General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000430260
Gene ID:	ENSG00000169398
Gene Name:	PTK2
Sequence (UNICHARACTER ENCODING)	AACAGCACAUUCUAGCCUCCAGCCAAGCAGGAAUGUCUUUUUAAACAGUUGAGCAAAUUCCCAGAUUAGAAAGUCUGGUGCACUGAUGUCACUCUUUCCUGAGUAAUUUUUGGGUGGUUGUUUACUGCACACUAUCUACCAGGAGCCUAGAAACUUUGAAUGAGUGUCAUUAUUAGAACUCUAGAGUUGUAGGAAUGUAGGAAGAGCUGUUUGCCACAGUUAGGACGAGGGUUUCAAACUGUCUGCUGAGCCCUGGGGCAUCUGCGUGGAAUGGGAAACUAGCAAAGUCUCGCUUUGGCUGCAUUCUGAGGGGUUUAUGUGAUGGCAAACAGCCAAGAUGAAGAAGCUGCCUAGCAGUCGCUGCAGCGGCUGCAGCGUUAUGUGGGACUUCAGAUAGCUUCUGAGUAGUCAAGCAGUGCACAAUCCUGGAGGAAGAGAAGGCUCAGCAAGAAGAGCGCAUGAGGAUGGAGUCCAGAAGACAGGCCACAGUGUCCUGGGACUCCGGAGGGUCUGAUGAAGCACCGCCCAAGCCCAGCAGACCGGGUUAUCCCAGUCCGAGGUCCAGCGAAGGAUUUUAUCCCAGCCCACAGCACAUGGUACAAACCAAUCAUUACCAGGUUUCUGGCUACCCUGGUUCACAUGGAAUCACAGCCAUGGCUGGCAGCAUCUAUCCAGGUCAGGCAUCUCUUUUGGACCAAACAGAUUCAUGGAAUCAUAGACCUCAGGAGAUAGCAAUGUGGCAGCCCAAUGUGGAGGACUCUACAGUAUUGGACCUGCGAGGGAUUGGGCAAGUGUUGCCAACCCAUCUGAUGGAAGAGCGUCUAAUCCGACAGCAACAGGAAAUGGAAGAAGAUCAGCGCUGGCUGGAAAAAGAGGAAAGAUUUCUGAAACCUGAUGUGAGACUCUCUCGAGGCAGUAUUGACAGGGAGGAUGGAAGUCUUCAGGGUCCGAUUGGAAACCAACAUAUAUAUCAGCCUGUGG#UAAACCAGAUCCUGCAGCUCCACCAAAGAAACCGCCUCGCCCUGGAGCUCCCGGUCAUCUGGGAAGCCUUGCCAGCCUCAGCAGCCCUGCUGACAGCUACAACGAGGGUGUCAAGCUUCAGCCCCAGGAAAUCAGCCCCCCUCCUACUGCCAACCUGGACCGGUCGAAUGAUAAGGUGUACGAGAAUGUGACGGGCCUGGUGAAAGCUGUCAUCGAGAUGUCCAGUAAAAUCCAGCCAGCCCCACCAGAGGAGUAUGUCCCUAUGGUGAAGGAAGUCGGCUUGGCCCUGAGGACAUUAUUGGCCACUGUGGAUGAGЖCCAUUCCCCUCCUACCAGCCAGCACCCACCGAGAGAUUGAGAUGGCACAGAAGCUAUUGAACUCUGACCUGGGUGAGCUCAUCAACAAGAUGAAACUGGCCCAGCAGUAUGUCAUGACCAGCCUCCAGCAAGAGUACAAAAAGCAAAUGCUGACUGCUGCUCACGCCCUGGCUGUGGAUGCCAAAAЖCUUACUCGAUGUCAUUGACCAAGCAAGЖCUGAAAAUGCUUGGGCAGACGAGACCACACUGAGCCUCCCCUAGGAGCACGUCUUGCUACCCUCUUUUGAAGAUGUUCUCUAGCCUUCCACCAGCAGCGAGGAAUUAACCCUGUGUCCUCAGUCGCCAGCACUUACAGCUCCAACUUUUUUGAAUGACCAUCUGGUUGAAAAAUCUUUCUCAUAPAAGUUUAACCACACUUUGAUUUGGGUUCAUUUUUUGUUUUGUUUUUUUCAAUCAUGAUAUUCAGAAAAAUCCAGGAUCCAAAAUGUGGCGUUUUUCUAAGAAUGAAAAUUAUAUGUAAGCUUUUAAGCAUCAUGAAGAЖCAAUUUAUGUUCACAUUAAGAUACGUUCUAAAGGGGGAUGGCCAAGGGGUGACAUCUUAAUUCCUAAACUACCUUAGCUGCAUAGUGGAAGAGGAGAGCAUG
Sequence (SHORT NAMES ENCODING)	AACAGCACAUUCUAGCCUCCAGCCAAGCAGGAAUGUCUUUUUAAACAGUUGAGCAAAUUCCCAGAUUAGAAAGUCUGGUGCACUGAUGUCACUCUUUCCUGAGUAAUUUUUGGGUGGUUGUUUACUGCACACUAUCUACCAGGAGCCUAGAAACUUUGAAUGAGUGUCAUUAUUAGAACUCUAGAGUUGUAGGAAUGUAGGAAGAGCUGUUUGCCACAGUUAGGACGAGGGUUUCAAACUGUCUGCUGAGCCCUGGGGCAUCUGCGUGGAAUGGGAAACUAGCAAAGUCUCGCUUUGGCUGCAUUCUGAGGGGUUUAUGUGAUGGCAAACAGCCAAGAUGAAGAAGCUGCCUAGCAGUCGCUGCAGCGGCUGCAGCGUUAUGUGGGACUUCAGAUAGCUUCUGAGUAGUCAAGCAGUGCACAAUCCUGGAGGAAGAGAAGGCUCAGCAAGAAGAGCGCAUGAGGAUGGAGUCCAGAAGACAGGCCACAGUGUCCUGGGACUCCGGAGGGUCUGAUGAAGCACCGCCCAAGCCCAGCAGACCGGGUUAUCCCAGUCCGAGGUCCAGCGAAGGAUUUUAUCCCAGCCCACAGCACAUGGUACAAACCAAUCAUUACCAGGUUUCUGGCUACCCUGGUUCACAUGGAAUCACAGCCAUGGCUGGCAGCAUCUAUCCAGGUCAGGCAUCUCUUUUGGACCAAACAGAUUCAUGGAAUCAUAGACCUCAGGAGAUAGCAAUGUGGCAGCCCAAUGUGGAGGACUCUACAGUAUUGGACCUGCGAGGGAUUGGGCAAGUGUUGCCAACCCAUCUGAUGGAAGAGCGUCUAAUCCGACAGCAACAGGAAAUGGAAGAAGAUCAGCGCUGGCUGGAAAAAGAGGAAAGAUUUCUGAAACCUGAUGUGAGACUCUCUCGAGGCAGUAUUGACAGGGAGGAUGGAAGUCUUCAGGGUCCGAUUGGAAACCAACAUAUAUAUCAGCCUGUGGGmUAAACCAGAUCCUGCAGCUCCACCAAAGAAACCGCCUCGCCCUGGAGCUCCCGGUCAUCUGGGAAGCCUUGCCAGCCUCAGCAGCCCUGCUGACAGCUACAACGAGGGUGUCAAGCUUCAGCCCCAGGAAAUCAGCCCCCCUCCUACUGCCAACCUGGACCGGUCGAAUGAUAAGGUGUACGAGAAUGUGACGGGCCUGGUGAAAGCUGUCAUCGAGAUGUCCAGUAAAAUCCAGCCAGCCCCACCAGAGGAGUAUGUCCCUAUGGUGAAGGAAGUCGGCUUGGCCCUGAGGACAUUAUUGGCCACUGUGGAUGAGm6ACCAUUCCCCUCCUACCAGCCAGCACCCACCGAGAGAUUGAGAUGGCACAGAAGCUAUUGAACUCUGACCUGGGUGAGCUCAUCAACAAGAUGAAACUGGCCCAGCAGUAUGUCAUGACCAGCCUCCAGCAAGAGUACAAAAAGCAAAUGCUGACUGCUGCUCACGCCCUGGCUGUGGAUGCCAAAAm6ACUUACUCGAUGUCAUUGACCAAGCAAGm6ACUGAAAAUGCUUGGGCAGACGAGACCACACUGAGCCUCCCCUAGGAGCACGUCUUGCUACCCUCUUUUGAAGAUGUUCUCUAGCCUUCCACCAGCAGCGAGGAAUUAACCCUGUGUCCUCAGUCGCCAGCACUUACAGCUCCAACUUUUUUGAAUGACCAUCUGGUUGAAAAAUCUUUCUCAUAYAAGUUUAACCACACUUUGAUUUGGGUUCAUUUUUUGUUUUGUUUUUUUCAAUCAUGAUAUUCAGAAAAAUCCAGGAUCCAAAAUGUGGCGUUUUUCUAAGAAUGAAAAUUAUAUGUAAGCUUUUAAGCAUCAUGAAGAm6ACAAUUUAUGUUCACAUUAAGAUACGUUCUAAAGGGGGAUGGCCAAGGGGUGACAUCUUAAUUCCUAAACUACCUUAGCUGCAUAGUGGAAGAGGAGAGCAUG
Sequence (MODOMICS CODE ENCODING)	AACAGCACAUUCUAGCCUCCAGCCAAGCAGGAAUGUCUUUUUAAACAGUUGAGCAAAUUCCCAGAUUAGAAAGUCUGGUGCACUGAUGUCACUCUUUCCUGAGUAAUUUUUGGGUGGUUGUUUACUGCACACUAUCUACCAGGAGCCUAGAAACUUUGAAUGAGUGUCAUUAUUAGAACUCUAGAGUUGUAGGAAUGUAGGAAGAGCUGUUUGCCACAGUUAGGACGAGGGUUUCAAACUGUCUGCUGAGCCCUGGGGCAUCUGCGUGGAAUGGGAAACUAGCAAAGUCUCGCUUUGGCUGCAUUCUGAGGGGUUUAUGUGAUGGCAAACAGCCAAGAUGAAGAAGCUGCCUAGCAGUCGCUGCAGCGGCUGCAGCGUUAUGUGGGACUUCAGAUAGCUUCUGAGUAGUCAAGCAGUGCACAAUCCUGGAGGAAGAGAAGGCUCAGCAAGAAGAGCGCAUGAGGAUGGAGUCCAGAAGACAGGCCACAGUGUCCUGGGACUCCGGAGGGUCUGAUGAAGCACCGCCCAAGCCCAGCAGACCGGGUUAUCCCAGUCCGAGGUCCAGCGAAGGAUUUUAUCCCAGCCCACAGCACAUGGUACAAACCAAUCAUUACCAGGUUUCUGGCUACCCUGGUUCACAUGGAAUCACAGCCAUGGCUGGCAGCAUCUAUCCAGGUCAGGCAUCUCUUUUGGACCAAACAGAUUCAUGGAAUCAUAGACCUCAGGAGAUAGCAAUGUGGCAGCCCAAUGUGGAGGACUCUACAGUAUUGGACCUGCGAGGGAUUGGGCAAGUGUUGCCAACCCAUCUGAUGGAAGAGCGUCUAAUCCGACAGCAACAGGAAAUGGAAGAAGAUCAGCGCUGGCUGGAAAAAGAGGAAAGAUUUCUGAAACCUGAUGUGAGACUCUCUCGAGGCAGUAUUGACAGGGAGGAUGGAAGUCUUCAGGGUCCGAUUGGAAACCAACAUAUAUAUCAGCCUGUGG2000000090GUAAACCAGAUCCUGCAGCUCCACCAAAGAAACCGCCUCGCCCUGGAGCUCCCGGUCAUCUGGGAAGCCUUGCCAGCCUCAGCAGCCCUGCUGACAGCUACAACGAGGGUGUCAAGCUUCAGCCCCAGGAAAUCAGCCCCCCUCCUACUGCCAACCUGGACCGGUCGAAUGAUAAGGUGUACGAGAAUGUGACGGGCCUGGUGAAAGCUGUCAUCGAGAUGUCCAGUAAAAUCCAGCCAGCCCCACCAGAGGAGUAUGUCCCUAUGGUGAAGGAAGUCGGCUUGGCCCUGAGGACAUUAUUGGCCACUGUGGAUGAG2000000006ACCAUUCCCCUCCUACCAGCCAGCACCCACCGAGAGAUUGAGAUGGCACAGAAGCUAUUGAACUCUGACCUGGGUGAGCUCAUCAACAAGAUGAAACUGGCCCAGCAGUAUGUCAUGACCAGCCUCCAGCAAGAGUACAAAAAGCAAAUGCUGACUGCUGCUCACGCCCUGGCUGUGGAUGCCAAAA2000000006ACUUACUCGAUGUCAUUGACCAAGCAAG2000000006ACUGAAAAUGCUUGGGCAGACGAGACCACACUGAGCCUCCCCUAGGAGCACGUCUUGCUACCCUCUUUUGAAGAUGUUCUCUAGCCUUCCACCAGCAGCGAGGAAUUAACCCUGUGUCCUCAGUCGCCAGCACUUACAGCUCCAACUUUUUUGAAUGACCAUCUGGUUGAAAAAUCUUUCUCAUA2000000009UAAGUUUAACCACACUUUGAUUUGGGUUCAUUUUUUGUUUUGUUUUUUUCAAUCAUGAUAUUCAGAAAAAUCCAGGAUCCAAAAUGUGGCGUUUUUCUAAGAAUGAAAAUUAUAUGUAAGCUUUUAAGCAUCAUGAAGA2000000006ACAAUUUAUGUUCACAUUAAGAUACGUUCUAAAGGGGGAUGGCCAAGGGGUGACAUCUUAAUUCCUAAACUACCUUAGCUGCAUAGUGGAAGAGGAGAGCAUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	982	1299	1486	1514	1699	1838
Modification Positions	Gm	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	8:140675468:-	8:140664952:-	8:140659527:-	8:140659499:-	8:140659314:-	8:140659175:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ S9vNeQQYrhac Yfn77uLS5tv8