General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000700501
Gene ID:	ENSG00000132964
Gene Name:	CDK8
Sequence (UNICHARACTER ENCODING)	GAGGAGGUACCGGCUGUUGUGCGGCUCUGCCCUUCUGUUUGAGUGUAUGGGAGAGUGAGUGAGUGAGUGAGUGUGAGCGUGUGUGUGAGAGCGUGAGGCGUGAGUGCGCGUGUGAGAGGACGAGAGCCCGCCUGGCCGCCCCGCCGCUCCCGCCGCAGCAGGAGCAGAACGCGCGGCCGGAGAGAGCGGCGGAGCCGGCGCCCAGGGAGCCCGCGGGGACAAGGGCAGAGACACCGCUCCCCACCCCCAGCCCUCGUCCCUCGGCUCUCCUUCGCCGGGGGAUCCUCCCCGUUCCUCCACCCCCGGCCGGCCUCUGCCCCGCCGUCCCCCUGGAUGUCCCUGGCGCUUUCGCGGGGCCUCCUCCUGCUCUUGCCGCAUCAGUCGGGCUGGUGCUGCGGCCGGCGGGCGUAGAGCGGGCGGGUUCCCGGGGGCUGCGGCUGCCCGUGCUUCCCCGGUCCCCACCCCUGCCCCCCGGCCCCCCGACCCAGCUCUCCGGCCUCAGAGGCUGUGACAAUGGЖCUAUGACUUUAAAGUGAAGCUGAGCAGCGAGCGGGAGCGGGUCGAGGACCUGUUUGAAUACGAGGGCUGCAAAGUUGGCCGAGGCACUUAUGGUCACGUCUACAAAGCCAAGAGGAAAGAUGGUUACUUCGAGAGCUUAAGCAUCCAAACGUCAUUUCUCUUCAAAAGGUGUUUCUGUCUCAUGCUGAUAGGAAGGUGUGGCUUCUGUUUGACUAUGCUGAACAUGACCUCUGGCAUAUAAUCAAGUUUCACAGAGCUUCUAAAGCAAACAAGAAGCCAGUUCAGUUACCUCGGGGAAUGGUGAAGUCACUAUUAUAUCAGAUCCUAGAUGGUAUUCACUACCUGCAUGCUAACUGGGUGUUGCACAGAGAUUUGAAACCUGCUAAUAUUUUAGUUAUGGGUGAAGGUCCUGAGCGAGGAAGAGUAAAAAUUGCUGACAUGGGCUUUGCCCGAUUAUUUAAUUCACCUUUGAAGCCUUUAGCAGAUUUGGAUCCAGUGGUUGUUACAUUCUGGUACCGAGCCCCUGAACUACUUCUUGGAGCAAGGCAUUAUACCAAAGCUAUUGAUAUUUGGGCUAUAGGGUGUAUAUUUGCAGAACUACUAACGUCAGAACCAAUAUUUCACUGUCGACAAGAGGACAUCAAAACUAGUAAUCCUUAUCACCAUGACCAGCUGGACAGAAUAUUCAAUGUAAUGGGAUUUCCUGCAGAUAAAGAUUGGGAAGAUAUAAAAAAGAUGCCUGAACAUUCAACAUUAAUGAAAGAUUUCAGAAGAAAUACGUAUACCAACUGCAGCCUUAUCAAGUAUAUGGAAAAACAUAAAGUUAAACCAGAUAGUAAAGCAUUCCACUUGCUUCAGAAGCUGCUUACCAUGGACCCAAUAAAGCGAAUUACCUCAGAACAGGCUAUGCAGGACCCCUAUUUCUUAGAAGACCCACUUCCUACAUCAGACGUUUUUGCCGGUUGUCAAAUCCCUUACCCAAAACGAGAAUUUUUAACGGAAGAAGAACCUGAUGACAAAGGAGACAAAAAGAACCAGCAGCAGCAGCAGGGCAAUAACCACACUAAUGGAACUGGCCACCCAGGGAAUCAAGACAGCAGUCACACACAGGGACCCCCGUUGAAGAAAGUGAGAGUUGUUCCUCCUACCACUACCUCAGGUGGACUUAUCAUGACCUCAGACUAUCAGCGUUCCAAUCCACAUGCUGCCUAUCCCAACCCUGGACCAAGCACAUCACAGCCGCAGAGCAGCAUGGGAUACUCAGCUACCUCCCAGCAGCCUCCACAGUACUCACAUCAGACACAUCGGUACUGAGCUGCAUCGGAAUCUUGUCCAUGCACUGUUGCGAAUGCUGCAGGGCUGACUGUGCAGCUCUCUGCGGGAACCUGGUAUGGGCCAUGAGAAUGUЖCUGUACAACCACAUCUUCAAAAUGUCCAGUAGCCAAGUUCCACCACUUUUCACAGAUUGGGGUAGUGGCUUCCAAGUUGUACCUAUUUUGGAGUUAGЖCUUGAAAAGAAAGUGCUAGCACAGUUUGUGUUGUGGAUPUGCUACUUCCAUAGUUUACUUGACAUGGUUCAGACUGACCAAUGCAUUUUUUUCAGUGACAGUCUGUAGCAGUUGAAGCUGUGAAUGUGCUAGGGGCAAGCAUUUGUCUUUGUAUGUGGUGAAUUUUUUCAGUGUAACAACAUUAUCUGACCAAUAGUACACACACAGACACAAAGUUUAACUGGUACUUGAAACAUACAGUAUAUGUUAACGAAAUAACCAAGACUCGAAAUGAGAUUAUUUUGGUACACCUUUCUUUUUAGUGUCUUAUCAGUGGGCUGAUUCAUUUUCUACAUUAAUCAGUGUUUUCUGACCAAGAAUAUUGCUUGGAUUUUUUUGAAAGUACAAAAAGCCACAUAGUUUUUCCAGAAAGGUUUCAAAACUCCCAAAGAUUAЖCUUCCAACUUAUAAGUUUGUUUUUAUUUUCAAUCUAUGACUUGACUGGUAUUAAAGCUGCUAUUUGAUAGUAAUUAAAUAUGUUGUCAUUGAUAUAAACCUGUUUGGUUCAGCAAACAAACUAAAAUGAUUGUCAUAGACAGUGUUUUAUUUUUCCUGUUGGUGUUGCUGAUUUGUGAGCAUGCUPUAAGAUGAAAAAAGCAUGAAUGAUAЖCUUCCUUAAAAAGGUGCGGCAPCCAAUUCAAAUAUUUUCGUCCUGAUUUUAAAGCUGGUUGGUGUAGUGCUAUUAAAAUUUCGUUCAGUUAAUUUUCCUUUUGAAAACUUGUUCGCACGUUGUUUAGGGUGCCCUUACUUCAGCAAAGGAGAAGGAGUAGGAGAGCCUUAGAAUUUUUGAGGAAAAAAAAACCUAUAACAUACAAUGUACUGUAUCAAACUAUUUUACAUGAAUGACACAAGUAUUCUGAAUAAAAAAUAAUUGAACAUUGUUAAAAACAAGGUGUUAUGUAAUAAAUUUAUUUUUCAUAAAUCAAAA
Sequence (SHORT NAMES ENCODING)	GAGGAGGUACCGGCUGUUGUGCGGCUCUGCCCUUCUGUUUGAGUGUAUGGGAGAGUGAGUGAGUGAGUGAGUGUGAGCGUGUGUGUGAGAGCGUGAGGCGUGAGUGCGCGUGUGAGAGGACGAGAGCCCGCCUGGCCGCCCCGCCGCUCCCGCCGCAGCAGGAGCAGAACGCGCGGCCGGAGAGAGCGGCGGAGCCGGCGCCCAGGGAGCCCGCGGGGACAAGGGCAGAGACACCGCUCCCCACCCCCAGCCCUCGUCCCUCGGCUCUCCUUCGCCGGGGGAUCCUCCCCGUUCCUCCACCCCCGGCCGGCCUCUGCCCCGCCGUCCCCCUGGAUGUCCCUGGCGCUUUCGCGGGGCCUCCUCCUGCUCUUGCCGCAUCAGUCGGGCUGGUGCUGCGGCCGGCGGGCGUAGAGCGGGCGGGUUCCCGGGGGCUGCGGCUGCCCGUGCUUCCCCGGUCCCCACCCCUGCCCCCCGGCCCCCCGACCCAGCUCUCCGGCCUCAGAGGCUGUGACAAUGGm6ACUAUGACUUUAAAGUGAAGCUGAGCAGCGAGCGGGAGCGGGUCGAGGACCUGUUUGAAUACGAGGGCUGCAAAGUUGGCCGAGGCACUUAUGGUCACGUCUACAAAGCCAAGAGGAAAGAUGGUUACUUCGAGAGCUUAAGCAUCCAAACGUCAUUUCUCUUCAAAAGGUGUUUCUGUCUCAUGCUGAUAGGAAGGUGUGGCUUCUGUUUGACUAUGCUGAACAUGACCUCUGGCAUAUAAUCAAGUUUCACAGAGCUUCUAAAGCAAACAAGAAGCCAGUUCAGUUACCUCGGGGAAUGGUGAAGUCACUAUUAUAUCAGAUCCUAGAUGGUAUUCACUACCUGCAUGCUAACUGGGUGUUGCACAGAGAUUUGAAACCUGCUAAUAUUUUAGUUAUGGGUGAAGGUCCUGAGCGAGGAAGAGUAAAAAUUGCUGACAUGGGCUUUGCCCGAUUAUUUAAUUCACCUUUGAAGCCUUUAGCAGAUUUGGAUCCAGUGGUUGUUACAUUCUGGUACCGAGCCCCUGAACUACUUCUUGGAGCAAGGCAUUAUACCAAAGCUAUUGAUAUUUGGGCUAUAGGGUGUAUAUUUGCAGAACUACUAACGUCAGAACCAAUAUUUCACUGUCGACAAGAGGACAUCAAAACUAGUAAUCCUUAUCACCAUGACCAGCUGGACAGAAUAUUCAAUGUAAUGGGAUUUCCUGCAGAUAAAGAUUGGGAAGAUAUAAAAAAGAUGCCUGAACAUUCAACAUUAAUGAAAGAUUUCAGAAGAAAUACGUAUACCAACUGCAGCCUUAUCAAGUAUAUGGAAAAACAUAAAGUUAAACCAGAUAGUAAAGCAUUCCACUUGCUUCAGAAGCUGCUUACCAUGGACCCAAUAAAGCGAAUUACCUCAGAACAGGCUAUGCAGGACCCCUAUUUCUUAGAAGACCCACUUCCUACAUCAGACGUUUUUGCCGGUUGUCAAAUCCCUUACCCAAAACGAGAAUUUUUAACGGAAGAAGAACCUGAUGACAAAGGAGACAAAAAGAACCAGCAGCAGCAGCAGGGCAAUAACCACACUAAUGGAACUGGCCACCCAGGGAAUCAAGACAGCAGUCACACACAGGGACCCCCGUUGAAGAAAGUGAGAGUUGUUCCUCCUACCACUACCUCAGGUGGACUUAUCAUGACCUCAGACUAUCAGCGUUCCAAUCCACAUGCUGCCUAUCCCAACCCUGGACCAAGCACAUCACAGCCGCAGAGCAGCAUGGGAUACUCAGCUACCUCCCAGCAGCCUCCACAGUACUCACAUCAGACACAUCGGUACUGAGCUGCAUCGGAAUCUUGUCCAUGCACUGUUGCGAAUGCUGCAGGGCUGACUGUGCAGCUCUCUGCGGGAACCUGGUAUGGGCCAUGAGAAUGUm6ACUGUACAACCACAUCUUCAAAAUGUCCAGUAGCCAAGUUCCACCACUUUUCACAGAUUGGGGUAGUGGCUUCCAAGUUGUACCUAUUUUGGAGUUAGm6ACUUGAAAAGAAAGUGCUAGCACAGUUUGUGUUGUGGAUYUGCUACUUCCAUAGUUUACUUGACAUGGUUCAGACUGACCAAUGCAUUUUUUUCAGUGACAGUCUGUAGCAGUUGAAGCUGUGAAUGUGCUAGGGGCAAGCAUUUGUCUUUGUAUGUGGUGAAUUUUUUCAGUGUAACAACAUUAUCUGACCAAUAGUACACACACAGACACAAAGUUUAACUGGUACUUGAAACAUACAGUAUAUGUUAACGAAAUAACCAAGACUCGAAAUGAGAUUAUUUUGGUACACCUUUCUUUUUAGUGUCUUAUCAGUGGGCUGAUUCAUUUUCUACAUUAAUCAGUGUUUUCUGACCAAGAAUAUUGCUUGGAUUUUUUUGAAAGUACAAAAAGCCACAUAGUUUUUCCAGAAAGGUUUCAAAACUCCCAAAGAUUAm6ACUUCCAACUUAUAAGUUUGUUUUUAUUUUCAAUCUAUGACUUGACUGGUAUUAAAGCUGCUAUUUGAUAGUAAUUAAAUAUGUUGUCAUUGAUAUAAACCUGUUUGGUUCAGCAAACAAACUAAAAUGAUUGUCAUAGACAGUGUUUUAUUUUUCCUGUUGGUGUUGCUGAUUUGUGAGCAUGCUYUAAGAUGAAAAAAGCAUGAAUGAUAm6ACUUCCUUAAAAAGGUGCGGCAYCCAAUUCAAAUAUUUUCGUCCUGAUUUUAAAGCUGGUUGGUGUAGUGCUAUUAAAAUUUCGUUCAGUUAAUUUUCCUUUUGAAAACUUGUUCGCACGUUGUUUAGGGUGCCCUUACUUCAGCAAAGGAGAAGGAGUAGGAGAGCCUUAGAAUUUUUGAGGAAAAAAAAACCUAUAACAUACAAUGUACUGUAUCAAACUAUUUUACAUGAAUGACACAAGUAUUCUGAAUAAAAAAUAAUUGAACAUUGUUAAAAACAAGGUGUUAUGUAAUAAAUUUAUUUUUCAUAAAUCAAAA
Sequence (MODOMICS CODE ENCODING)	GAGGAGGUACCGGCUGUUGUGCGGCUCUGCCCUUCUGUUUGAGUGUAUGGGAGAGUGAGUGAGUGAGUGAGUGUGAGCGUGUGUGUGAGAGCGUGAGGCGUGAGUGCGCGUGUGAGAGGACGAGAGCCCGCCUGGCCGCCCCGCCGCUCCCGCCGCAGCAGGAGCAGAACGCGCGGCCGGAGAGAGCGGCGGAGCCGGCGCCCAGGGAGCCCGCGGGGACAAGGGCAGAGACACCGCUCCCCACCCCCAGCCCUCGUCCCUCGGCUCUCCUUCGCCGGGGGAUCCUCCCCGUUCCUCCACCCCCGGCCGGCCUCUGCCCCGCCGUCCCCCUGGAUGUCCCUGGCGCUUUCGCGGGGCCUCCUCCUGCUCUUGCCGCAUCAGUCGGGCUGGUGCUGCGGCCGGCGGGCGUAGAGCGGGCGGGUUCCCGGGGGCUGCGGCUGCCCGUGCUUCCCCGGUCCCCACCCCUGCCCCCCGGCCCCCCGACCCAGCUCUCCGGCCUCAGAGGCUGUGACAAUGG2000000006ACUAUGACUUUAAAGUGAAGCUGAGCAGCGAGCGGGAGCGGGUCGAGGACCUGUUUGAAUACGAGGGCUGCAAAGUUGGCCGAGGCACUUAUGGUCACGUCUACAAAGCCAAGAGGAAAGAUGGUUACUUCGAGAGCUUAAGCAUCCAAACGUCAUUUCUCUUCAAAAGGUGUUUCUGUCUCAUGCUGAUAGGAAGGUGUGGCUUCUGUUUGACUAUGCUGAACAUGACCUCUGGCAUAUAAUCAAGUUUCACAGAGCUUCUAAAGCAAACAAGAAGCCAGUUCAGUUACCUCGGGGAAUGGUGAAGUCACUAUUAUAUCAGAUCCUAGAUGGUAUUCACUACCUGCAUGCUAACUGGGUGUUGCACAGAGAUUUGAAACCUGCUAAUAUUUUAGUUAUGGGUGAAGGUCCUGAGCGAGGAAGAGUAAAAAUUGCUGACAUGGGCUUUGCCCGAUUAUUUAAUUCACCUUUGAAGCCUUUAGCAGAUUUGGAUCCAGUGGUUGUUACAUUCUGGUACCGAGCCCCUGAACUACUUCUUGGAGCAAGGCAUUAUACCAAAGCUAUUGAUAUUUGGGCUAUAGGGUGUAUAUUUGCAGAACUACUAACGUCAGAACCAAUAUUUCACUGUCGACAAGAGGACAUCAAAACUAGUAAUCCUUAUCACCAUGACCAGCUGGACAGAAUAUUCAAUGUAAUGGGAUUUCCUGCAGAUAAAGAUUGGGAAGAUAUAAAAAAGAUGCCUGAACAUUCAACAUUAAUGAAAGAUUUCAGAAGAAAUACGUAUACCAACUGCAGCCUUAUCAAGUAUAUGGAAAAACAUAAAGUUAAACCAGAUAGUAAAGCAUUCCACUUGCUUCAGAAGCUGCUUACCAUGGACCCAAUAAAGCGAAUUACCUCAGAACAGGCUAUGCAGGACCCCUAUUUCUUAGAAGACCCACUUCCUACAUCAGACGUUUUUGCCGGUUGUCAAAUCCCUUACCCAAAACGAGAAUUUUUAACGGAAGAAGAACCUGAUGACAAAGGAGACAAAAAGAACCAGCAGCAGCAGCAGGGCAAUAACCACACUAAUGGAACUGGCCACCCAGGGAAUCAAGACAGCAGUCACACACAGGGACCCCCGUUGAAGAAAGUGAGAGUUGUUCCUCCUACCACUACCUCAGGUGGACUUAUCAUGACCUCAGACUAUCAGCGUUCCAAUCCACAUGCUGCCUAUCCCAACCCUGGACCAAGCACAUCACAGCCGCAGAGCAGCAUGGGAUACUCAGCUACCUCCCAGCAGCCUCCACAGUACUCACAUCAGACACAUCGGUACUGAGCUGCAUCGGAAUCUUGUCCAUGCACUGUUGCGAAUGCUGCAGGGCUGACUGUGCAGCUCUCUGCGGGAACCUGGUAUGGGCCAUGAGAAUGU2000000006ACUGUACAACCACAUCUUCAAAAUGUCCAGUAGCCAAGUUCCACCACUUUUCACAGAUUGGGGUAGUGGCUUCCAAGUUGUACCUAUUUUGGAGUUAG2000000006ACUUGAAAAGAAAGUGCUAGCACAGUUUGUGUUGUGGAU2000000009UUGCUACUUCCAUAGUUUACUUGACAUGGUUCAGACUGACCAAUGCAUUUUUUUCAGUGACAGUCUGUAGCAGUUGAAGCUGUGAAUGUGCUAGGGGCAAGCAUUUGUCUUUGUAUGUGGUGAAUUUUUUCAGUGUAACAACAUUAUCUGACCAAUAGUACACACACAGACACAAAGUUUAACUGGUACUUGAAACAUACAGUAUAUGUUAACGAAAUAACCAAGACUCGAAAUGAGAUUAUUUUGGUACACCUUUCUUUUUAGUGUCUUAUCAGUGGGCUGAUUCAUUUUCUACAUUAAUCAGUGUUUUCUGACCAAGAAUAUUGCUUGGAUUUUUUUGAAAGUACAAAAAGCCACAUAGUUUUUCCAGAAAGGUUUCAAAACUCCCAAAGAUUA2000000006ACUUCCAACUUAUAAGUUUGUUUUUAUUUUCAAUCUAUGACUUGACUGGUAUUAAAGCUGCUAUUUGAUAGUAAUUAAAUAUGUUGUCAUUGAUAUAAACCUGUUUGGUUCAGCAAACAAACUAAAAUGAUUGUCAUAGACAGUGUUUUAUUUUUCCUGUUGGUGUUGCUGAUUUGUGAGCAUGCU2000000009UUAAGAUGAAAAAAGCAUGAAUGAUA2000000006ACUUCCUUAAAAAGGUGCGGCA2000000009UCCAAUUCAAAUAUUUUCGUCCUGAUUUUAAAGCUGGUUGGUGUAGUGCUAUUAAAAUUUCGUUCAGUUAAUUUUCCUUUUGAAAACUUGUUCGCACGUUGUUUAGGGUGCCCUUACUUCAGCAAAGGAGAAGGAGUAGGAGAGCCUUAGAAUUUUUGAGGAAAAAAAAACCUAUAACAUACAAUGUACUGUAUCAAACUAUUUUACAUGAAUGACACAAGUAUUCUGAAUAAAAAAUAAUUGAACAUUGUUAAAAACAAGGUGUUAUGUAAUAAAUUUAUUUUUCAUAAAUCAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	518	1926	2024	2063	2459	2645	2671	2693
Modification Positions	m6A	m6A	m6A	Y	m6A	Y	m6A	Y
Genomic Coordinates	13:26254646:+	13:26404175:+	13:26404273:+	13:26404312:+	13:26404708:+	13:26404894:+	13:26404920:+	13:26404942:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8