General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000521049
Gene ID:	ENSG00000067167
Gene Name:	TRAM1
Sequence (UNICHARACTER ENCODING)	GGGAUGGGAAGUGAAGCCCCAGCGAGCGGCUGCAGCGGGGCCGUGAGGAGCAGCCAGCGGGAGGCGGCGGCGAGUCGGUGAGCAGCUGGGAAGAGCAGAACCGGGGCGGAGCACCUGCAGGCGCGGGCGGCGGCCCCACCAUGGCGAUUCGCAAGAAAAGCЖCCAAGAGCCCCCCAGUGCUGAGCCACGAAUUCGUCCUGCAGAAUCACGCGGACAUCGUCUCCUGUGUGGCGAUGGUCUUCCUGCUGGGGCUCAUGUUUGAGAUAACGGCAAAAGCUUCUAUCAUUUUUGUUACUCUUCAGUACAAUGUCACCCUCCCAGCAACAGAAAAUUAACAGGCGAAUGCACUUCUCCAAAACAAAACACAGCAAGUUUAAUGAAUCUGGUCAGCUUAGUGCGUUCUACCUUUUUGCCUGUGUUUGGGGCACAUUCAUUCUCAUCUCUUGUCUCUACUACUAUGAACAUAACAAUUUUAAUAUUAGAGGAACAUCAAAUUGUCAGCAUGUAACUAUGAUUAAUAUUGUGUCAUUUAAUACACAUUAGAAAAAAGAGCCAUAGAUCUUAGCUCUAAAAGGGAUUUUGAGUUUAUCUGAUUGAAGCAAAUCUAAGAAGAUAUUCCUCGUCAGCUUGUCUACAUUGGUCUPUACCUCUUCCACAUUGCUGGAGCUUACCUUUUGAACUUGAAUCAUCUAGGACUUGUUCUUCUGGUGCUACAUUAUUUUGUUGAAUUUCUUUUCCACAUUUCCCGCCUGUUUUAUUUUAGCAAUGAAAAGUAUCAGAAAGGAUUUUCUCUGUGGGCAGUUCUUUUUGUUUUGGGAAGACUUCUGACUPUAAUUCUUUCAGUACUGACUGUUGGUUUUGGCCUUGCAAGA
Sequence (SHORT NAMES ENCODING)	GGGAUGGGAAGUGAAGCCCCAGCGAGCGGCUGCAGCGGGGCCGUGAGGAGCAGCCAGCGGGAGGCGGCGGCGAGUCGGUGAGCAGCUGGGAAGAGCAGAACCGGGGCGGAGCACCUGCAGGCGCGGGCGGCGGCCCCACCAUGGCGAUUCGCAAGAAAAGCm6ACCAAGAGCCCCCCAGUGCUGAGCCACGAAUUCGUCCUGCAGAAUCACGCGGACAUCGUCUCCUGUGUGGCGAUGGUCUUCCUGCUGGGGCUCAUGUUUGAGAUAACGGCAAAAGCUUCUAUCAUUUUUGUUACUCUUCAGUACAAUGUCACCCUCCCAGCAACAGAAAAUUAACAGGCGAAUGCACUUCUCCAAAACAAAACACAGCAAGUUUAAUGAAUCUGGUCAGCUUAGUGCGUUCUACCUUUUUGCCUGUGUUUGGGGCACAUUCAUUCUCAUCUCUUGUCUCUACUACUAUGAACAUAACAAUUUUAAUAUUAGAGGAACAUCAAAUUGUCAGCAUGUAACUAUGAUUAAUAUUGUGUCAUUUAAUACACAUUAGAAAAAAGAGCCAUAGAUCUUAGCUCUAAAAGGGAUUUUGAGUUUAUCUGAUUGAAGCAAAUCUAAGAAGAUAUUCCUCGUCAGCUUGUCUACAUUGGUCUYUACCUCUUCCACAUUGCUGGAGCUUACCUUUUGAACUUGAAUCAUCUAGGACUUGUUCUUCUGGUGCUACAUUAUUUUGUUGAAUUUCUUUUCCACAUUUCCCGCCUGUUUUAUUUUAGCAAUGAAAAGUAUCAGAAAGGAUUUUCUCUGUGGGCAGUUCUUUUUGUUUUGGGAAGACUUCUGACUYUAAUUCUUUCAGUACUGACUGUUGGUUUUGGCCUUGCAAGA
Sequence (MODOMICS CODE ENCODING)	GGGAUGGGAAGUGAAGCCCCAGCGAGCGGCUGCAGCGGGGCCGUGAGGAGCAGCCAGCGGGAGGCGGCGGCGAGUCGGUGAGCAGCUGGGAAGAGCAGAACCGGGGCGGAGCACCUGCAGGCGCGGGCGGCGGCCCCACCAUGGCGAUUCGCAAGAAAAGC2000000006ACCAAGAGCCCCCCAGUGCUGAGCCACGAAUUCGUCCUGCAGAAUCACGCGGACAUCGUCUCCUGUGUGGCGAUGGUCUUCCUGCUGGGGCUCAUGUUUGAGAUAACGGCAAAAGCUUCUAUCAUUUUUGUUACUCUUCAGUACAAUGUCACCCUCCCAGCAACAGAAAAUUAACAGGCGAAUGCACUUCUCCAAAACAAAACACAGCAAGUUUAAUGAAUCUGGUCAGCUUAGUGCGUUCUACCUUUUUGCCUGUGUUUGGGGCACAUUCAUUCUCAUCUCUUGUCUCUACUACUAUGAACAUAACAAUUUUAAUAUUAGAGGAACAUCAAAUUGUCAGCAUGUAACUAUGAUUAAUAUUGUGUCAUUUAAUACACAUUAGAAAAAAGAGCCAUAGAUCUUAGCUCUAAAAGGGAUUUUGAGUUUAUCUGAUUGAAGCAAAUCUAAGAAGAUAUUCCUCGUCAGCUUGUCUACAUUGGUCU2000000009UUACCUCUUCCACAUUGCUGGAGCUUACCUUUUGAACUUGAAUCAUCUAGGACUUGUUCUUCUGGUGCUACAUUAUUUUGUUGAAUUUCUUUUCCACAUUUCCCGCCUGUUUUAUUUUAGCAAUGAAAAGUAUCAGAAAGGAUUUUCUCUGUGGGCAGUUCUUUUUGUUUUGGGAAGACUUCUGACU2000000009UUAAUUCUUUCAGUACUGACUGUUGGUUUUGGCCUUGCAAGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	162	644	831
Modification Positions	m6A	Y	Y
Genomic Coordinates	8:70608178:-	8:70587141:-	8:70583747:-
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8