Modomics - A Database of RNA Modifications

General Data

RNA Type unknown
Original Source Sci-ModoM
Transcript ID: ENST00000375781
Gene ID: ENSG00000134905
Gene Name: CARS2
Sequence (UNICHARACTER ENCODING) CUGAGUCAGCUGGGGCACCCCUGCCAUCUGCUCUCAGUGUGGGGCUGGGUGUCCCUGCACCGUGGAACAAGGGCAGGUCCUGUCUUCCCGGAAGGCCCAGCACGGGUGAAGAUUUGGGGGCAGAUUUAUACCAACAUACACUGGUCUAUACAUUGGAUAUGUGCAGGUUCCCAUUCGUUUCCUGGGGAGCCAUGUGUCCCUGAGGCCAGAGAGUCUCCUCACCCAGCUCAGACUGAAUGCUUUUGUUUUUGUUUCAGGGCAUUUGCACGCCAAAGGCAAAGAAGAAAAAAUGUCCAAAUCAUUAAAGAACUACЖUUACUAUUAAGCCAUCGACUACAGUGACAGCGCCAUGCUCCAAGCUCAGCAGCUGCUCCUGGGGCUGGGCUCUUUCCUGGAGGACGCACGUGCCUACAUGAAGGGGCAGCUGGCCUGCGGCUCCGUCAGGGAAGCGAUGCUGUGGGAGAGGCUCUCCAGCACCAAGAGGGCCGUGAAGGCGGCCUUGGCAGAUGAUUUUGACACACCCAGGGUGGUUGAUGCCAPCCUGGGCCUUGCACACCACGGGAAUGGACAGCUCAGGGCGUCCCUGAAGGAACCUGAAGGGCCGAGAAGUCCUGCUGUGUUUGGUGCCAUCAUCUCUUACUUUGAЖCAGUUUUUUGAAACUGUUGGAAUUUCUCUGGCAAAUCAACAGUUGGCAAACUCUCGUGCGCAGAACCAGAGAUGAGUCCAUCUCAGCAACAGAAUGUCGCCAGCUCUGCACACACGUUUAUGUUCAAAGЖCUCUCAGAAUGUGCAGAAGUCACAGGCACAGUAAGAGAЖCAUUUUUUCCUGACCCAUUUGAGGGCAAGUUGGCGACCUGAGCCCCCUUGCCUGGCACAUGUUUUGUACGGЖCAGGACGGGCUCCCCGACAGGCACGAGUCACCUGCACCUUCCCAGCGAGGCUCACCCUGGCUGUGCAGUGAAGGUGGACGCUGCCAGGCUUCUCCACAUUCCUUCUCUUCCGUUGUAACUCAAGAGCAUUUUUGCAAAGAGЖCUUGGAUCCUAUGAAAAUGUCCUCUUCCUUAUCAGGCUCACCUGAAACUCGUUUAUUCUAUCAAUACAGAUUUGAGGUUUCCUGCCUUAUUCUUAAAGUCCCCACCAUCACUUUGUAUGUGGCUGACAGAGGCCCCUUGGGGCUGGCGCUGUGUCCCUGAACAUCCCUGUCAUUCUUUGGЖCACCCUUGUAGAAUUCUCAGCACAAGGCGCUCUGGCUCUUUUGGGGUGUGGCUCGGCUGCUGCUGCCUGGACGGGGGCUGCCACUCUAGACCAGCUGCCCAGCACCCCGAGGGUCCCGCCGCUUGGGACUGGGGCCCAAGCAGGUGUGCUGAAGGCCUGGCUCUGGGCCAAACAUGUCUCGCUGGCUCUCAACAGAGAЖCUAUAGUGUCUUUUCCAAGUUUGGCUCAUUUGUAUACCUGUUGAUCACCUGGUAGACUUAGUUCCCCUUUCCAGCAGUCCGGCGUCUGUUGCCAAUCACAUAAAAGUCGACUGGUGUGAGAUGACCCAAGUUUUUGCAAUGUACAUGUUCAUUUUUAGGGGUGGCUUUCCGGAGUCUGUUUUGAGUAAGAAAAGUGGGAUCUGGCCAAGCUCUGCCUAGCCCUUGUCAAAGAUAUCUCAUUCACCUUCCUCUGGCCGCAAGGCCCAAUGUCUGGGCCCACUCUGGGCUCAUAUUUCUGUAAUAACAAAAACUGUCUUUUAUCAUGGAAGCAAUAACUGAGGGGUGUGUGAGGUUUAAGUAGUUUGACACCAAGGUCAAAUGUUGUGUCUGUUUCUUAUUUUACACACAUGGAUUUAACAAAUAGGUACAGCUGCCCCUUCCACACCGCCCCAGGAUCUGUUCUCAGUGGGAGGACAGCGCGAGGCCUUCUGCGCAAAUCCCGUCCUCAGCACCUGAGGCUGUGAAUCUCAGACCAUUUGCCGAAACACACGUGUGCAAGCGCUCAGUCGCUGCCCCCCAGCCUCAUCCUCAGGUUGCUCCUGAUACCUCGGCCACAAUUGCGUGAGGUCUGGAAGCCAGGGAGCGUUUGUGUUCAGGGCGGGGCGGCAUGCAGCCCCCAGCCCUUUCUUCCAACUCCCGAGUGAGGAUCACUCAGCCUUGCUUGGACGACAGAUGCUCAGAGUUGAGUGGAGCCUUGCCCAGAGCCCAGCGCUCGCGGGCUGUACCCAUCCCUGCCAGACCCAGAAAGAGGCCCAGCUGCAGGGAAUCAGGGAAGCCCAGGGCUGGGUGGGUGUCGGCCCAGAGCCCAACCACGGGGUGGGGAGGGGGCAUCCACAAUCCACAGUCUCCGGGGGACGUAACCGCGCCCUGCUGGCUUCAGUACGUUUCAGGAGACGGCAGCGAGGCUACCUUGCAUGGUGUGGUGGACGAGCUGGUGCGGUUCCGGCAGAAGGUCCGGCAGUUUGCGCUGGCCAUGCCCGAGGCCACGGGGGACGCCCGGCGGCAGCAGCUCCUAGAAAGGCAGCCCCUGCUGGAAGCAUGCGACACCCUGCGCCGGGGCCUGACUGCCCACGGCAUCAACAUCAAGGACAGAAGCAGUACAACAPCCACGUGGGAACUGCUGGAUCAAAGGACAAAAGACCAAAAAUCAGCGGGCUGAGGAUGGAGCACAGCCAUGAACCUGCUCACGACAAGACGCACCCAUGCUUCUCAGGGUCAAGGCUPUAUGUUAAAGCUUCCUGUCGGGGCUGCUAGGUCAGCAUUAAAGUAAGGCAACCAA
Sequence (SHORT NAMES ENCODING) CUGAGUCAGCUGGGGCACCCCUGCCAUCUGCUCUCAGUGUGGGGCUGGGUGUCCCUGCACCGUGGAACAAGGGCAGGUCCUGUCUUCCCGGAAGGCCCAGCACGGGUGAAGAUUUGGGGGCAGAUUUAUACCAACAUACACUGGUCUAUACAUUGGAUAUGUGCAGGUUCCCAUUCGUUUCCUGGGGAGCCAUGUGUCCCUGAGGCCAGAGAGUCUCCUCACCCAGCUCAGACUGAAUGCUUUUGUUUUUGUUUCAGGGCAUUUGCACGCCAAAGGCAAAGAAGAAAAAAUGUCCAAAUCAUUAAAGAACUACm6AUUACUAUUAAGCCAUCGACUACAGUGACAGCGCCAUGCUCCAAGCUCAGCAGCUGCUCCUGGGGCUGGGCUCUUUCCUGGAGGACGCACGUGCCUACAUGAAGGGGCAGCUGGCCUGCGGCUCCGUCAGGGAAGCGAUGCUGUGGGAGAGGCUCUCCAGCACCAAGAGGGCCGUGAAGGCGGCCUUGGCAGAUGAUUUUGACACACCCAGGGUGGUUGAUGCCAYCCUGGGCCUUGCACACCACGGGAAUGGACAGCUCAGGGCGUCCCUGAAGGAACCUGAAGGGCCGAGAAGUCCUGCUGUGUUUGGUGCCAUCAUCUCUUACUUUGAm6ACAGUUUUUUGAAACUGUUGGAAUUUCUCUGGCAAAUCAACAGUUGGCAAACUCUCGUGCGCAGAACCAGAGAUGAGUCCAUCUCAGCAACAGAAUGUCGCCAGCUCUGCACACACGUUUAUGUUCAAAGm6ACUCUCAGAAUGUGCAGAAGUCACAGGCACAGUAAGAGAm6ACAUUUUUUCCUGACCCAUUUGAGGGCAAGUUGGCGACCUGAGCCCCCUUGCCUGGCACAUGUUUUGUACGGm6ACAGGACGGGCUCCCCGACAGGCACGAGUCACCUGCACCUUCCCAGCGAGGCUCACCCUGGCUGUGCAGUGAAGGUGGACGCUGCCAGGCUUCUCCACAUUCCUUCUCUUCCGUUGUAACUCAAGAGCAUUUUUGCAAAGAGm6ACUUGGAUCCUAUGAAAAUGUCCUCUUCCUUAUCAGGCUCACCUGAAACUCGUUUAUUCUAUCAAUACAGAUUUGAGGUUUCCUGCCUUAUUCUUAAAGUCCCCACCAUCACUUUGUAUGUGGCUGACAGAGGCCCCUUGGGGCUGGCGCUGUGUCCCUGAACAUCCCUGUCAUUCUUUGGm6ACACCCUUGUAGAAUUCUCAGCACAAGGCGCUCUGGCUCUUUUGGGGUGUGGCUCGGCUGCUGCUGCCUGGACGGGGGCUGCCACUCUAGACCAGCUGCCCAGCACCCCGAGGGUCCCGCCGCUUGGGACUGGGGCCCAAGCAGGUGUGCUGAAGGCCUGGCUCUGGGCCAAACAUGUCUCGCUGGCUCUCAACAGAGAm6ACUAUAGUGUCUUUUCCAAGUUUGGCUCAUUUGUAUACCUGUUGAUCACCUGGUAGACUUAGUUCCCCUUUCCAGCAGUCCGGCGUCUGUUGCCAAUCACAUAAAAGUCGACUGGUGUGAGAUGACCCAAGUUUUUGCAAUGUACAUGUUCAUUUUUAGGGGUGGCUUUCCGGAGUCUGUUUUGAGUAAGAAAAGUGGGAUCUGGCCAAGCUCUGCCUAGCCCUUGUCAAAGAUAUCUCAUUCACCUUCCUCUGGCCGCAAGGCCCAAUGUCUGGGCCCACUCUGGGCUCAUAUUUCUGUAAUAACAAAAACUGUCUUUUAUCAUGGAAGCAAUAACUGAGGGGUGUGUGAGGUUUAAGUAGUUUGACACCAAGGUCAAAUGUUGUGUCUGUUUCUUAUUUUACACACAUGGAUUUAACAAAUAGGUACAGCUGCCCCUUCCACACCGCCCCAGGAUCUGUUCUCAGUGGGAGGACAGCGCGAGGCCUUCUGCGCAAAUCCCGUCCUCAGCACCUGAGGCUGUGAAUCUCAGACCAUUUGCCGAAACACACGUGUGCAAGCGCUCAGUCGCUGCCCCCCAGCCUCAUCCUCAGGUUGCUCCUGAUACCUCGGCCACAAUUGCGUGAGGUCUGGAAGCCAGGGAGCGUUUGUGUUCAGGGCGGGGCGGCAUGCAGCCCCCAGCCCUUUCUUCCAACUCCCGAGUGAGGAUCACUCAGCCUUGCUUGGACGACAGAUGCUCAGAGUUGAGUGGAGCCUUGCCCAGAGCCCAGCGCUCGCGGGCUGUACCCAUCCCUGCCAGACCCAGAAAGAGGCCCAGCUGCAGGGAAUCAGGGAAGCCCAGGGCUGGGUGGGUGUCGGCCCAGAGCCCAACCACGGGGUGGGGAGGGGGCAUCCACAAUCCACAGUCUCCGGGGGACGUAACCGCGCCCUGCUGGCUUCAGUACGUUUCAGGAGACGGCAGCGAGGCUACCUUGCAUGGUGUGGUGGACGAGCUGGUGCGGUUCCGGCAGAAGGUCCGGCAGUUUGCGCUGGCCAUGCCCGAGGCCACGGGGGACGCCCGGCGGCAGCAGCUCCUAGAAAGGCAGCCCCUGCUGGAAGCAUGCGACACCCUGCGCCGGGGCCUGACUGCCCACGGCAUCAACAUCAAGGACAGAAGCAGUACAACAYCCACGUGGGAACUGCUGGAUCAAAGGACAAAAGACCAAAAAUCAGCGGGCUGAGGAUGGAGCACAGCCAUGAACCUGCUCACGACAAGACGCACCCAUGCUUCUCAGGGUCAAGGCUYUAUGUUAAAGCUUCCUGUCGGGGCUGCUAGGUCAGCAUUAAAGUAAGGCAACCAA
Sequence (MODOMICS CODE ENCODING) CUGAGUCAGCUGGGGCACCCCUGCCAUCUGCUCUCAGUGUGGGGCUGGGUGUCCCUGCACCGUGGAACAAGGGCAGGUCCUGUCUUCCCGGAAGGCCCAGCACGGGUGAAGAUUUGGGGGCAGAUUUAUACCAACAUACACUGGUCUAUACAUUGGAUAUGUGCAGGUUCCCAUUCGUUUCCUGGGGAGCCAUGUGUCCCUGAGGCCAGAGAGUCUCCUCACCCAGCUCAGACUGAAUGCUUUUGUUUUUGUUUCAGGGCAUUUGCACGCCAAAGGCAAAGAAGAAAAAAUGUCCAAAUCAUUAAAGAACUAC2000000006AUUACUAUUAAGCCAUCGACUACAGUGACAGCGCCAUGCUCCAAGCUCAGCAGCUGCUCCUGGGGCUGGGCUCUUUCCUGGAGGACGCACGUGCCUACAUGAAGGGGCAGCUGGCCUGCGGCUCCGUCAGGGAAGCGAUGCUGUGGGAGAGGCUCUCCAGCACCAAGAGGGCCGUGAAGGCGGCCUUGGCAGAUGAUUUUGACACACCCAGGGUGGUUGAUGCCA2000000009UCCUGGGCCUUGCACACCACGGGAAUGGACAGCUCAGGGCGUCCCUGAAGGAACCUGAAGGGCCGAGAAGUCCUGCUGUGUUUGGUGCCAUCAUCUCUUACUUUGA2000000006ACAGUUUUUUGAAACUGUUGGAAUUUCUCUGGCAAAUCAACAGUUGGCAAACUCUCGUGCGCAGAACCAGAGAUGAGUCCAUCUCAGCAACAGAAUGUCGCCAGCUCUGCACACACGUUUAUGUUCAAAG2000000006ACUCUCAGAAUGUGCAGAAGUCACAGGCACAGUAAGAGA2000000006ACAUUUUUUCCUGACCCAUUUGAGGGCAAGUUGGCGACCUGAGCCCCCUUGCCUGGCACAUGUUUUGUACGG2000000006ACAGGACGGGCUCCCCGACAGGCACGAGUCACCUGCACCUUCCCAGCGAGGCUCACCCUGGCUGUGCAGUGAAGGUGGACGCUGCCAGGCUUCUCCACAUUCCUUCUCUUCCGUUGUAACUCAAGAGCAUUUUUGCAAAGAG2000000006ACUUGGAUCCUAUGAAAAUGUCCUCUUCCUUAUCAGGCUCACCUGAAACUCGUUUAUUCUAUCAAUACAGAUUUGAGGUUUCCUGCCUUAUUCUUAAAGUCCCCACCAUCACUUUGUAUGUGGCUGACAGAGGCCCCUUGGGGCUGGCGCUGUGUCCCUGAACAUCCCUGUCAUUCUUUGG2000000006ACACCCUUGUAGAAUUCUCAGCACAAGGCGCUCUGGCUCUUUUGGGGUGUGGCUCGGCUGCUGCUGCCUGGACGGGGGCUGCCACUCUAGACCAGCUGCCCAGCACCCCGAGGGUCCCGCCGCUUGGGACUGGGGCCCAAGCAGGUGUGCUGAAGGCCUGGCUCUGGGCCAAACAUGUCUCGCUGGCUCUCAACAGAGA2000000006ACUAUAGUGUCUUUUCCAAGUUUGGCUCAUUUGUAUACCUGUUGAUCACCUGGUAGACUUAGUUCCCCUUUCCAGCAGUCCGGCGUCUGUUGCCAAUCACAUAAAAGUCGACUGGUGUGAGAUGACCCAAGUUUUUGCAAUGUACAUGUUCAUUUUUAGGGGUGGCUUUCCGGAGUCUGUUUUGAGUAAGAAAAGUGGGAUCUGGCCAAGCUCUGCCUAGCCCUUGUCAAAGAUAUCUCAUUCACCUUCCUCUGGCCGCAAGGCCCAAUGUCUGGGCCCACUCUGGGCUCAUAUUUCUGUAAUAACAAAAACUGUCUUUUAUCAUGGAAGCAAUAACUGAGGGGUGUGUGAGGUUUAAGUAGUUUGACACCAAGGUCAAAUGUUGUGUCUGUUUCUUAUUUUACACACAUGGAUUUAACAAAUAGGUACAGCUGCCCCUUCCACACCGCCCCAGGAUCUGUUCUCAGUGGGAGGACAGCGCGAGGCCUUCUGCGCAAAUCCCGUCCUCAGCACCUGAGGCUGUGAAUCUCAGACCAUUUGCCGAAACACACGUGUGCAAGCGCUCAGUCGCUGCCCCCCAGCCUCAUCCUCAGGUUGCUCCUGAUACCUCGGCCACAAUUGCGUGAGGUCUGGAAGCCAGGGAGCGUUUGUGUUCAGGGCGGGGCGGCAUGCAGCCCCCAGCCCUUUCUUCCAACUCCCGAGUGAGGAUCACUCAGCCUUGCUUGGACGACAGAUGCUCAGAGUUGAGUGGAGCCUUGCCCAGAGCCCAGCGCUCGCGGGCUGUACCCAUCCCUGCCAGACCCAGAAAGAGGCCCAGCUGCAGGGAAUCAGGGAAGCCCAGGGCUGGGUGGGUGUCGGCCCAGAGCCCAACCACGGGGUGGGGAGGGGGCAUCCACAAUCCACAGUCUCCGGGGGACGUAACCGCGCCCUGCUGGCUUCAGUACGUUUCAGGAGACGGCAGCGAGGCUACCUUGCAUGGUGUGGUGGACGAGCUGGUGCGGUUCCGGCAGAAGGUCCGGCAGUUUGCGCUGGCCAUGCCCGAGGCCACGGGGGACGCCCGGCGGCAGCAGCUCCUAGAAAGGCAGCCCCUGCUGGAAGCAUGCGACACCCUGCGCCGGGGCCUGACUGCCCACGGCAUCAACAUCAAGGACAGAAGCAGUACAACA2000000009UCCACGUGGGAACUGCUGGAUCAAAGGACAAAAGACCAAAAAUCAGCGGGCUGAGGAUGGAGCACAGCCAUGAACCUGCUCACGACAAGACGCACCCAUGCUUCUCAGGGUCAAGGCU2000000009UUAUGUUAAAGCUUCCUGUCGGGGCUGCUAGGUCAGCAUUAAAGUAAGGCAACCAA

Score Table

Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.
Method Classification Score
Multiple direct experimental evidence 1
Direct experimental evidence 2
Inferred based on indirect experimental evidence 3
Predicted computationally 4
Evidence not yet annotated (Unknown) 5
Irrelevant 6

Modification Positions

Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.

Position in the Sequence 314 539 645 775 814 886 1028 1209 1408 2574 2692
Modification Positions m6A Y m6A m6A m6A m6A m6A m6A m6A Y Y
Genomic Coordinates 13:110663462:- 13:110646016:- 13:110644427:- 13:110644095:- 13:110644056:- 13:110643984:- 13:110643842:- 13:110643661:- 13:110643462:- 13:110641590:- 13:110641472:-
Level of Experimental Evidence 3 3 3 3 3 3 3 3 3 3 3
Level of Experimental Reliability 3 3 3 3 3 3 3 3 3 3 3
Source Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM
EUFIDs 3kRDPWwiRCgi
L6w2k2VEv4EY
BtsJQJ3DteUq
bXBqJigD9oV3
CxQaH6qDB9bC
dknfVe6BK8aP
f6YSioLdAWpr
Mk6ShCGm6RBJ
oZ9Kp5NX8Hv5
XWZVGdLC6gGJ
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
CxQaH6qDB9bC
dknfVe6BK8aP
f6YSioLdAWpr
Mk6ShCGm6RBJ
oZ9Kp5NX8Hv5
XWZVGdLC6gGJ
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
jNkxUQNx8GRd
VL7zkHvkfkoB
VyCX26p5UBRL
WdHxkJGRmFxn
Lny8GcCeVGc9
6UuHp6YApVKv
jNkxUQNx8GRd
VL7zkHvkfkoB
6UuHp6YApVKv
gZuvgwMuBfgh
jNkxUQNx8GRd
msuJfBpJvM5H
VL7zkHvkfkoB
WdHxkJGRmFxn
6UuHp6YApVKv
jNkxUQNx8GRd
VL7zkHvkfkoB
WdHxkJGRmFxn
6UuHp6YApVKv
jNkxUQNx8GRd
VL7zkHvkfkoB
WdHxkJGRmFxn
6UuHp6YApVKv
jNkxUQNx8GRd
BtsJQJ3DteUq
bXBqJigD9oV3
CxQaH6qDB9bC
dknfVe6BK8aP
f6YSioLdAWpr
Mk6ShCGm6RBJ
oZ9Kp5NX8Hv5
XWZVGdLC6gGJ
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
CxQaH6qDB9bC
dknfVe6BK8aP
f6YSioLdAWpr
kx7BHU7ZycYE
Mk6ShCGm6RBJ
oZ9Kp5NX8Hv5
XWZVGdLC6gGJ
iezFbUdmY3A6
S9vNeQQYrhac
JkWoGWVwjNda
a7o5Kmjr4Tdp
Yfn77uLS5tv8