General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000616833
Gene ID:	ENSG00000102805
Gene Name:	CLN5
Sequence (UNICHARACTER ENCODING)	GCAGCCUGAUGGCGCAGGAGGUAGACACGGCACAGGGCGCCGAGAUGCGGCGGGGCGCGGGCGCGGCUCGGGGACGCGCUUCCUGGUGCUGGGCCCUGGCGCUGCUUUGGCUCGCGGUGGUUCCGGGCUGGUCCCGGGUCUCGGGCAUCCCCUCCCGGCGCCACUGGCCGGUGCCCUACAAGCGCUUUGACUUCCGUCCAAAACCUGAUCCUUAUUGUCAAGCUAAGUAUACUUUCUGUCCAACUGGCUCACCUAUCCCAGUUAUGGAGGGUGAUGAUGACAUUGAAGUUUUUCGAUUACAAGCCCCAGUAUGGGAAUUUAAAUAUGGAGACCUCCUGGGACACUUGAAAAUUAUGCAUGAUGCCAUUGGAUUCAGAAGUACAUUAACUGGCAAGAACUACACAAUGGAAUGGUAUGAЖCUUUUCCAACUUGGCAACUGUACAUUUCCCCAUCUCCGACCUGAAAUGGAUGCCCCUUUCUGGUGUAAUCAAGGCGCUGCCUGCUUUUUUGAGGGAAUUGAUGAUGUUCACUGGAAGGAAAAUGGGACAUUAGUUCAAGUAGCAACUAUAUCAGAAAUAUCUUGUGCCUUGAAGAAUGGAAUAAAAUUGGCUGAGCUUGGAUUCCUGUUGUGAAAUGCAGGAAACAUGUUCAACCAAAUGGCAAAGUGGGUGAAACAGGACAAUGAAACAGGAAUUUAUUAUGAGACAUGGAAUGUAAAAGCCAGCCCAGAAAAGGGGGCAGAGЖCAUGGUUUGAUUCCUACGACUGUUCCAAAUUUGUGUUAAGGЖCCUPUAЖCAAGUUGGCUGAAUUUGGAGCAGAGUUCAAGAACAUAGAAACCAACUAUACAAGAAUAUUUCUUUACAGUGGAGAACCUACUUAUCUGGGAAAUGAAACAUCUGUUUUUGGGCCAACAGGAAACAAGЖCUCUUGGUUUAGCCAUAAAAAGAUUUUAUUACCCCUUCAAЖCCACAUUUGCCAACUAAAGAAUUUCUGUUGAGUCUCUUGCAAAUUUUUGAUGCAGUGAUUGUGCACAAЖCAGUUCUAUUUGUUUUAUAAUUUUGAAUAUUGGUUUUUACCUAUGAAAUUCCCUUUUAUUAAAAUAACAUAUGAAGAAAUCCCUPUACCUAUCAGAAACAAAACACUCUCUGGUUUAUAAAЖCACCUUAAUUCUACUGCUCUUUUUUCUCCAAUCACCAGCAUCUGUUUUUCAGGGGGUGAUUUUACUUUUGUGAAUUCCUUAGCCUUUCUUCCUUGGUGCAUAAAGUUAAAAUGCACAUCAGCAGAAUUGCUGCAUAUUAACAUCUCAGGACUCUUCUCUUGUAAAGAAGCUGAAAUUCGUACUAUAUUGGCCAAAGUGAGCGAGUUAGGUGAUCUUGGUUUCAAUUUCCGAGCCUUUGUUAAUAUGGAGAAUUAUGGUUCAUAUCAGUUAUGUAGGACCUUUGGACCCAGGGUCCUACAGAUAGAUAUGGUGUGCCCAGAUUUUAAAAAUACCUUCAAAAAUAAAAAAUACAUUCAGUGACAUUUUCAUGGUGGGAGCUCUUCUUUCUGAUAUGGCAGUUACACUUUUUCACUUAAGUGCUUUAGUUUAGACUAACUUUACAACUUCUAUAACUUUUGGAACCAAGUUUAGUAUAGUCUGAUUACAUUCCAUUCACCUAACUUUAGACAUUCGUUUAGACACCAUAACUGGAGUGAUUGUGCUUCUAGAUGUGGCAAAUCCAGUGUUAACACAUAUUUCUGGCUGAGAUUUUGGAACUAGCUAGUAACUGGCUUGUGUUCUUUAAGCAUACUAACAUCACUAAAUCUUAGGAUUUAGGAUUGCUGUAAAGAUGUAAGUUGUGUAUGUUUGGCAGGUCACAUUGAAUGGCAGUGAUAAUGAUUAAUCAAAGAACAAAUGUCAUCCUUGAUCUUGCCUAAUGUAGUUUAUGUGCCAAACUUUCCAGGGUUUUGUAGUCACCUAGAUUUUAAGCUGAUAGCAUAGUGCUUCAGCGGUUCUUCUAACCGGGGUAUGCAGGAACAUGGCUGCAGACACGUUUGGGUAAACAGGCACCUUCUGACUUCUUCAUUGUUUCCUGUAGUUCUCCCUCUUCCCACAAAGCUGUCAGCGCAGUGGAAGAGGUUGCACUUCUCCGAGAGAGGACAGGUUUCUGUUAAGAUCACCAAGUAGCUGUGCUUUAAUUAGAGCCAGACAAGCUUUCAAGGUCCUUUAAGUAUUUGAUGAUCAACUGAACACGUUUCUAUUCAAGGAGAAAACACCAUUCAGUAAGAAGAUGGAGUAGAUAUCAGAUAAAACAAUUCACGUUUAAUAUGUAAAUGUACCAAUUAUGUGAUUCAGUUUCAACUUUCAAGUACUUCCUGAGAGGUUAGUACAUUAUUAUUGAGCUCUCACAGAAAGCUUAAUCAUAGAUAUAAUUAACCUGAUCCAAAUGAGUAAAGUGGACCUUAGAAAGGCUAAGUGAUCUUUCUCUGGCUAUCCAGCUAGUAGUAAUGAAGUCAGGUCUUGAACCCCGGUUCUGCUGACUGAAUUGGAUGC
Sequence (SHORT NAMES ENCODING)	GCAGCCUGAUGGCGCAGGAGGUAGACACGGCACAGGGCGCCGAGAUGCGGCGGGGCGCGGGCGCGGCUCGGGGACGCGCUUCCUGGUGCUGGGCCCUGGCGCUGCUUUGGCUCGCGGUGGUUCCGGGCUGGUCCCGGGUCUCGGGCAUCCCCUCCCGGCGCCACUGGCCGGUGCCCUACAAGCGCUUUGACUUCCGUCCAAAACCUGAUCCUUAUUGUCAAGCUAAGUAUACUUUCUGUCCAACUGGCUCACCUAUCCCAGUUAUGGAGGGUGAUGAUGACAUUGAAGUUUUUCGAUUACAAGCCCCAGUAUGGGAAUUUAAAUAUGGAGACCUCCUGGGACACUUGAAAAUUAUGCAUGAUGCCAUUGGAUUCAGAAGUACAUUAACUGGCAAGAACUACACAAUGGAAUGGUAUGAm6ACUUUUCCAACUUGGCAACUGUACAUUUCCCCAUCUCCGACCUGAAAUGGAUGCCCCUUUCUGGUGUAAUCAAGGCGCUGCCUGCUUUUUUGAGGGAAUUGAUGAUGUUCACUGGAAGGAAAAUGGGACAUUAGUUCAAGUAGCAACUAUAUCAGAAAUAUCUUGUGCCUUGAAGAAUGGAAUAAAAUUGGCUGAGCUUGGAUUCCUGUUGUGAAAUGCAGGAAACAUGUUCAACCAAAUGGCAAAGUGGGUGAAACAGGACAAUGAAACAGGAAUUUAUUAUGAGACAUGGAAUGUAAAAGCCAGCCCAGAAAAGGGGGCAGAGm6ACAUGGUUUGAUUCCUACGACUGUUCCAAAUUUGUGUUAAGGm6ACCUYUAm6ACAAGUUGGCUGAAUUUGGAGCAGAGUUCAAGAACAUAGAAACCAACUAUACAAGAAUAUUUCUUUACAGUGGAGAACCUACUUAUCUGGGAAAUGAAACAUCUGUUUUUGGGCCAACAGGAAACAAGm6ACUCUUGGUUUAGCCAUAAAAAGAUUUUAUUACCCCUUCAAm6ACCACAUUUGCCAACUAAAGAAUUUCUGUUGAGUCUCUUGCAAAUUUUUGAUGCAGUGAUUGUGCACAAm6ACAGUUCUAUUUGUUUUAUAAUUUUGAAUAUUGGUUUUUACCUAUGAAAUUCCCUUUUAUUAAAAUAACAUAUGAAGAAAUCCCUYUACCUAUCAGAAACAAAACACUCUCUGGUUUAUAAAm6ACACCUUAAUUCUACUGCUCUUUUUUCUCCAAUCACCAGCAUCUGUUUUUCAGGGGGUGAUUUUACUUUUGUGAAUUCCUUAGCCUUUCUUCCUUGGUGCAUAAAGUUAAAAUGCACAUCAGCAGAAUUGCUGCAUAUUAACAUCUCAGGACUCUUCUCUUGUAAAGAAGCUGAAAUUCGUACUAUAUUGGCCAAAGUGAGCGAGUUAGGUGAUCUUGGUUUCAAUUUCCGAGCCUUUGUUAAUAUGGAGAAUUAUGGUUCAUAUCAGUUAUGUAGGACCUUUGGACCCAGGGUCCUACAGAUAGAUAUGGUGUGCCCAGAUUUUAAAAAUACCUUCAAAAAUAAAAAAUACAUUCAGUGACAUUUUCAUGGUGGGAGCUCUUCUUUCUGAUAUGGCAGUUACACUUUUUCACUUAAGUGCUUUAGUUUAGACUAACUUUACAACUUCUAUAACUUUUGGAACCAAGUUUAGUAUAGUCUGAUUACAUUCCAUUCACCUAACUUUAGACAUUCGUUUAGACACCAUAACUGGAGUGAUUGUGCUUCUAGAUGUGGCAAAUCCAGUGUUAACACAUAUUUCUGGCUGAGAUUUUGGAACUAGCUAGUAACUGGCUUGUGUUCUUUAAGCAUACUAACAUCACUAAAUCUUAGGAUUUAGGAUUGCUGUAAAGAUGUAAGUUGUGUAUGUUUGGCAGGUCACAUUGAAUGGCAGUGAUAAUGAUUAAUCAAAGAACAAAUGUCAUCCUUGAUCUUGCCUAAUGUAGUUUAUGUGCCAAACUUUCCAGGGUUUUGUAGUCACCUAGAUUUUAAGCUGAUAGCAUAGUGCUUCAGCGGUUCUUCUAACCGGGGUAUGCAGGAACAUGGCUGCAGACACGUUUGGGUAAACAGGCACCUUCUGACUUCUUCAUUGUUUCCUGUAGUUCUCCCUCUUCCCACAAAGCUGUCAGCGCAGUGGAAGAGGUUGCACUUCUCCGAGAGAGGACAGGUUUCUGUUAAGAUCACCAAGUAGCUGUGCUUUAAUUAGAGCCAGACAAGCUUUCAAGGUCCUUUAAGUAUUUGAUGAUCAACUGAACACGUUUCUAUUCAAGGAGAAAACACCAUUCAGUAAGAAGAUGGAGUAGAUAUCAGAUAAAACAAUUCACGUUUAAUAUGUAAAUGUACCAAUUAUGUGAUUCAGUUUCAACUUUCAAGUACUUCCUGAGAGGUUAGUACAUUAUUAUUGAGCUCUCACAGAAAGCUUAAUCAUAGAUAUAAUUAACCUGAUCCAAAUGAGUAAAGUGGACCUUAGAAAGGCUAAGUGAUCUUUCUCUGGCUAUCCAGCUAGUAGUAAUGAAGUCAGGUCUUGAACCCCGGUUCUGCUGACUGAAUUGGAUGC
Sequence (MODOMICS CODE ENCODING)	GCAGCCUGAUGGCGCAGGAGGUAGACACGGCACAGGGCGCCGAGAUGCGGCGGGGCGCGGGCGCGGCUCGGGGACGCGCUUCCUGGUGCUGGGCCCUGGCGCUGCUUUGGCUCGCGGUGGUUCCGGGCUGGUCCCGGGUCUCGGGCAUCCCCUCCCGGCGCCACUGGCCGGUGCCCUACAAGCGCUUUGACUUCCGUCCAAAACCUGAUCCUUAUUGUCAAGCUAAGUAUACUUUCUGUCCAACUGGCUCACCUAUCCCAGUUAUGGAGGGUGAUGAUGACAUUGAAGUUUUUCGAUUACAAGCCCCAGUAUGGGAAUUUAAAUAUGGAGACCUCCUGGGACACUUGAAAAUUAUGCAUGAUGCCAUUGGAUUCAGAAGUACAUUAACUGGCAAGAACUACACAAUGGAAUGGUAUGA2000000006ACUUUUCCAACUUGGCAACUGUACAUUUCCCCAUCUCCGACCUGAAAUGGAUGCCCCUUUCUGGUGUAAUCAAGGCGCUGCCUGCUUUUUUGAGGGAAUUGAUGAUGUUCACUGGAAGGAAAAUGGGACAUUAGUUCAAGUAGCAACUAUAUCAGAAAUAUCUUGUGCCUUGAAGAAUGGAAUAAAAUUGGCUGAGCUUGGAUUCCUGUUGUGAAAUGCAGGAAACAUGUUCAACCAAAUGGCAAAGUGGGUGAAACAGGACAAUGAAACAGGAAUUUAUUAUGAGACAUGGAAUGUAAAAGCCAGCCCAGAAAAGGGGGCAGAG2000000006ACAUGGUUUGAUUCCUACGACUGUUCCAAAUUUGUGUUAAGG2000000006ACCU2000000009UUA2000000006ACAAGUUGGCUGAAUUUGGAGCAGAGUUCAAGAACAUAGAAACCAACUAUACAAGAAUAUUUCUUUACAGUGGAGAACCUACUUAUCUGGGAAAUGAAACAUCUGUUUUUGGGCCAACAGGAAACAAG2000000006ACUCUUGGUUUAGCCAUAAAAAGAUUUUAUUACCCCUUCAA2000000006ACCACAUUUGCCAACUAAAGAAUUUCUGUUGAGUCUCUUGCAAAUUUUUGAUGCAGUGAUUGUGCACAA2000000006ACAGUUCUAUUUGUUUUAUAAUUUUGAAUAUUGGUUUUUACCUAUGAAAUUCCCUUUUAUUAAAAUAACAUAUGAAGAAAUCCCU2000000009UUACCUAUCAGAAACAAAACACUCUCUGGUUUAUAAA2000000006ACACCUUAAUUCUACUGCUCUUUUUUCUCCAAUCACCAGCAUCUGUUUUUCAGGGGGUGAUUUUACUUUUGUGAAUUCCUUAGCCUUUCUUCCUUGGUGCAUAAAGUUAAAAUGCACAUCAGCAGAAUUGCUGCAUAUUAACAUCUCAGGACUCUUCUCUUGUAAAGAAGCUGAAAUUCGUACUAUAUUGGCCAAAGUGAGCGAGUUAGGUGAUCUUGGUUUCAAUUUCCGAGCCUUUGUUAAUAUGGAGAAUUAUGGUUCAUAUCAGUUAUGUAGGACCUUUGGACCCAGGGUCCUACAGAUAGAUAUGGUGUGCCCAGAUUUUAAAAAUACCUUCAAAAAUAAAAAAUACAUUCAGUGACAUUUUCAUGGUGGGAGCUCUUCUUUCUGAUAUGGCAGUUACACUUUUUCACUUAAGUGCUUUAGUUUAGACUAACUUUACAACUUCUAUAACUUUUGGAACCAAGUUUAGUAUAGUCUGAUUACAUUCCAUUCACCUAACUUUAGACAUUCGUUUAGACACCAUAACUGGAGUGAUUGUGCUUCUAGAUGUGGCAAAUCCAGUGUUAACACAUAUUUCUGGCUGAGAUUUUGGAACUAGCUAGUAACUGGCUUGUGUUCUUUAAGCAUACUAACAUCACUAAAUCUUAGGAUUUAGGAUUGCUGUAAAGAUGUAAGUUGUGUAUGUUUGGCAGGUCACAUUGAAUGGCAGUGAUAAUGAUUAAUCAAAGAACAAAUGUCAUCCUUGAUCUUGCCUAAUGUAGUUUAUGUGCCAAACUUUCCAGGGUUUUGUAGUCACCUAGAUUUUAAGCUGAUAGCAUAGUGCUUCAGCGGUUCUUCUAACCGGGGUAUGCAGGAACAUGGCUGCAGACACGUUUGGGUAAACAGGCACCUUCUGACUUCUUCAUUGUUUCCUGUAGUUCUCCCUCUUCCCACAAAGCUGUCAGCGCAGUGGAAGAGGUUGCACUUCUCCGAGAGAGGACAGGUUUCUGUUAAGAUCACCAAGUAGCUGUGCUUUAAUUAGAGCCAGACAAGCUUUCAAGGUCCUUUAAGUAUUUGAUGAUCAACUGAACACGUUUCUAUUCAAGGAGAAAACACCAUUCAGUAAGAAGAUGGAGUAGAUAUCAGAUAAAACAAUUCACGUUUAAUAUGUAAAUGUACCAAUUAUGUGAUUCAGUUUCAACUUUCAAGUACUUCCUGAGAGGUUAGUACAUUAUUAUUGAGCUCUCACAGAAAGCUUAAUCAUAGAUAUAAUUAACCUGAUCCAAAUGAGUAAAGUGGACCUUAGAAAGGCUAAGUGAUCUUUCUCUGGCUAUCCAGCUAGUAGUAAUGAAGUCAGGUCUUGAACCCCGGUUCUGCUGACUGAAUUGGAUGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	419	744	786	790	793	921	962	1031	1116	1153
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	13:76995973:+	13:77000562:+	13:77000604:+	13:77000608:+	13:77000611:+	13:77000739:+	13:77000780:+	13:77000849:+	13:77000934:+	13:77000971:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ JkWoGWVwjNda Yfn77uLS5tv8	6AyXsheySjfx msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 Yfn77uLS5tv8	4HMi5ykupT9V 5Nnepx5V7yHo aHkqKEJkRYyb Ap2q43bQLNek msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW gZuvgwMuBfgh msuJfBpJvM5H Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	VL7zkHvkfkoB BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8