RNA Type | snRNA |
---|---|
SOTerm | SO:0000395 |
Original Source | CP023337 |
Sequence (UNICHARACTER ENCODING) | ¶ʍJACUCUGGUUUCUCUUCAAUGUCGAAUAAAPCUUUC#CCUJUPABPAAAGAUPUCCGUGGAGAGGAACACUCUAAGAGUCUAAAACUAAUUUUUUAGUCAGUCUUGUCGCAAGACUGGGGCCA |
Sequence (SHORT NAMES ENCODING) | m2,2,7GpppNpAmpUmACUCUGGUUUCUCUUCAAUGUCGAAUAAApYCUUUCpGmCCUpUmUpYApCmpYAAAGAUpYUCCGUGGAGAGGAACACUCUAAGAGUCUAAAACUAAUUUUUUAGUCAGUCUUGUCGCAAGACUGGGGCCA |
Sequence (MODOMICS CODE ENCODING) | 2002279553N2000090551A2000090551UACUCUGGUUUCUCUUCAAUGUCGAAUAAA2000009551UCUUUC2000090551GCCU2000090551UU2000009551UA2000090551C2000009551UAAAGAU2000009551UUCCGUGGAGAGGAACACUCUAAGAGUCUAAAACUAAUUUUUUAGUCAGUCUUGUCGCAAGACUGGGGCCA |
Method Classification | Score |
---|---|
Multiple direct experimental evidence | 1 |
Direct experimental evidence | 2 |
Inferred based on indirect experimental evidence | 3 |
Predicted computationally | 4 |
Evidence not yet annotated (Unknown) | 5 |
Irrelevant | 6 |
Position in the alignment | None | 1 | None | 9 | None | 40 | None | 46 | None | 50 | None | 52 | None | 54 | None | 55 | None | 62 | None |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Position in the sequence | 0 | 1 | 1 | 2 | 2 | 32 | 32 | 38 | 38 | 42 | 42 | 44 | 44 | 46 | 46 | 47 | 47 | 54 | 54 |
Modification positions | m2,2,7GpppN | pAm | pAm | pUm | pUm | pY | pY | pGm | pGm | pUm | pUm | pY | pY | pCm | pCm | pY | pY | pY | pY |
Level of Experimental Evidence | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 |
Level of Experimental Reliability | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 |
Source | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS |