General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000519509
Gene ID:	ENSG00000147419
Gene Name:	CCDC25
Sequence (UNICHARACTER ENCODING)	AGUUCCGGGGGCCAGGCGGCCGCCGCGAGUCUGGUAUCCUGAGCUUCGUGAGUUGAGCGCUGCUGCUCCGCGGUGGAGUCACCGCACCGCUCCCGGGAUCAUGGUGUUCUACUUCACCAGCAGCAGCGUUAAUUCAUCUGCCUACACUAUUUACAUGGGAAAAGAUAAAUAUGAAAAUGAAGAUCUGAUCAAGCAUGGCUGGCCUGAAGAUAUCUGGUUUCAUGUGGACAAACUCUCUUCGGCUCAUGUAUACCUUCGAUUACAUAAGGGAGAGAAUAUAGAAGACAPCCCAAAGGAAGUGCUGAUGGACUGUGCCCACCUUGUGAAGGCCAAUAGCAUUCAAGGUAAAAAUUGUGACAGUGGAGAAGAAAGUAAAUGAGAUCCUGAЖCCGAUUAGAAAAGACCAAAGUCGAGCGGUUCCCAGACCUAGCAGCAGAGAAAGAAUGCAGAGAUCGUGAAGAGAGGAAUGAGAAAAAAGCCCAAAUUCAGGAAAUGAAAAAGAGAGAAAAAGAAGAAAUGAAGAAGAAGAGGGAAAUGGAUGAACUUAGGAGCUAUUCAUCACUAAUGAAAGUUGAAAAUAUGUCUUCAAAUCAGGAUGGCAAUGAUUCAGAUGAAUUCAUGUAAAAGGAGAAAAGGAGAAAAGGACCUUUGAAAGAUGUGAAUGUAGAGЖCAAUUGCAGACCUUUUGGUUUCAUCUGUGUUCUGAAAUAUAAAAUACAACCAAAAUUCUACCUUCAPCCUACCCAGAAAUUAUUGAUUUUCAAGUUUUAAAAAAAUUGUACCUUUUUUGCUGACAGAAAAGGAUCAGAUAUGUAUAAAAUAGUUGAACUUGACAGCAUAUAЖCUUAAAGUGAAAAUGUUUUUGCCAGAACAUGUCUUGGUACCUUGUGAAAGCAGGCUGCCCUUGUUCUUGAGAUAGЖCUPUAAAAUGAACCAGCUCUGAAAAGUACUUCUGCUGCUCUGGUCUAUCCCUGAAAACAG
Sequence (SHORT NAMES ENCODING)	AGUUCCGGGGGCCAGGCGGCCGCCGCGAGUCUGGUAUCCUGAGCUUCGUGAGUUGAGCGCUGCUGCUCCGCGGUGGAGUCACCGCACCGCUCCCGGGAUCAUGGUGUUCUACUUCACCAGCAGCAGCGUUAAUUCAUCUGCCUACACUAUUUACAUGGGAAAAGAUAAAUAUGAAAAUGAAGAUCUGAUCAAGCAUGGCUGGCCUGAAGAUAUCUGGUUUCAUGUGGACAAACUCUCUUCGGCUCAUGUAUACCUUCGAUUACAUAAGGGAGAGAAUAUAGAAGACAYCCCAAAGGAAGUGCUGAUGGACUGUGCCCACCUUGUGAAGGCCAAUAGCAUUCAAGGUAAAAAUUGUGACAGUGGAGAAGAAAGUAAAUGAGAUCCUGAm6ACCGAUUAGAAAAGACCAAAGUCGAGCGGUUCCCAGACCUAGCAGCAGAGAAAGAAUGCAGAGAUCGUGAAGAGAGGAAUGAGAAAAAAGCCCAAAUUCAGGAAAUGAAAAAGAGAGAAAAAGAAGAAAUGAAGAAGAAGAGGGAAAUGGAUGAACUUAGGAGCUAUUCAUCACUAAUGAAAGUUGAAAAUAUGUCUUCAAAUCAGGAUGGCAAUGAUUCAGAUGAAUUCAUGUAAAAGGAGAAAAGGAGAAAAGGACCUUUGAAAGAUGUGAAUGUAGAGm6ACAAUUGCAGACCUUUUGGUUUCAUCUGUGUUCUGAAAUAUAAAAUACAACCAAAAUUCUACCUUCAYCCUACCCAGAAAUUAUUGAUUUUCAAGUUUUAAAAAAAUUGUACCUUUUUUGCUGACAGAAAAGGAUCAGAUAUGUAUAAAAUAGUUGAACUUGACAGCAUAUAm6ACUUAAAGUGAAAAUGUUUUUGCCAGAACAUGUCUUGGUACCUUGUGAAAGCAGGCUGCCCUUGUUCUUGAGAUAGm6ACUYUAAAAUGAACCAGCUCUGAAAAGUACUUCUGCUGCUCUGGUCUAUCCCUGAAAACAG
Sequence (MODOMICS CODE ENCODING)	AGUUCCGGGGGCCAGGCGGCCGCCGCGAGUCUGGUAUCCUGAGCUUCGUGAGUUGAGCGCUGCUGCUCCGCGGUGGAGUCACCGCACCGCUCCCGGGAUCAUGGUGUUCUACUUCACCAGCAGCAGCGUUAAUUCAUCUGCCUACACUAUUUACAUGGGAAAAGAUAAAUAUGAAAAUGAAGAUCUGAUCAAGCAUGGCUGGCCUGAAGAUAUCUGGUUUCAUGUGGACAAACUCUCUUCGGCUCAUGUAUACCUUCGAUUACAUAAGGGAGAGAAUAUAGAAGACA2000000009UCCCAAAGGAAGUGCUGAUGGACUGUGCCCACCUUGUGAAGGCCAAUAGCAUUCAAGGUAAAAAUUGUGACAGUGGAGAAGAAAGUAAAUGAGAUCCUGA2000000006ACCGAUUAGAAAAGACCAAAGUCGAGCGGUUCCCAGACCUAGCAGCAGAGAAAGAAUGCAGAGAUCGUGAAGAGAGGAAUGAGAAAAAAGCCCAAAUUCAGGAAAUGAAAAAGAGAGAAAAAGAAGAAAUGAAGAAGAAGAGGGAAAUGGAUGAACUUAGGAGCUAUUCAUCACUAAUGAAAGUUGAAAAUAUGUCUUCAAAUCAGGAUGGCAAUGAUUCAGAUGAAUUCAUGUAAAAGGAGAAAAGGAGAAAAGGACCUUUGAAAGAUGUGAAUGUAGAG2000000006ACAAUUGCAGACCUUUUGGUUUCAUCUGUGUUCUGAAAUAUAAAAUACAACCAAAAUUCUACCUUCA2000000009UCCUACCCAGAAAUUAUUGAUUUUCAAGUUUUAAAAAAAUUGUACCUUUUUUGCUGACAGAAAAGGAUCAGAUAUGUAUAAAAUAGUUGAACUUGACAGCAUAUA2000000006ACUUAAAGUGAAAAUGUUUUUGCCAGAACAUGUCUUGGUACCUUGUGAAAGCAGGCUGCCCUUGUUCUUGAGAUAG2000000006ACU2000000009UUAAAAUGAACCAGCUCUGAAAAGUACUUCUGCUGCUCUGGUCUAUCCCUGAAAACAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	288	388	669	736	841	917	920
Modification Positions	Y	m6A	m6A	Y	m6A	m6A	Y
Genomic Coordinates	8:27752568:-	8:27748236:-	8:27736170:-	8:27736103:-	8:27735998:-	8:27735922:-	8:27735919:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8