the catalytic core of 10–23 DNAzyme	33038786	10.1016/j.bmc.2020.115796
2020	Hanpanich, O.	Maruyama, A.	Cationic copolymer-chaperoned short-armed 10–23 DNAzymes	31608816	10.1080/15257770.2019.1675168
2020	Du, S.	He, J.	Site-specific functionalization with amino, guanidinium, and imidazolyl groups enabling the activation of 10–23 DNAzyme		10.1039/D0RA02226H
2020	Du, S.	He, J.	2′-Functional group of adenosine in 10–23 DNAzyme promotes catalytic activity	31932223	10.1016/j.bmcl.2020.126961
2020	Scheitl, C. P	Höbartner, C	New Deoxyribozymes for the Native Ligation of RNA.	32796587	10.3390/molecules25163650
2020	Dehghanian, F	Hojati, Z	DMLR: A toolkit for investigation of deoxyribozyme-mediated ligation based on real time PCR	32007270	10.1016/j.bbrc.2020.01.075
2021	Pan, J.	Chen, J.	Dual recognition element-controlled logic DNA circuit for COVID-19 detection based on exonuclease III and DNAzyme	33410447	10.1039/d0cc06799g
2021	Rosenbach, H.	Span, I.	Influence of monovalent metal ions on metal binding and catalytic activity of the 10–23 DNAzyme	33544488	10.1515/hsz-2020-0207
2021	Debiais, M.	Smietana, M.	Boronic Acid‐Mediated Activity Control of Split 10–23 DNAzymes	33058268	10.1002/chem.202004227
2021	Moon, W. J.	Liu, J.	Probing Metal-Dependent Phosphate Binding for the Catalysis of the 17E DNAzyme	34106684	10.1021/acs.biochem.1c00091

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