General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000688452
Gene ID:	ENSG00000147316
Gene Name:	MCPH1
Sequence (UNICHARACTER ENCODING)	AGGCUCGCAAGCACCGCGUAGGCCAGCUGGCCGGAUCCCGCCGUCUGUCAUGGCGGCCCCCAUCCUGAAAGAUGUAGUGGCCUAUGUUGAAGUGUGGUCAUCCAAUGGAACAGAAAAUUAUUCAAAGACAUUUACAACACAGCUUGUGGAUAUGGGGGCAAAGGUUUCAAAAACUUUUAACAAACAAGUAACUCACGUUAUCUUCAAAGAUGGCUACCAGAGCACUUGGGACAAAGCUCAGAAGAGAGGCGUAAAGCUCGUUUCGGUGCUCUGGGUGGAAAAAUGCAGGACAGCUGGAGCACACAUUGAUGAAUCAUUGUUCCCUGCAGCUAAUAUGAAUGAACACUUAUCAAGCCUAAUUAAAAAAAAAAUGAUGAUGUACCUAUUCUCUUAUUUGAAUCUAAUGGUUCAUUAAUAUAUACUCCCACAAUUGAAAUUAAUAGUAGGCACCACAGCGCAAUGGAGAAGAGAUUACAAGAGAUGAAGGAGAAAAGGGAAAAUCUUUCCCCCACCUCUUCCCAAAUGAUUCAGCAGUCUCAUGAUAAUCCAAGUAACUCUCUGUGUGAAGCACCUUUGAACAUUUCACGUGAUACUUUGUGUUCAGAUGAAUACUUUGCUGGUGGCUUACACUCAUCUUUUGAUGAUCUUUGUGGAAACUCAGGAUGUGGAAAUCAGGAAAGGAAGUUGGAAGGAUCCAUUAAUGACAUUAAAAGUGAUGUGUGUAUUUCUUCACUUGUAUUGAAAGCAAAUAAUAUUCAUUCAUCACCAUCUUUCACUCACCUCGAUAAAUCAAGUCCUCAGAAAUUUCUGAGUAAUCUUUCAAAGGAAGAAAUAAACUUGCAAAGAAAUAUUGCAGGUAAAGUAGUCACCCCUGACCAAAAGCAGGCUGCAGGUAUGUCUCAGGAGACGUUUGAAGAGAAGUAUCGUUUGUCUCCUACCUUAUCUUCAACAAAAGGCCACCUUUUGAUACAUUCAAGACCCAGGAGUUCCUCAGUAAAGAGAAAAAGAGUAUCACAUGGCUCCCAUUCACCUCCGAAGGAAAAAUGCAAGAGAAAGAGGAGCACCAGGAGAUCUAUCAUGCCGAGGCUGCAGCUGUGCAGGUCGGAAGACAGGCUGCAGCACGUGGCGGGЖCCUGCCCUGGAGGCUCUUAGCUGUGGGGAGUCUUCAUAUGAUGЖCUAUUUUUCACCUGAUAAUCUUAAGGAAAGGUAUUCAGAGAAUCUUCCUCCUGAAUCUCAGCUGCCAUCAAGCCCUGCUCAGUUGAGCUGCAGAAGUCUUUCUAAGAAGGAGAGAACAAGCAUAUUUGAAAUGUCUGAUUUUUCCUGCGUUGGCAAAAAAACCAGAЖCAGUUGACAUUACCAAUUUCACAGCAAAAACCAUCUCCAGUCCUCGGAAAACUGGAAAUGGUGAAGGCCGUGCAACUUCGAGUUGCGUGACUUCUGCCCCUGAAGAAGCCCUAAGGUGUUGUAGACAGGCUGGGAAAGAAGACGCAUGCCCAGAGGGAAAUGGCUUUUCUUACACCAUUGAGGACCCUGCUCUUCCAAAAGGЖCAUGAUGAUGAUUUAACUCCUUUGGAAGGAAGCCUUGAAGAAAUGAAAGAAGCGGUUGGUCUGAAAAGCACACAGAACAAAGGUACCACUUCCAAAAUAUCAAACUCCUCUGAAGGCGAAGCCCAGAGUGAACAUGAGCCAUGUUUUAUAGUUGЖCUGUAACAUGGAGACGUCUACAGAAGAGAAGGAAAACUUACCCGGAGGAUACAGUGGAAGUAUGUGAAUCUCCUUUUCCAAGUCACCUUCGCUAAAUAAACAUGUAACAGUGCAUCCAUAUUUUAAAUUUAUCACAACUUUUUCAUAACUUAUUUCCCCAUUUACUCCUCUUUUUACUUAAAGAAUGUGCAUUUGAUCAUUCCAAUGAUAAЖCUCUUUAGGAAUAGAUGACUUGCUGUCUUGUGGAЖCUUCUAGACUUAUUGGUUAAGUCUGUUAGGAAUCUAUUUCUCCAAGЖCUUUUCCUUCUUAUAGGUCAAAAGGAUAAGUAGUCCAUAGUAUGAAUAACUGAGGGGAGUGAAGUCUUUUUCCUUAUUCCAUUGGAGUCUUGGCGCUGCAGCGUGUGUAAAGAUGUAUACGAUAGAGAGUUUUUUAAAACCUAGGUUCUUAAUAGUGAGGCUAUUUAAAGAAAGAAAUUAAGGUAGAUUAAGCCAUCGAUUGUAUCAUAGAGAAAGUGUGAAAAACUACU
Sequence (SHORT NAMES ENCODING)	AGGCUCGCAAGCACCGCGUAGGCCAGCUGGCCGGAUCCCGCCGUCUGUCAUGGCGGCCCCCAUCCUGAAAGAUGUAGUGGCCUAUGUUGAAGUGUGGUCAUCCAAUGGAACAGAAAAUUAUUCAAAGACAUUUACAACACAGCUUGUGGAUAUGGGGGCAAAGGUUUCAAAAACUUUUAACAAACAAGUAACUCACGUUAUCUUCAAAGAUGGCUACCAGAGCACUUGGGACAAAGCUCAGAAGAGAGGCGUAAAGCUCGUUUCGGUGCUCUGGGUGGAAAAAUGCAGGACAGCUGGAGCACACAUUGAUGAAUCAUUGUUCCCUGCAGCUAAUAUGAAUGAACACUUAUCAAGCCUAAUUAAAAAAAAAAUGAUGAUGUACCUAUUCUCUUAUUUGAAUCUAAUGGUUCAUUAAUAUAUACUCCCACAAUUGAAAUUAAUAGUAGGCACCACAGCGCAAUGGAGAAGAGAUUACAAGAGAUGAAGGAGAAAAGGGAAAAUCUUUCCCCCACCUCUUCCCAAAUGAUUCAGCAGUCUCAUGAUAAUCCAAGUAACUCUCUGUGUGAAGCACCUUUGAACAUUUCACGUGAUACUUUGUGUUCAGAUGAAUACUUUGCUGGUGGCUUACACUCAUCUUUUGAUGAUCUUUGUGGAAACUCAGGAUGUGGAAAUCAGGAAAGGAAGUUGGAAGGAUCCAUUAAUGACAUUAAAAGUGAUGUGUGUAUUUCUUCACUUGUAUUGAAAGCAAAUAAUAUUCAUUCAUCACCAUCUUUCACUCACCUCGAUAAAUCAAGUCCUCAGAAAUUUCUGAGUAAUCUUUCAAAGGAAGAAAUAAACUUGCAAAGAAAUAUUGCAGGUAAAGUAGUCACCCCUGACCAAAAGCAGGCUGCAGGUAUGUCUCAGGAGACGUUUGAAGAGAAGUAUCGUUUGUCUCCUACCUUAUCUUCAACAAAAGGCCACCUUUUGAUACAUUCAAGACCCAGGAGUUCCUCAGUAAAGAGAAAAAGAGUAUCACAUGGCUCCCAUUCACCUCCGAAGGAAAAAUGCAAGAGAAAGAGGAGCACCAGGAGAUCUAUCAUGCCGAGGCUGCAGCUGUGCAGGUCGGAAGACAGGCUGCAGCACGUGGCGGGm6ACCUGCCCUGGAGGCUCUUAGCUGUGGGGAGUCUUCAUAUGAUGm6ACUAUUUUUCACCUGAUAAUCUUAAGGAAAGGUAUUCAGAGAAUCUUCCUCCUGAAUCUCAGCUGCCAUCAAGCCCUGCUCAGUUGAGCUGCAGAAGUCUUUCUAAGAAGGAGAGAACAAGCAUAUUUGAAAUGUCUGAUUUUUCCUGCGUUGGCAAAAAAACCAGAm6ACAGUUGACAUUACCAAUUUCACAGCAAAAACCAUCUCCAGUCCUCGGAAAACUGGAAAUGGUGAAGGCCGUGCAACUUCGAGUUGCGUGACUUCUGCCCCUGAAGAAGCCCUAAGGUGUUGUAGACAGGCUGGGAAAGAAGACGCAUGCCCAGAGGGAAAUGGCUUUUCUUACACCAUUGAGGACCCUGCUCUUCCAAAAGGm6ACAUGAUGAUGAUUUAACUCCUUUGGAAGGAAGCCUUGAAGAAAUGAAAGAAGCGGUUGGUCUGAAAAGCACACAGAACAAAGGUACCACUUCCAAAAUAUCAAACUCCUCUGAAGGCGAAGCCCAGAGUGAACAUGAGCCAUGUUUUAUAGUUGm6ACUGUAACAUGGAGACGUCUACAGAAGAGAAGGAAAACUUACCCGGAGGAUACAGUGGAAGUAUGUGAAUCUCCUUUUCCAAGUCACCUUCGCUAAAUAAACAUGUAACAGUGCAUCCAUAUUUUAAAUUUAUCACAACUUUUUCAUAACUUAUUUCCCCAUUUACUCCUCUUUUUACUUAAAGAAUGUGCAUUUGAUCAUUCCAAUGAUAAm6ACUCUUUAGGAAUAGAUGACUUGCUGUCUUGUGGAm6ACUUCUAGACUUAUUGGUUAAGUCUGUUAGGAAUCUAUUUCUCCAAGm6ACUUUUCCUUCUUAUAGGUCAAAAGGAUAAGUAGUCCAUAGUAUGAAUAACUGAGGGGAGUGAAGUCUUUUUCCUUAUUCCAUUGGAGUCUUGGCGCUGCAGCGUGUGUAAAGAUGUAUACGAUAGAGAGUUUUUUAAAACCUAGGUUCUUAAUAGUGAGGCUAUUUAAAGAAAGAAAUUAAGGUAGAUUAAGCCAUCGAUUGUAUCAUAGAGAAAGUGUGAAAAACUACU
Sequence (MODOMICS CODE ENCODING)	AGGCUCGCAAGCACCGCGUAGGCCAGCUGGCCGGAUCCCGCCGUCUGUCAUGGCGGCCCCCAUCCUGAAAGAUGUAGUGGCCUAUGUUGAAGUGUGGUCAUCCAAUGGAACAGAAAAUUAUUCAAAGACAUUUACAACACAGCUUGUGGAUAUGGGGGCAAAGGUUUCAAAAACUUUUAACAAACAAGUAACUCACGUUAUCUUCAAAGAUGGCUACCAGAGCACUUGGGACAAAGCUCAGAAGAGAGGCGUAAAGCUCGUUUCGGUGCUCUGGGUGGAAAAAUGCAGGACAGCUGGAGCACACAUUGAUGAAUCAUUGUUCCCUGCAGCUAAUAUGAAUGAACACUUAUCAAGCCUAAUUAAAAAAAAAAUGAUGAUGUACCUAUUCUCUUAUUUGAAUCUAAUGGUUCAUUAAUAUAUACUCCCACAAUUGAAAUUAAUAGUAGGCACCACAGCGCAAUGGAGAAGAGAUUACAAGAGAUGAAGGAGAAAAGGGAAAAUCUUUCCCCCACCUCUUCCCAAAUGAUUCAGCAGUCUCAUGAUAAUCCAAGUAACUCUCUGUGUGAAGCACCUUUGAACAUUUCACGUGAUACUUUGUGUUCAGAUGAAUACUUUGCUGGUGGCUUACACUCAUCUUUUGAUGAUCUUUGUGGAAACUCAGGAUGUGGAAAUCAGGAAAGGAAGUUGGAAGGAUCCAUUAAUGACAUUAAAAGUGAUGUGUGUAUUUCUUCACUUGUAUUGAAAGCAAAUAAUAUUCAUUCAUCACCAUCUUUCACUCACCUCGAUAAAUCAAGUCCUCAGAAAUUUCUGAGUAAUCUUUCAAAGGAAGAAAUAAACUUGCAAAGAAAUAUUGCAGGUAAAGUAGUCACCCCUGACCAAAAGCAGGCUGCAGGUAUGUCUCAGGAGACGUUUGAAGAGAAGUAUCGUUUGUCUCCUACCUUAUCUUCAACAAAAGGCCACCUUUUGAUACAUUCAAGACCCAGGAGUUCCUCAGUAAAGAGAAAAAGAGUAUCACAUGGCUCCCAUUCACCUCCGAAGGAAAAAUGCAAGAGAAAGAGGAGCACCAGGAGAUCUAUCAUGCCGAGGCUGCAGCUGUGCAGGUCGGAAGACAGGCUGCAGCACGUGGCGGG2000000006ACCUGCCCUGGAGGCUCUUAGCUGUGGGGAGUCUUCAUAUGAUG2000000006ACUAUUUUUCACCUGAUAAUCUUAAGGAAAGGUAUUCAGAGAAUCUUCCUCCUGAAUCUCAGCUGCCAUCAAGCCCUGCUCAGUUGAGCUGCAGAAGUCUUUCUAAGAAGGAGAGAACAAGCAUAUUUGAAAUGUCUGAUUUUUCCUGCGUUGGCAAAAAAACCAGA2000000006ACAGUUGACAUUACCAAUUUCACAGCAAAAACCAUCUCCAGUCCUCGGAAAACUGGAAAUGGUGAAGGCCGUGCAACUUCGAGUUGCGUGACUUCUGCCCCUGAAGAAGCCCUAAGGUGUUGUAGACAGGCUGGGAAAGAAGACGCAUGCCCAGAGGGAAAUGGCUUUUCUUACACCAUUGAGGACCCUGCUCUUCCAAAAGG2000000006ACAUGAUGAUGAUUUAACUCCUUUGGAAGGAAGCCUUGAAGAAAUGAAAGAAGCGGUUGGUCUGAAAAGCACACAGAACAAAGGUACCACUUCCAAAAUAUCAAACUCCUCUGAAGGCGAAGCCCAGAGUGAACAUGAGCCAUGUUUUAUAGUUG2000000006ACUGUAACAUGGAGACGUCUACAGAAGAGAAGGAAAACUUACCCGGAGGAUACAGUGGAAGUAUGUGAAUCUCCUUUUCCAAGUCACCUUCGCUAAAUAAACAUGUAACAGUGCAUCCAUAUUUUAAAUUUAUCACAACUUUUUCAUAACUUAUUUCCCCAUUUACUCCUCUUUUUACUUAAAGAAUGUGCAUUUGAUCAUUCCAAUGAUAA2000000006ACUCUUUAGGAAUAGAUGACUUGCUGUCUUGUGGA2000000006ACUUCUAGACUUAUUGGUUAAGUCUGUUAGGAAUCUAUUUCUCCAAG2000000006ACUUUUCCUUCUUAUAGGUCAAAAGGAUAAGUAGUCCAUAGUAUGAAUAACUGAGGGGAGUGAAGUCUUUUUCCUUAUUCCAUUGGAGUCUUGGCGCUGCAGCGUGUGUAAAGAUGUAUACGAUAGAGAGUUUUUUAAAACCUAGGUUCUUAAUAGUGAGGCUAUUUAAAGAAAGAAAUUAAGGUAGAUUAAGCCAUCGAUUGUAUCAUAGAGAAAGUGUGAAAAACUACU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1131	1175	1342	1545	1700	1912	1947	1994
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	8:6444919:+	8:6444963:+	8:6445130:+	8:6445333:+	8:6445488:+	8:6445700:+	8:6445735:+	8:6445782:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5Nnepx5V7yHo msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	Lny8GcCeVGc9 UKen6WEino9G	6UuHp6YApVKv msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	Lny8GcCeVGc9 UKen6WEino9G