General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000641853
Gene ID:	ENSG00000254166
Gene Name:	CASC19
Sequence (UNICHARACTER ENCODING)	AAAGAGACAGAACAAUGUUAUAGGUGAGUGCAUGGACAAUGACCUCAAACAGCUAAGAUUCAAACCCCUGCGUUGAAUGAUUGAAUUGAAAUGAUUCAAUGAGCUAAUGUACAUAAAGCAUCCAGAAUGUUGCCUGGCACAAGGACUGUAUUGUCUGCUAGACCAUUUAUUCAAAGUGGGAGGAUGAUGUUCUAAAAGCCAAUGAUAAAGCUCAUGGCAAUGCAGGGUAUAUCUGAUGGCAUGGAAUGCUUUAGGAUGGCCAAGAUUGCCCAUCAAAUGCCAAGUCACCGAAGUUAUUAAUGGCUCUCCUACUAGGAGCCUGACAUCAUGGUGAGCAUCGAGAAAGGAAUAACCUAAGCUGAAGACACGCCUUUUCAGGAGGCCAAGUUCCACGUUCUGUGCAUGCUUUUGGCGAAAGUCAGGUAAAGCCUCCAGAAAUGCAUGGUCUAUUCUCUCGGЖCCAUAUGGCUGUGGGCAAЖCUCUGGCUUCUUGGAGCCUCCAUUAGCCACCUAGGGAAAGGUAAUUGGCUUUAUGUUUGGCUCCAUCACUGCUGGCGACAAGCUCCACUGCAUUCUCAAGCAGUAGAUGAAAUACAACUGUGCUCCUGAAUGCAGCAAAGGAAAGAGAACCCAACUGGЖCCAGUGUGAAAUUGGGЖCCUUUGGAGGCAAGAAUGCACAUAUUUAUAAAUGAAUAAACAUAAUUUUUCUCUCUUCUUCCCAUUGGCAGCAUAUCUGAAGGCCCUGACUCAACAGUAGUGGGUCUUAAUGCUUGUGCUUGUCCACCCUUCUCGGCAGUGAUUGAUUUCAUUGUUGGCUUGUUUUCAUGACUUGAAUGUGCGAUCUUCAGAGGGCCUAAUUCCUUGCAAGUUCCAUUUGAGGGUGGAAGAGCUAGAACAAGCUAUAACCAGUAGACAACUCCGUGACUCAGGAGCUUAAGCAUGUGЖCUAAUUAGUAAGAAAAAAUGUGGUGAAGAUUUGUAGUUAAUAAGAAGGAAAGAAGAAUCACUGGGGCUAGAAUUAUGCAAGCUUUUGUUUCCUUUUGGGЖCUAUAUCAGAACUAUGAGAGAAGAAAGGCUACCUUUUACCUUUGAGGAAUUUUCAAAGCCUUUUUUUUUUUUUUUGGUUGGUUUGUGACUGACAAAGGGCACAAUUUCAACACCUCAGAAAAAUGCCUCAUCAUUUCCUCUUGUGAAAUCUGGGUGCUUCUGAAUGAAUCCAUGUUAGGAAUGUGUACUUCCAUCCAUUAAAGUCAAUGUCCAGUCUCAUUUUGGGCCAGAGGCUGUUACUAAGUUGUAGUACUGGUGAGAAAAGGЖCAGAGCAUUUACCUUCCCUGGGUAUCCUGUGACCUACAUGUGUCCUUGCAAGGCAGGGAAAUGUUACUAAUUAAGAGCAUAGCCUUUCGUCAGAUGGGUUCAGAUCCUAACACAUCCUCUUUCUGGUUACAGGACAGUCCUCUCUGAGCCUCAGUUUUCUCAUCUCUAAGAUGAGGCUAAUUAUACCUACUUCCCAGGGGGGUACUAAGGAUAAAGUAACAACACAAGAAAAUUUUUUAUCCUUGAUUUUCUUAGCUGGAAAAUUAGGCUAGAAAGACCUCCAUCCUUGGGGUAUUUAAAAUAAAAGGACAAACAUAUGAUGAGUCUAA
Sequence (SHORT NAMES ENCODING)	AAAGAGACAGAACAAUGUUAUAGGUGAGUGCAUGGACAAUGACCUCAAACAGCUAAGAUUCAAACCCCUGCGUUGAAUGAUUGAAUUGAAAUGAUUCAAUGAGCUAAUGUACAUAAAGCAUCCAGAAUGUUGCCUGGCACAAGGACUGUAUUGUCUGCUAGACCAUUUAUUCAAAGUGGGAGGAUGAUGUUCUAAAAGCCAAUGAUAAAGCUCAUGGCAAUGCAGGGUAUAUCUGAUGGCAUGGAAUGCUUUAGGAUGGCCAAGAUUGCCCAUCAAAUGCCAAGUCACCGAAGUUAUUAAUGGCUCUCCUACUAGGAGCCUGACAUCAUGGUGAGCAUCGAGAAAGGAAUAACCUAAGCUGAAGACACGCCUUUUCAGGAGGCCAAGUUCCACGUUCUGUGCAUGCUUUUGGCGAAAGUCAGGUAAAGCCUCCAGAAAUGCAUGGUCUAUUCUCUCGGm6ACCAUAUGGCUGUGGGCAAm6ACUCUGGCUUCUUGGAGCCUCCAUUAGCCACCUAGGGAAAGGUAAUUGGCUUUAUGUUUGGCUCCAUCACUGCUGGCGACAAGCUCCACUGCAUUCUCAAGCAGUAGAUGAAAUACAACUGUGCUCCUGAAUGCAGCAAAGGAAAGAGAACCCAACUGGm6ACCAGUGUGAAAUUGGGm6ACCUUUGGAGGCAAGAAUGCACAUAUUUAUAAAUGAAUAAACAUAAUUUUUCUCUCUUCUUCCCAUUGGCAGCAUAUCUGAAGGCCCUGACUCAACAGUAGUGGGUCUUAAUGCUUGUGCUUGUCCACCCUUCUCGGCAGUGAUUGAUUUCAUUGUUGGCUUGUUUUCAUGACUUGAAUGUGCGAUCUUCAGAGGGCCUAAUUCCUUGCAAGUUCCAUUUGAGGGUGGAAGAGCUAGAACAAGCUAUAACCAGUAGACAACUCCGUGACUCAGGAGCUUAAGCAUGUGm6ACUAAUUAGUAAGAAAAAAUGUGGUGAAGAUUUGUAGUUAAUAAGAAGGAAAGAAGAAUCACUGGGGCUAGAAUUAUGCAAGCUUUUGUUUCCUUUUGGGm6ACUAUAUCAGAACUAUGAGAGAAGAAAGGCUACCUUUUACCUUUGAGGAAUUUUCAAAGCCUUUUUUUUUUUUUUUGGUUGGUUUGUGACUGACAAAGGGCACAAUUUCAACACCUCAGAAAAAUGCCUCAUCAUUUCCUCUUGUGAAAUCUGGGUGCUUCUGAAUGAAUCCAUGUUAGGAAUGUGUACUUCCAUCCAUUAAAGUCAAUGUCCAGUCUCAUUUUGGGCCAGAGGCUGUUACUAAGUUGUAGUACUGGUGAGAAAAGGm6ACAGAGCAUUUACCUUCCCUGGGUAUCCUGUGACCUACAUGUGUCCUUGCAAGGCAGGGAAAUGUUACUAAUUAAGAGCAUAGCCUUUCGUCAGAUGGGUUCAGAUCCUAACACAUCCUCUUUCUGGUUACAGGACAGUCCUCUCUGAGCCUCAGUUUUCUCAUCUCUAAGAUGAGGCUAAUUAUACCUACUUCCCAGGGGGGUACUAAGGAUAAAGUAACAACACAAGAAAAUUUUUUAUCCUUGAUUUUCUUAGCUGGAAAAUUAGGCUAGAAAGACCUCCAUCCUUGGGGUAUUUAAAAUAAAAGGACAAACAUAUGAUGAGUCUAA
Sequence (MODOMICS CODE ENCODING)	AAAGAGACAGAACAAUGUUAUAGGUGAGUGCAUGGACAAUGACCUCAAACAGCUAAGAUUCAAACCCCUGCGUUGAAUGAUUGAAUUGAAAUGAUUCAAUGAGCUAAUGUACAUAAAGCAUCCAGAAUGUUGCCUGGCACAAGGACUGUAUUGUCUGCUAGACCAUUUAUUCAAAGUGGGAGGAUGAUGUUCUAAAAGCCAAUGAUAAAGCUCAUGGCAAUGCAGGGUAUAUCUGAUGGCAUGGAAUGCUUUAGGAUGGCCAAGAUUGCCCAUCAAAUGCCAAGUCACCGAAGUUAUUAAUGGCUCUCCUACUAGGAGCCUGACAUCAUGGUGAGCAUCGAGAAAGGAAUAACCUAAGCUGAAGACACGCCUUUUCAGGAGGCCAAGUUCCACGUUCUGUGCAUGCUUUUGGCGAAAGUCAGGUAAAGCCUCCAGAAAUGCAUGGUCUAUUCUCUCGG2000000006ACCAUAUGGCUGUGGGCAA2000000006ACUCUGGCUUCUUGGAGCCUCCAUUAGCCACCUAGGGAAAGGUAAUUGGCUUUAUGUUUGGCUCCAUCACUGCUGGCGACAAGCUCCACUGCAUUCUCAAGCAGUAGAUGAAAUACAACUGUGCUCCUGAAUGCAGCAAAGGAAAGAGAACCCAACUGG2000000006ACCAGUGUGAAAUUGGG2000000006ACCUUUGGAGGCAAGAAUGCACAUAUUUAUAAAUGAAUAAACAUAAUUUUUCUCUCUUCUUCCCAUUGGCAGCAUAUCUGAAGGCCCUGACUCAACAGUAGUGGGUCUUAAUGCUUGUGCUUGUCCACCCUUCUCGGCAGUGAUUGAUUUCAUUGUUGGCUUGUUUUCAUGACUUGAAUGUGCGAUCUUCAGAGGGCCUAAUUCCUUGCAAGUUCCAUUUGAGGGUGGAAGAGCUAGAACAAGCUAUAACCAGUAGACAACUCCGUGACUCAGGAGCUUAAGCAUGUG2000000006ACUAAUUAGUAAGAAAAAAUGUGGUGAAGAUUUGUAGUUAAUAAGAAGGAAAGAAGAAUCACUGGGGCUAGAAUUAUGCAAGCUUUUGUUUCCUUUUGGG2000000006ACUAUAUCAGAACUAUGAGAGAAGAAAGGCUACCUUUUACCUUUGAGGAAUUUUCAAAGCCUUUUUUUUUUUUUUUGGUUGGUUUGUGACUGACAAAGGGCACAAUUUCAACACCUCAGAAAAAUGCCUCAUCAUUUCCUCUUGUGAAAUCUGGGUGCUUCUGAAUGAAUCCAUGUUAGGAAUGUGUACUUCCAUCCAUUAAAGUCAAUGUCCAGUCUCAUUUUGGGCCAGAGGCUGUUACUAAGUUGUAGUACUGGUGAGAAAAGG2000000006ACAGAGCAUUUACCUUCCCUGGGUAUCCUGUGACCUACAUGUGUCCUUGCAAGGCAGGGAAAUGUUACUAAUUAAGAGCAUAGCCUUUCGUCAGAUGGGUUCAGAUCCUAACACAUCCUCUUUCUGGUUACAGGACAGUCCUCUCUGAGCCUCAGUUUUCUCAUCUCUAAGAUGAGGCUAAUUAUACCUACUUCCCAGGGGGGUACUAAGGAUAAAGUAACAACACAAGAAAAUUUUUUAUCCUUGAUUUUCUUAGCUGGAAAAUUAGGCUAGAAAGACCUCCAUCCUUGGGGUAUUUAAAAUAAAAGGACAAACAUAUGAUGAGUCUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	459	478	637	654	942	1042	1309
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	8:127223501:-	8:127223482:-	8:127223323:-	8:127223306:-	8:127223018:-	8:127222918:-	8:127222651:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML dknfVe6BK8aP	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML dknfVe6BK8aP	6UuHp6YApVKv jNkxUQNx8GRd VL7zkHvkfkoB WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G dknfVe6BK8aP	jNkxUQNx8GRd VL7zkHvkfkoB WdHxkJGRmFxn 93arJtwJmuS9 Lny8GcCeVGc9 UKen6WEino9G dknfVe6BK8aP	6UuHp6YApVKv jNkxUQNx8GRd QpiKdbVikVz2 VL7zkHvkfkoB WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G