General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000461838
Gene ID:	ENSG00000122033
Gene Name:	MTIF3
Sequence (UNICHARACTER ENCODING)	CCGCCGACUUACCAACAACCGGGUCGGGGGCUCCCGGAAGUGCUCUUGCGGCUUACUGCCUGGCACAGAAGAGCUUCUCCUCAUCAACUGGGGAUGAUUACAGUUCUUCCUAAAAAAGGAUGGCUGCUCUUUUUCUAAAGAGGUUAЖCACUACAAЖCUGUAAAGUCUGAAAAUAGUUGCAUUAGAUGUUUUGGUAAЖCACAPCCUGCAAAAGЖCAGCACCAGCACAGUUGUCCCCUAUUGCUUCUGCCCCAAGЖCUCUCCUUCCUAAUUCAUGCAAAAGCCUPUAGUACCGCUGAAGACACCCAGAAUGAAGGAAAAAAGACAAAAAAGAAUAAAACAGCUUUUAGUAACGUUGGAAGAAAAAUUAGUCAGCGAGUUAUUCACUUAUUUGAUGAGAAGGGCAAUGAUUUGGGAAACAUGCACCGAGCAAAUGUGAUUAGЖCUUAUGGAUGAGCGAGЖCCUGCGACUGGUUCAAAGGAACACCAGCACAGAACCUGCAGAGUAUCAGCUCAUGACAGGAUUGCAGAUCCPCCAGGAGCGGCAGAGGCUGAGGGAGAUGGAGAAGGCGAACCCCAAAACUGGACCAACCCUGAGAAAGGAACUGAUUUUGUCUUCAAAUAUUGGACAACAUGAUPUGGACACAAAGACUAAЖCAGAUUCAGCAGUGGAUUAAGAAAAAACACCUAGUCCAGAUUACCAPAAAGAAAGGAAAAAAUGUAGACGUGUCAGAAAAUGAAAUGGAGGAGAUAUUUCAUCAAAUACUCCAGACUAUGCCUGGAAUAGCUACAUUCUCAUCUAGGCCACAAGCUGUUCAAGGAGGAAAAGCUPUAAUGUGUGUUCUUCGUGCUUUCAGCAAAAAUGAGGAGAAGGCAUAUAAAGAAACUCAAGAGACCCAGGAAAGAGЖCACUUUGAACAAAGACCAUGGAAAUGAUAAGGAAUCAAAUGUUCUG
Sequence (SHORT NAMES ENCODING)	CCGCCGACUUACCAACAACCGGGUCGGGGGCUCCCGGAAGUGCUCUUGCGGCUUACUGCCUGGCACAGAAGAGCUUCUCCUCAUCAACUGGGGAUGAUUACAGUUCUUCCUAAAAAAGGAUGGCUGCUCUUUUUCUAAAGAGGUUAm6ACACUACAAm6ACUGUAAAGUCUGAAAAUAGUUGCAUUAGAUGUUUUGGUAAm6ACACAYCCUGCAAAAGm6ACAGCACCAGCACAGUUGUCCCCUAUUGCUUCUGCCCCAAGm6ACUCUCCUUCCUAAUUCAUGCAAAAGCCUYUAGUACCGCUGAAGACACCCAGAAUGAAGGAAAAAAGACAAAAAAGAAUAAAACAGCUUUUAGUAACGUUGGAAGAAAAAUUAGUCAGCGAGUUAUUCACUUAUUUGAUGAGAAGGGCAAUGAUUUGGGAAACAUGCACCGAGCAAAUGUGAUUAGm6ACUUAUGGAUGAGCGAGm6ACCUGCGACUGGUUCAAAGGAACACCAGCACAGAACCUGCAGAGUAUCAGCUCAUGACAGGAUUGCAGAUCCYCCAGGAGCGGCAGAGGCUGAGGGAGAUGGAGAAGGCGAACCCCAAAACUGGACCAACCCUGAGAAAGGAACUGAUUUUGUCUUCAAAUAUUGGACAACAUGAUYUGGACACAAAGACUAAm6ACAGAUUCAGCAGUGGAUUAAGAAAAAACACCUAGUCCAGAUUACCAYAAAGAAAGGAAAAAAUGUAGACGUGUCAGAAAAUGAAAUGGAGGAGAUAUUUCAUCAAAUACUCCAGACUAUGCCUGGAAUAGCUACAUUCUCAUCUAGGCCACAAGCUGUUCAAGGAGGAAAAGCUYUAAUGUGUGUUCUUCGUGCUUUCAGCAAAAAUGAGGAGAAGGCAUAUAAAGAAACUCAAGAGACCCAGGAAAGAGm6ACACUUUGAACAAAGACCAUGGAAAUGAUAAGGAAUCAAAUGUUCUG
Sequence (MODOMICS CODE ENCODING)	CCGCCGACUUACCAACAACCGGGUCGGGGGCUCCCGGAAGUGCUCUUGCGGCUUACUGCCUGGCACAGAAGAGCUUCUCCUCAUCAACUGGGGAUGAUUACAGUUCUUCCUAAAAAAGGAUGGCUGCUCUUUUUCUAAAGAGGUUA2000000006ACACUACAA2000000006ACUGUAAAGUCUGAAAAUAGUUGCAUUAGAUGUUUUGGUAA2000000006ACACA2000000009UCCUGCAAAAG2000000006ACAGCACCAGCACAGUUGUCCCCUAUUGCUUCUGCCCCAAG2000000006ACUCUCCUUCCUAAUUCAUGCAAAAGCCU2000000009UUAGUACCGCUGAAGACACCCAGAAUGAAGGAAAAAAGACAAAAAAGAAUAAAACAGCUUUUAGUAACGUUGGAAGAAAAAUUAGUCAGCGAGUUAUUCACUUAUUUGAUGAGAAGGGCAAUGAUUUGGGAAACAUGCACCGAGCAAAUGUGAUUAG2000000006ACUUAUGGAUGAGCGAG2000000006ACCUGCGACUGGUUCAAAGGAACACCAGCACAGAACCUGCAGAGUAUCAGCUCAUGACAGGAUUGCAGAUCC2000000009UCCAGGAGCGGCAGAGGCUGAGGGAGAUGGAGAAGGCGAACCCCAAAACUGGACCAACCCUGAGAAAGGAACUGAUUUUGUCUUCAAAUAUUGGACAACAUGAU2000000009UUGGACACAAAGACUAA2000000006ACAGAUUCAGCAGUGGAUUAAGAAAAAACACCUAGUCCAGAUUACCA2000000009UAAAGAAAGGAAAAAAUGUAGACGUGUCAGAAAAUGAAAUGGAGGAGAUAUUUCAUCAAAUACUCCAGACUAUGCCUGGAAUAGCUACAUUCUCAUCUAGGCCACAAGCUGUUCAAGGAGGAAAAGCU2000000009UUAAUGUGUGUUCUUCGUGCUUUCAGCAAAAAUGAGGAGAAGGCAUAUAAAGAAACUCAAGAGACCCAGGAAAGAG2000000006ACACUUUGAACAAAGACCAUGGAAAUGAUAAGGAAUCAAAUGUUCUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	147	156	197	202	213	254	283	440	457	529	633	650	697	825	901
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	Y	m6A	m6A	Y	Y	m6A	Y	Y	m6A
Genomic Coordinates	13:27440421:-	13:27440412:-	13:27440371:-	13:27440366:-	13:27440355:-	13:27440314:-	13:27440285:-	13:27440128:-	13:27440111:-	13:27440039:-	13:27437220:-	13:27437203:-	13:27437156:-	13:27435806:-	13:27435730:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 nfCHyrYzE6fB BsCW7emuRX7M Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6UuHp6YApVKv VyCX26p5UBRL BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8