General Data

RNA Type	tRNA
SOTerm	SO:0000271
Original Source	tdbR00000477
Secondary Structure	(((((((..((((....[..)))).(((((.......))))).....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GACCUCGUKLCGCAAC#GDAGCGCRPCUGABUBCAKAZCAGAAG7CUGCGUGPPCGѢAUCACGUCGGGGUCACCA
Sequence (SHORT NAMES ENCODING)	GACCUCGUpm1Gpm2GCGCAACpGmGpDAGCGCpm2,2GpYCUGApCmUpCmCApm1GApYmCAGAAGpm7GCUGCGUGpYpYCGpm1AAUCACGUCGGGGUCACCA
Sequence (MODOMICS CODE ENCODING)	GACCUCGU2000001551G2000002551GCGCAAC2000090551GG2000008551UAGCGC2000022551G2000009551UCUGA2000090551CU2000090551CCA2000001551GA2000909551UCAGAAG2000007551GCUGCGUG2000009551U2000009551UCG2000001551AAUCACGUCGGGGUCACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GACCUCGUKLCGCAAC--#GD--AGCGCRPCUGABUBCAKAZCAGAAG7CU-------------------GCGUGPPCGѢAUCACGUCGGGGUCACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Alignment	9	10	18	20	26	27	32	34	37	39	45A	54	55	58
Position in the Sequence	9	10	17	19	25	26	31	33	36	38	45	53	54	57
Modification Positions	m1G	m2G	Gm	D	m2,2G	Y	Cm	Cm	m1G	Ym	m7G	Y	Y	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS