General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000400228
Gene ID:	ENSG00000088387
Gene Name:	DOCK9
Sequence (UNICHARACTER ENCODING)	UUUUAAGAACCAGCUCCUGGCCGACCAUGGACAUAAUCCUCUCAUGAAAAAAGUUUUUGAUGUCUACCUGUGUUUUCUUCAAAAACAUCAGUCUGAAACGGCUUUAAAAAAUGUCUUCACUGCCUUAAGGUCCUUAAUUUAUAAGUUUCCCUCAACAUUCUAUGAAGGGAGAGCGGACAUGUGUGCGGCUCUGUGUUACGAGAUUCUCAAGUGCUGUAACUCCAAGCUGAGCUCCAUCAGGACGGAGGCCUCCCAGCUGCUCUACUUCCUGAUGAGGAACAACUUUGAUUACACUGGAAAGAAGUCCUUUGUCCGGACACAUUUGCAAGUCAUCAUAUCUGUCAGCCAGCUGAUAGCAGACGUUGUUGGCAUUGGGGGAACCAGAUUCCAGCAGUCCCUGUCCAUCAUCAACAACUGUGCCAACAGUGACCGGCUUAUUAAGCACACCAGCUUCUCCUCUGAUGUGAAGGACUUAACCAAAAGGAUACGCACGGUGCUAAUGGCCACCGCCCAGAUGAAGGAGCAUGAGAACGACCCAGAGAUGCUGGUGGACCUCCAGUACAGCCUGGCCAAAUCCUAUGCCAGCACGCCCGAGCUCAGGAAGACGUGGCUCGACAGCAUGGCCAGGAUCCAUGUCAAAAAUGGCGAUCUCUCAGAGGCAGCAAUGUGCUAUGUCCACGUAACAGCCCUAGUGGCAGAAUAUCUCACACGGAAAGGCGUGUUUAGACAAGGAUGCACCGCCUUCAGGGUCAUUACCCCAAACAUCGACGAGGAGGCCUCCAUGAUGGAAGACGUGGGGAUGCAGGAUGUCCAUUUCAACGAGGAUGUGCUGAUGGAGCUCCUUGAGCAGUGCGCAGAUGGACUCUGGAAAGCCGAGCGCUACGAGCUCAUCGCCGACAUCUACAAACUUAUCAUCCCCAUUUAUGAGAAGCGGAGGGAUUUUGAGAGGCUGGCCCAUCUGUAUGACACGCUGCACCGGGCCUACAGCAAAGUGACCGAGGUCAUGCACUCGGGCCGCAGGCUUCUGGGGACCUACUUCCGGGUAGCCUUCUUCGGGCAGCAAUACCAGUUUACAGACAGUGAAACAGAUGUGGAGGGAUUCUUUGAAGAUGAAGAUGGAAAGGAGUAUAUUUACAAGGAACCCAAACUCACACCGCUGUCGGAAAUUUCUCAGAGACUCCUUAAACUGUACUCGGAUAAAUUUGGUUCUGAAAAUGUCAAAAUGAUACAGGAUUCUGGCAAGGUCAACCCUAAGGAUCUGGAUUCUAAGUAUGCAUACAUCCAGGUGACUCACGUCAUCCCCUUCUUUGACGAAAAAGAGUUGCAAGAAAGGAAAACAGAGUUUGAGAGAUCCCACAACAUCCGCCGCUUCAUGUUUGAGAUGCCAUUUACGCAGACCGGGAAGAGGCAGGGCGGGGUGGAAGAGCAGUGCAAACGGCGCACCAUCCUGACAGCCAUACACUGCUUCCCUUAUGUGAAGAAGCGCAUCCCUGUCAUGUACCAGCACCACACUGACCUGAACCCCAUCGAGGUGGCCAUUGACGAGAUGAGUAAGAAGGUGGCGGAGCUCCGGCAGCUGUGCUCCUCGGCCGAGGUGGACAUGAUCAAACUGCAGCUCAAACUCCAGGGCAGCGUGAGUGUUCAGGUCAAUGCUGGCCCACUAGCAUAUGCGCGAGCUUUCUUAGAUGAUACAAACACAAAGCGAUAUCCUGACAAUAAAGUGAAGCUGCUUAAGGAAGUUUUCAGGCAAUUUGUGGAAGCUUGCGGUCAAGCCUUAGCGGUAAACGAACGUCUGAUUAAAGAAGACCAGCUCGAGUAUCAGGAAGAAAUGAAAGCCAACUACAGGGAAAUGGCGAAGGAGCUUUCUGAAAUCAUGCAUGAGCAGAUCUGCCCCCUGGAGGAGAAGACGAGCGUCUUACCGAAUUCCCUUCACAUCUUCAACGCCAUCAGUGGGACUCCAACAAGCACAAUGGUUCACGGGAUGACCAGCUCGUCUUCGGUCGUGUGAUUACAUCUCAUGGCCCGUGUGUGGGGЖCUUGCUUUGUCAUUUGCAAACUCAGGAUGCUUUCCAAAGCCAAUCACUGGGGAGACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAGAAAGGAAAUAAAGAACAACGUUAUUUCUUAACAGACUUUCUAUAGGAGUUGUAAGAAGGUGCACAUAUUUUUUUAAAUCUCACUGGCAAUAUUCAAAGUUUUCAUUGUGUCUUAACAAAGGUGUGGUAGACACUCUUGAGCUGGACUUAGAUUUUAUUCUUCCUUGCAGAGUAGUGUUAGAAUAGAUGGCCUACAGAAAAAAAAGGUUCUGGGAUCUACAUGGCAGGGAGGGCUGCACUGACAUUGAUGCCUGGGGGACCUUUUGCCUCGAGGCUGAGCUGGAAAAUCUUGAAAAUAUUUUUUUUUUCCUGUGGCACAUUCAGGUUGAAUACAAGAACUAUUUUUGUGACUAGUUUUUGAUGACCUAAGGGAACUGACCAUUGUAAUUUUUGUACCAGUGAACCAGGAGAUUUAGUGCUUUUAUAUUCAUUUCCUUGCAUUUAAGAAAAUAUGAAAGCUUAAGGAAUUAUGUGAGCUUAAAACUAGUCAAGCAGUUUAGAACCAAAGGCCUAUAUUAAUAACCGCAACUAUGCUGAAAAGUACAAAGUAGUACAGUAUAUUGUUAUGUACAUAUCAUUGUUAAUACAGUCCUGGCAUUCUGUACAUAUAUGUAUUACAUUUCUACAUUUUUAAUACUCACAUGGGCUUAUGCAUUAAGUUUAAUUGUGAUAAAUUUGUGCUGUUCCAGUAUAUGCAAUACACUPUAAUGUUUUAUUCUUGUACAUAAAAAUGUGCAAUAUGGAGAUGUAUACAGUCUUUACUAUAUUAGGUUUAUAAЖCAGUUUUAAGAAUUUCAUCCUUUUGCCAAAAUGGUGGAGUAUGUAAUUGGUAAAUCAUAAAUCCUGUGGUGAAUGGUGGUGUACUUUAAAGCUGUCACCAUGUUAUAUUUUCUUUUAAGACUPUAAUUUAGUAAUUUUAUAUUUGGGAAAAUAAAGGUUUUUAAUUUUAUUUAACUGGAAUCACUGCCCUGCUGUAAUUAAACAUUCUGUACCACAUCUGUAUUAAAAAGACAUUGCUGACCAUU
Sequence (SHORT NAMES ENCODING)	UUUUAAGAACCAGCUCCUGGCCGACCAUGGACAUAAUCCUCUCAUGAAAAAAGUUUUUGAUGUCUACCUGUGUUUUCUUCAAAAACAUCAGUCUGAAACGGCUUUAAAAAAUGUCUUCACUGCCUUAAGGUCCUUAAUUUAUAAGUUUCCCUCAACAUUCUAUGAAGGGAGAGCGGACAUGUGUGCGGCUCUGUGUUACGAGAUUCUCAAGUGCUGUAACUCCAAGCUGAGCUCCAUCAGGACGGAGGCCUCCCAGCUGCUCUACUUCCUGAUGAGGAACAACUUUGAUUACACUGGAAAGAAGUCCUUUGUCCGGACACAUUUGCAAGUCAUCAUAUCUGUCAGCCAGCUGAUAGCAGACGUUGUUGGCAUUGGGGGAACCAGAUUCCAGCAGUCCCUGUCCAUCAUCAACAACUGUGCCAACAGUGACCGGCUUAUUAAGCACACCAGCUUCUCCUCUGAUGUGAAGGACUUAACCAAAAGGAUACGCACGGUGCUAAUGGCCACCGCCCAGAUGAAGGAGCAUGAGAACGACCCAGAGAUGCUGGUGGACCUCCAGUACAGCCUGGCCAAAUCCUAUGCCAGCACGCCCGAGCUCAGGAAGACGUGGCUCGACAGCAUGGCCAGGAUCCAUGUCAAAAAUGGCGAUCUCUCAGAGGCAGCAAUGUGCUAUGUCCACGUAACAGCCCUAGUGGCAGAAUAUCUCACACGGAAAGGCGUGUUUAGACAAGGAUGCACCGCCUUCAGGGUCAUUACCCCAAACAUCGACGAGGAGGCCUCCAUGAUGGAAGACGUGGGGAUGCAGGAUGUCCAUUUCAACGAGGAUGUGCUGAUGGAGCUCCUUGAGCAGUGCGCAGAUGGACUCUGGAAAGCCGAGCGCUACGAGCUCAUCGCCGACAUCUACAAACUUAUCAUCCCCAUUUAUGAGAAGCGGAGGGAUUUUGAGAGGCUGGCCCAUCUGUAUGACACGCUGCACCGGGCCUACAGCAAAGUGACCGAGGUCAUGCACUCGGGCCGCAGGCUUCUGGGGACCUACUUCCGGGUAGCCUUCUUCGGGCAGCAAUACCAGUUUACAGACAGUGAAACAGAUGUGGAGGGAUUCUUUGAAGAUGAAGAUGGAAAGGAGUAUAUUUACAAGGAACCCAAACUCACACCGCUGUCGGAAAUUUCUCAGAGACUCCUUAAACUGUACUCGGAUAAAUUUGGUUCUGAAAAUGUCAAAAUGAUACAGGAUUCUGGCAAGGUCAACCCUAAGGAUCUGGAUUCUAAGUAUGCAUACAUCCAGGUGACUCACGUCAUCCCCUUCUUUGACGAAAAAGAGUUGCAAGAAAGGAAAACAGAGUUUGAGAGAUCCCACAACAUCCGCCGCUUCAUGUUUGAGAUGCCAUUUACGCAGACCGGGAAGAGGCAGGGCGGGGUGGAAGAGCAGUGCAAACGGCGCACCAUCCUGACAGCCAUACACUGCUUCCCUUAUGUGAAGAAGCGCAUCCCUGUCAUGUACCAGCACCACACUGACCUGAACCCCAUCGAGGUGGCCAUUGACGAGAUGAGUAAGAAGGUGGCGGAGCUCCGGCAGCUGUGCUCCUCGGCCGAGGUGGACAUGAUCAAACUGCAGCUCAAACUCCAGGGCAGCGUGAGUGUUCAGGUCAAUGCUGGCCCACUAGCAUAUGCGCGAGCUUUCUUAGAUGAUACAAACACAAAGCGAUAUCCUGACAAUAAAGUGAAGCUGCUUAAGGAAGUUUUCAGGCAAUUUGUGGAAGCUUGCGGUCAAGCCUUAGCGGUAAACGAACGUCUGAUUAAAGAAGACCAGCUCGAGUAUCAGGAAGAAAUGAAAGCCAACUACAGGGAAAUGGCGAAGGAGCUUUCUGAAAUCAUGCAUGAGCAGAUCUGCCCCCUGGAGGAGAAGACGAGCGUCUUACCGAAUUCCCUUCACAUCUUCAACGCCAUCAGUGGGACUCCAACAAGCACAAUGGUUCACGGGAUGACCAGCUCGUCUUCGGUCGUGUGAUUACAUCUCAUGGCCCGUGUGUGGGGm6ACUUGCUUUGUCAUUUGCAAACUCAGGAUGCUUUCCAAAGCCAAUCACUGGGGAGACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAGAAAGGAAAUAAAGAACAACGUUAUUUCUUAACAGACUUUCUAUAGGAGUUGUAAGAAGGUGCACAUAUUUUUUUAAAUCUCACUGGCAAUAUUCAAAGUUUUCAUUGUGUCUUAACAAAGGUGUGGUAGACACUCUUGAGCUGGACUUAGAUUUUAUUCUUCCUUGCAGAGUAGUGUUAGAAUAGAUGGCCUACAGAAAAAAAAGGUUCUGGGAUCUACAUGGCAGGGAGGGCUGCACUGACAUUGAUGCCUGGGGGACCUUUUGCCUCGAGGCUGAGCUGGAAAAUCUUGAAAAUAUUUUUUUUUUCCUGUGGCACAUUCAGGUUGAAUACAAGAACUAUUUUUGUGACUAGUUUUUGAUGACCUAAGGGAACUGACCAUUGUAAUUUUUGUACCAGUGAACCAGGAGAUUUAGUGCUUUUAUAUUCAUUUCCUUGCAUUUAAGAAAAUAUGAAAGCUUAAGGAAUUAUGUGAGCUUAAAACUAGUCAAGCAGUUUAGAACCAAAGGCCUAUAUUAAUAACCGCAACUAUGCUGAAAAGUACAAAGUAGUACAGUAUAUUGUUAUGUACAUAUCAUUGUUAAUACAGUCCUGGCAUUCUGUACAUAUAUGUAUUACAUUUCUACAUUUUUAAUACUCACAUGGGCUUAUGCAUUAAGUUUAAUUGUGAUAAAUUUGUGCUGUUCCAGUAUAUGCAAUACACUYUAAUGUUUUAUUCUUGUACAUAAAAAUGUGCAAUAUGGAGAUGUAUACAGUCUUUACUAUAUUAGGUUUAUAAm6ACAGUUUUAAGAAUUUCAUCCUUUUGCCAAAAUGGUGGAGUAUGUAAUUGGUAAAUCAUAAAUCCUGUGGUGAAUGGUGGUGUACUUUAAAGCUGUCACCAUGUUAUAUUUUCUUUUAAGACUYUAAUUUAGUAAUUUUAUAUUUGGGAAAAUAAAGGUUUUUAAUUUUAUUUAACUGGAAUCACUGCCCUGCUGUAAUUAAACAUUCUGUACCACAUCUGUAUUAAAAAGACAUUGCUGACCAUU
Sequence (MODOMICS CODE ENCODING)	UUUUAAGAACCAGCUCCUGGCCGACCAUGGACAUAAUCCUCUCAUGAAAAAAGUUUUUGAUGUCUACCUGUGUUUUCUUCAAAAACAUCAGUCUGAAACGGCUUUAAAAAAUGUCUUCACUGCCUUAAGGUCCUUAAUUUAUAAGUUUCCCUCAACAUUCUAUGAAGGGAGAGCGGACAUGUGUGCGGCUCUGUGUUACGAGAUUCUCAAGUGCUGUAACUCCAAGCUGAGCUCCAUCAGGACGGAGGCCUCCCAGCUGCUCUACUUCCUGAUGAGGAACAACUUUGAUUACACUGGAAAGAAGUCCUUUGUCCGGACACAUUUGCAAGUCAUCAUAUCUGUCAGCCAGCUGAUAGCAGACGUUGUUGGCAUUGGGGGAACCAGAUUCCAGCAGUCCCUGUCCAUCAUCAACAACUGUGCCAACAGUGACCGGCUUAUUAAGCACACCAGCUUCUCCUCUGAUGUGAAGGACUUAACCAAAAGGAUACGCACGGUGCUAAUGGCCACCGCCCAGAUGAAGGAGCAUGAGAACGACCCAGAGAUGCUGGUGGACCUCCAGUACAGCCUGGCCAAAUCCUAUGCCAGCACGCCCGAGCUCAGGAAGACGUGGCUCGACAGCAUGGCCAGGAUCCAUGUCAAAAAUGGCGAUCUCUCAGAGGCAGCAAUGUGCUAUGUCCACGUAACAGCCCUAGUGGCAGAAUAUCUCACACGGAAAGGCGUGUUUAGACAAGGAUGCACCGCCUUCAGGGUCAUUACCCCAAACAUCGACGAGGAGGCCUCCAUGAUGGAAGACGUGGGGAUGCAGGAUGUCCAUUUCAACGAGGAUGUGCUGAUGGAGCUCCUUGAGCAGUGCGCAGAUGGACUCUGGAAAGCCGAGCGCUACGAGCUCAUCGCCGACAUCUACAAACUUAUCAUCCCCAUUUAUGAGAAGCGGAGGGAUUUUGAGAGGCUGGCCCAUCUGUAUGACACGCUGCACCGGGCCUACAGCAAAGUGACCGAGGUCAUGCACUCGGGCCGCAGGCUUCUGGGGACCUACUUCCGGGUAGCCUUCUUCGGGCAGCAAUACCAGUUUACAGACAGUGAAACAGAUGUGGAGGGAUUCUUUGAAGAUGAAGAUGGAAAGGAGUAUAUUUACAAGGAACCCAAACUCACACCGCUGUCGGAAAUUUCUCAGAGACUCCUUAAACUGUACUCGGAUAAAUUUGGUUCUGAAAAUGUCAAAAUGAUACAGGAUUCUGGCAAGGUCAACCCUAAGGAUCUGGAUUCUAAGUAUGCAUACAUCCAGGUGACUCACGUCAUCCCCUUCUUUGACGAAAAAGAGUUGCAAGAAAGGAAAACAGAGUUUGAGAGAUCCCACAACAUCCGCCGCUUCAUGUUUGAGAUGCCAUUUACGCAGACCGGGAAGAGGCAGGGCGGGGUGGAAGAGCAGUGCAAACGGCGCACCAUCCUGACAGCCAUACACUGCUUCCCUUAUGUGAAGAAGCGCAUCCCUGUCAUGUACCAGCACCACACUGACCUGAACCCCAUCGAGGUGGCCAUUGACGAGAUGAGUAAGAAGGUGGCGGAGCUCCGGCAGCUGUGCUCCUCGGCCGAGGUGGACAUGAUCAAACUGCAGCUCAAACUCCAGGGCAGCGUGAGUGUUCAGGUCAAUGCUGGCCCACUAGCAUAUGCGCGAGCUUUCUUAGAUGAUACAAACACAAAGCGAUAUCCUGACAAUAAAGUGAAGCUGCUUAAGGAAGUUUUCAGGCAAUUUGUGGAAGCUUGCGGUCAAGCCUUAGCGGUAAACGAACGUCUGAUUAAAGAAGACCAGCUCGAGUAUCAGGAAGAAAUGAAAGCCAACUACAGGGAAAUGGCGAAGGAGCUUUCUGAAAUCAUGCAUGAGCAGAUCUGCCCCCUGGAGGAGAAGACGAGCGUCUUACCGAAUUCCCUUCACAUCUUCAACGCCAUCAGUGGGACUCCAACAAGCACAAUGGUUCACGGGAUGACCAGCUCGUCUUCGGUCGUGUGAUUACAUCUCAUGGCCCGUGUGUGGGG2000000006ACUUGCUUUGUCAUUUGCAAACUCAGGAUGCUUUCCAAAGCCAAUCACUGGGGAGACCGAGCACAGGGAGGACCAAGGGGAAGGGGAGAGAAAGGAAAUAAAGAACAACGUUAUUUCUUAACAGACUUUCUAUAGGAGUUGUAAGAAGGUGCACAUAUUUUUUUAAAUCUCACUGGCAAUAUUCAAAGUUUUCAUUGUGUCUUAACAAAGGUGUGGUAGACACUCUUGAGCUGGACUUAGAUUUUAUUCUUCCUUGCAGAGUAGUGUUAGAAUAGAUGGCCUACAGAAAAAAAAGGUUCUGGGAUCUACAUGGCAGGGAGGGCUGCACUGACAUUGAUGCCUGGGGGACCUUUUGCCUCGAGGCUGAGCUGGAAAAUCUUGAAAAUAUUUUUUUUUUCCUGUGGCACAUUCAGGUUGAAUACAAGAACUAUUUUUGUGACUAGUUUUUGAUGACCUAAGGGAACUGACCAUUGUAAUUUUUGUACCAGUGAACCAGGAGAUUUAGUGCUUUUAUAUUCAUUUCCUUGCAUUUAAGAAAAUAUGAAAGCUUAAGGAAUUAUGUGAGCUUAAAACUAGUCAAGCAGUUUAGAACCAAAGGCCUAUAUUAAUAACCGCAACUAUGCUGAAAAGUACAAAGUAGUACAGUAUAUUGUUAUGUACAUAUCAUUGUUAAUACAGUCCUGGCAUUCUGUACAUAUAUGUAUUACAUUUCUACAUUUUUAAUACUCACAUGGGCUUAUGCAUUAAGUUUAAUUGUGAUAAAUUUGUGCUGUUCCAGUAUAUGCAAUACACU2000000009UUAAUGUUUUAUUCUUGUACAUAAAAAUGUGCAAUAUGGAGAUGUAUACAGUCUUUACUAUAUUAGGUUUAUAA2000000006ACAGUUUUAAGAAUUUCAUCCUUUUGCCAAAAUGGUGGAGUAUGUAAUUGGUAAAUCAUAAAUCCUGUGGUGAAUGGUGGUGUACUUUAAAGCUGUCACCAUGUUAUAUUUUCUUUUAAGACU2000000009UUAAUUUAGUAAUUUUAUAUUUGGGAAAAUAAAGGUUUUUAAUUUUAUUUAACUGGAAUCACUGCCCUGCUGUAAUUAAACAUUCUGUACCACAUCUGUAUUAAAAAGACAUUGCUGACCAUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	2035	2828	2902	3025
Modification Positions	m6A	Y	m6A	Y
Genomic Coordinates	13:98794599:-	13:98793806:-	13:98793732:-	13:98793609:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP