General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript Name:	ENST00000643023
Gene Name:	ENSG00000136143
Sequence (UNICHARACTER ENCODING)	GCGCGCGGCGCCGAGGGGACGGGGUCCGACUCAGAAAUGGCGGCCUCCAUGUUCUACGGCAGGCUAGUGGCCGUGGCCACCCUUCGGAЖCCACCGGCCUCGGACGGCCCAGCGGGCUGCUGCUCAGGUUCUGGGAAGUUCUGGAUUGUUUAAUAACCAUGGACUCCAAGUACAGCAGCAACAGCAAAGGAAUCUCUCACUACAUGAAUACAUGAGUAUGGAAUUAUUGCAAGAAGCUGGUGUCUCCGUUCCCAAAGGAUAUGUGGCAAAGUCACCAGAUGAAGCUUAUGCAAUUGCCAAAAAAUUAGGUUCAAAAGAUGUCGUGAUAAAGGCACAGGUUUUAGCUGGUGGUAGAGGAAAAGGAACAUUUGAAAGUGGCCUCAAAGGAGGAGUGAAGAUAGUUUUCUCUCCAGAAGAAGCAAAAGCUGUUUCUUCACAAAUGAUUGGGAAAAAAUUGUUUACCAAGCAAACGGGAGAAAAGGGCAGAAUAUGCAAUCAAGUAUUGGUCUGUGAGCGAAAAUAUCCCAGGAGAGAAUACUACUUUGCAAUAACAAUGGAAAGGUCAUUUCAAGGUCCUGUAUUAAUAGGAAGUUCACAUGGUGGUGUCAACAUUGAAGAUGUUGCUGCUGAGUCUCCUGAAGCAAUAAUUAAAGAACCUAUUGAUAUUGAAGAAGGCAUCAAAAAGGAACAAGCUCUCCAGCUUGCACAGAAGAUGGGAUUUCCACCUAAUAUUGUGGAAUCAGCAGCAGAAAACAUGGUCAAGCUPUACAGCCUUUUUCUGAAAUACGAUGCAACCAUGAUAGAAAUAAAUCCAAUGGUGGAAGAUUCAGAUGGAGCUGGACCACCAGGAUCACACAUUGAAUUGAGUUGUCACAUCCAUUUGACCUGGAACAGAUCUGGAAUAUUGUGUAUGGAUGCAAAGAUCAAUUUUGACUCUAAUUCAGCCUAUCGCCAAAAGAAAAUCUUUGAUCUACAGGACUGGACCCAGGAAGAUGAAAGGGACAAAGAUGCUGCUAAGGCAAAUCUCAACUACAUUGGCCUCGAUGGAAAUAUAGGCUGCCUAGUAAAUGGUGCUGGUUUGGCUAUGGCCACAAUGGAUAUAAUAAAACUUCAUGGAGGGACUCCAGCCAACUUCCUUGAUGUUGGUGGUGGUGCUACAGUCCAUCAAGUAACAGAAGCAUUUAAGCUUAUCACUUCAGAUAAAAAGGUACUGGCUAUUCUGGUCAACAUUUUUGGAGGAAUCAUGCGCUGUGAUGUUAUUGCACAGGGUAUAGUCAUGGCAGUAAAAGACUUGGAAAUUAAAAUACCUGUUGUGGUACGGUUACAAGGUACACGAGUCGAUGAUGCUAAGGCACUGAUAGCGGACAGUGGACUUAAAAUACUUGCUUGUGAUGACUUGGAUGAAGCUGCUAGAAUGGUUGUAAAGCUCUCUGAAAUAGUGACCUUAGCGAAGCAAGCACAUGUGGAUGUGAAAUUUCAGUUGCCAAUAUGAUCUGAAAACCCAGUGGAUGGCUGAAGGUGUUAAAUGUGCUAUAAUCAUUAAGAAUACUGUGUUCUGUGUUAUUGUUCUUUUUCUUUUUAGUGUGUGGAGAUUGUAAUUGCCAUCUAGGCACACAAACAUUUAAAAGGAUPUGGЖCUGCAUUUAAUUGUACCAUUCAGAAUGGЖCUGUUUGUACGAAGCAUGUAUAAUGCAGUUAUCUUCUUUCUUUUGUCGCAGCCAGUCUUUUUUGCUUCUCCUACAAAACGUAЖCUUGCAAUUUGCCAGUUUAUUAUUGUUGGAUACAAAGUUCUUCAUUGAUAAGAGUCCUAUAAAUAAGAUAAAUACGAAGAUAAAGCUPUAUUCUPUAGUGUUAAAAUACAGUAUAUCUAAUAЖCUAGCCUCAUUAGUAGAGCAGUAUAUUAAAACAAUGUUUUAUGUAAAAAGUGUUUAUCUUCAGCACCAAAUACAUGAUAAAUGUAUCAAUCACUAUUUAUAAACAGAGCUUUCAAACACUCCUCAGAAUAUUCUUCUAAGUAUUUUGAUGAAGUAACUUUGUAAUUAUUUGAACAUUGUUUUAAUCAUUAGGAAACACUGAUUAACUGCAAGUCUUCAUGAUUCUGUCAUAUUAAGAAACACCUGUAGGUUUGCUUCAAAUAAAGGCAUAUAUACCAAGGACUUACAGACAAAAUUAAGAAUGUCAAUUUAAGUUAAUAAAAAUCUCCCAA
Sequence (SHORT NAMES ENCODING)	GCGCGCGGCGCCGAGGGGACGGGGUCCGACUCAGAAAUGGCGGCCUCCAUGUUCUACGGCAGGCUAGUGGCCGUGGCCACCCUUCGGAm6ACCACCGGCCUCGGACGGCCCAGCGGGCUGCUGCUCAGGUUCUGGGAAGUUCUGGAUUGUUUAAUAACCAUGGACUCCAAGUACAGCAGCAACAGCAAAGGAAUCUCUCACUACAUGAAUACAUGAGUAUGGAAUUAUUGCAAGAAGCUGGUGUCUCCGUUCCCAAAGGAUAUGUGGCAAAGUCACCAGAUGAAGCUUAUGCAAUUGCCAAAAAAUUAGGUUCAAAAGAUGUCGUGAUAAAGGCACAGGUUUUAGCUGGUGGUAGAGGAAAAGGAACAUUUGAAAGUGGCCUCAAAGGAGGAGUGAAGAUAGUUUUCUCUCCAGAAGAAGCAAAAGCUGUUUCUUCACAAAUGAUUGGGAAAAAAUUGUUUACCAAGCAAACGGGAGAAAAGGGCAGAAUAUGCAAUCAAGUAUUGGUCUGUGAGCGAAAAUAUCCCAGGAGAGAAUACUACUUUGCAAUAACAAUGGAAAGGUCAUUUCAAGGUCCUGUAUUAAUAGGAAGUUCACAUGGUGGUGUCAACAUUGAAGAUGUUGCUGCUGAGUCUCCUGAAGCAAUAAUUAAAGAACCUAUUGAUAUUGAAGAAGGCAUCAAAAAGGAACAAGCUCUCCAGCUUGCACAGAAGAUGGGAUUUCCACCUAAUAUUGUGGAAUCAGCAGCAGAAAACAUGGUCAAGCUYUACAGCCUUUUUCUGAAAUACGAUGCAACCAUGAUAGAAAUAAAUCCAAUGGUGGAAGAUUCAGAUGGAGCUGGACCACCAGGAUCACACAUUGAAUUGAGUUGUCACAUCCAUUUGACCUGGAACAGAUCUGGAAUAUUGUGUAUGGAUGCAAAGAUCAAUUUUGACUCUAAUUCAGCCUAUCGCCAAAAGAAAAUCUUUGAUCUACAGGACUGGACCCAGGAAGAUGAAAGGGACAAAGAUGCUGCUAAGGCAAAUCUCAACUACAUUGGCCUCGAUGGAAAUAUAGGCUGCCUAGUAAAUGGUGCUGGUUUGGCUAUGGCCACAAUGGAUAUAAUAAAACUUCAUGGAGGGACUCCAGCCAACUUCCUUGAUGUUGGUGGUGGUGCUACAGUCCAUCAAGUAACAGAAGCAUUUAAGCUUAUCACUUCAGAUAAAAAGGUACUGGCUAUUCUGGUCAACAUUUUUGGAGGAAUCAUGCGCUGUGAUGUUAUUGCACAGGGUAUAGUCAUGGCAGUAAAAGACUUGGAAAUUAAAAUACCUGUUGUGGUACGGUUACAAGGUACACGAGUCGAUGAUGCUAAGGCACUGAUAGCGGACAGUGGACUUAAAAUACUUGCUUGUGAUGACUUGGAUGAAGCUGCUAGAAUGGUUGUAAAGCUCUCUGAAAUAGUGACCUUAGCGAAGCAAGCACAUGUGGAUGUGAAAUUUCAGUUGCCAAUAUGAUCUGAAAACCCAGUGGAUGGCUGAAGGUGUUAAAUGUGCUAUAAUCAUUAAGAAUACUGUGUUCUGUGUUAUUGUUCUUUUUCUUUUUAGUGUGUGGAGAUUGUAAUUGCCAUCUAGGCACACAAACAUUUAAAAGGAUYUGGm6ACUGCAUUUAAUUGUACCAUUCAGAAUGGm6ACUGUUUGUACGAAGCAUGUAUAAUGCAGUUAUCUUCUUUCUUUUGUCGCAGCCAGUCUUUUUUGCUUCUCCUACAAAACGUAm6ACUUGCAAUUUGCCAGUUUAUUAUUGUUGGAUACAAAGUUCUUCAUUGAUAAGAGUCCUAUAAAUAAGAUAAAUACGAAGAUAAAGCUYUAUUCUYUAGUGUUAAAAUACAGUAUAUCUAAUAm6ACUAGCCUCAUUAGUAGAGCAGUAUAUUAAAACAAUGUUUUAUGUAAAAAGUGUUUAUCUUCAGCACCAAAUACAUGAUAAAUGUAUCAAUCACUAUUUAUAAACAGAGCUUUCAAACACUCCUCAGAAUAUUCUUCUAAGUAUUUUGAUGAAGUAACUUUGUAAUUAUUUGAACAUUGUUUUAAUCAUUAGGAAACACUGAUUAACUGCAAGUCUUCAUGAUUCUGUCAUAUUAAGAAACACCUGUAGGUUUGCUUCAAAUAAAGGCAUAUAUACCAAGGACUUACAGACAAAAUUAAGAAUGUCAAUUUAAGUUAAUAAAAAUCUCCCAA
Sequence (MODOMICS CODE ENCODING)	GCGCGCGGCGCCGAGGGGACGGGGUCCGACUCAGAAAUGGCGGCCUCCAUGUUCUACGGCAGGCUAGUGGCCGUGGCCACCCUUCGGA2000000006ACCACCGGCCUCGGACGGCCCAGCGGGCUGCUGCUCAGGUUCUGGGAAGUUCUGGAUUGUUUAAUAACCAUGGACUCCAAGUACAGCAGCAACAGCAAAGGAAUCUCUCACUACAUGAAUACAUGAGUAUGGAAUUAUUGCAAGAAGCUGGUGUCUCCGUUCCCAAAGGAUAUGUGGCAAAGUCACCAGAUGAAGCUUAUGCAAUUGCCAAAAAAUUAGGUUCAAAAGAUGUCGUGAUAAAGGCACAGGUUUUAGCUGGUGGUAGAGGAAAAGGAACAUUUGAAAGUGGCCUCAAAGGAGGAGUGAAGAUAGUUUUCUCUCCAGAAGAAGCAAAAGCUGUUUCUUCACAAAUGAUUGGGAAAAAAUUGUUUACCAAGCAAACGGGAGAAAAGGGCAGAAUAUGCAAUCAAGUAUUGGUCUGUGAGCGAAAAUAUCCCAGGAGAGAAUACUACUUUGCAAUAACAAUGGAAAGGUCAUUUCAAGGUCCUGUAUUAAUAGGAAGUUCACAUGGUGGUGUCAACAUUGAAGAUGUUGCUGCUGAGUCUCCUGAAGCAAUAAUUAAAGAACCUAUUGAUAUUGAAGAAGGCAUCAAAAAGGAACAAGCUCUCCAGCUUGCACAGAAGAUGGGAUUUCCACCUAAUAUUGUGGAAUCAGCAGCAGAAAACAUGGUCAAGCU2000000009UUACAGCCUUUUUCUGAAAUACGAUGCAACCAUGAUAGAAAUAAAUCCAAUGGUGGAAGAUUCAGAUGGAGCUGGACCACCAGGAUCACACAUUGAAUUGAGUUGUCACAUCCAUUUGACCUGGAACAGAUCUGGAAUAUUGUGUAUGGAUGCAAAGAUCAAUUUUGACUCUAAUUCAGCCUAUCGCCAAAAGAAAAUCUUUGAUCUACAGGACUGGACCCAGGAAGAUGAAAGGGACAAAGAUGCUGCUAAGGCAAAUCUCAACUACAUUGGCCUCGAUGGAAAUAUAGGCUGCCUAGUAAAUGGUGCUGGUUUGGCUAUGGCCACAAUGGAUAUAAUAAAACUUCAUGGAGGGACUCCAGCCAACUUCCUUGAUGUUGGUGGUGGUGCUACAGUCCAUCAAGUAACAGAAGCAUUUAAGCUUAUCACUUCAGAUAAAAAGGUACUGGCUAUUCUGGUCAACAUUUUUGGAGGAAUCAUGCGCUGUGAUGUUAUUGCACAGGGUAUAGUCAUGGCAGUAAAAGACUUGGAAAUUAAAAUACCUGUUGUGGUACGGUUACAAGGUACACGAGUCGAUGAUGCUAAGGCACUGAUAGCGGACAGUGGACUUAAAAUACUUGCUUGUGAUGACUUGGAUGAAGCUGCUAGAAUGGUUGUAAAGCUCUCUGAAAUAGUGACCUUAGCGAAGCAAGCACAUGUGGAUGUGAAAUUUCAGUUGCCAAUAUGAUCUGAAAACCCAGUGGAUGGCUGAAGGUGUUAAAUGUGCUAUAAUCAUUAAGAAUACUGUGUUCUGUGUUAUUGUUCUUUUUCUUUUUAGUGUGUGGAGAUUGUAAUUGCCAUCUAGGCACACAAACAUUUAAAAGGAU2000000009UUGG2000000006ACUGCAUUUAAUUGUACCAUUCAGAAUGG2000000006ACUGUUUGUACGAAGCAUGUAUAAUGCAGUUAUCUUCUUUCUUUUGUCGCAGCCAGUCUUUUUUGCUUCUCCUACAAAACGUA2000000006ACUUGCAAUUUGCCAGUUUAUUAUUGUUGGAUACAAAGUUCUUCAUUGAUAAGAGUCCUAUAAAUAAGAUAAAUACGAAGAUAAAGCU2000000009UUAUUCU2000000009UUAGUGUUAAAAUACAGUAUAUCUAAUA2000000006ACUAGCCUCAUUAGUAGAGCAGUAUAUUAAAACAAUGUUUUAUGUAAAAAGUGUUUAUCUUCAGCACCAAAUACAUGAUAAAUGUAUCAAUCACUAUUUAUAAACAGAGCUUUCAAACACUCCUCAGAAUAUUCUUCUAAGUAUUUUGAUGAAGUAACUUUGUAAUUAUUUGAACAUUGUUUUAAUCAUUAGGAAACACUGAUUAACUGCAAGUCUUCAUGAUUCUGUCAUAUUAAGAAACACCUGUAGGUUUGCUUCAAAUAAAGGCAUAUAUACCAAGGACUUACAGACAAAAUUAAGAAUGUCAAUUUAAGUUAAUAAAAAUCUCCCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the sequence	89	765	1631	1635	1664	1747	1835	1842	1870
Modification positions	m6A	Y	Y	m6A	m6A	m6A	Y	Y	m6A
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM