General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000465952
Gene ID:	ENSG00000132952
Gene Name:	USPL1
Sequence (UNICHARACTER ENCODING)	CCCAAACCCAGCCACUCACACAUGGCGGGCUCAGCAGCCACCGGCCCCGCCCCUCCUCGUCGCCGCAGUCGCAACUGCGUCUGCGGCCACAGGGCGGACAGCCACGCCUCUGCGGAGGGCGACCGGAAGUGCUCACGUCUUCACCUUCCCCGCCACGCCACCGUCCUUUCAGGCCCAGCGUGCAGCAGGAAGGAGGACUCUUUUGCCGCGGACUCAAGCCGGAAGCCGCCUUCCUAGUGGAGACGCGAGUGGGGGAGGAGCAGUCCGAGGGGAACGUGGGUUGAACGUUGCAACUAGGGUGGAGAUCAAGCUGGAACAGGAGUUCCGAUCGACCCGGUACCAAGAAGGGGAGUGCCCGCGGCAGAAUUUUGAUUCAGCUAAAGUUCCAUCAGAUGAGUAUUGCCCUGCUUGUAGAGAGAAGGGAAAGUUAAAAGCCUUAAAGACUUACCGAAUUAGUUUUCAAGAAUCUAUCUUUUUGUGUGAGGAUCUGCAGUGCAUCUAUCCUUUGGGCUCUAAAUCACUUAAUAACCUAAUUUCUCCUGAUUUGGAAGAAUGUCACACUCCACAUAAGCCUCAGAAAAGGAAGAGCUUAGAAAGCAGCUAUAAGGAUUCACUUCUUUUAGCAAAUUCCAAAAAGACUAGAAAUUAUAUUGCUAUUGACGGUGGAAAAGUUUUGAACAGCAAACAUAAUGGAGAAGUAUAUGACGAAACCUCGUCAAACUUACCUGAUAGUAGUGGUCAACAGAAUCCAAUUAGGЖCAGCUGAUUCCUUGGAGCGGAAUGAGAUUUUGGAAGCUGAUACUGUUGACAUGGCUACUACAAAAGAUCCUGCUACAGUUGAUGUCUCUGGAЖCUGGCAGACCUUCCCCUCAAAAUGAAGGAUGUACAUCUAAЖCUGGAAAUGCCACUGGAGAGCAAAUGUACAUCAUUUCCCCAGGCUUUAUGUGUCCAGUGGAAAAAUGCUUAUGCUCUCUGUUGGUUAGЖCUGUAUCCUGUCAGCUUUGGUGCACUCGGAAGAGUUAAAGAACACCGUGACUGGЖCUGUGCUCGAAGGAGGAAUCUAUAUUCUGGCGGUUGCUUACAAAAUAUAAUCAAGCAAAUACACUUCUAUAUACCAGUCAAUUGAGUGGUGUUAAAG
Sequence (SHORT NAMES ENCODING)	CCCAAACCCAGCCACUCACACAUGGCGGGCUCAGCAGCCACCGGCCCCGCCCCUCCUCGUCGCCGCAGUCGCAACUGCGUCUGCGGCCACAGGGCGGACAGCCACGCCUCUGCGGAGGGCGACCGGAAGUGCUCACGUCUUCACCUUCCCCGCCACGCCACCGUCCUUUCAGGCCCAGCGUGCAGCAGGAAGGAGGACUCUUUUGCCGCGGACUCAAGCCGGAAGCCGCCUUCCUAGUGGAGACGCGAGUGGGGGAGGAGCAGUCCGAGGGGAACGUGGGUUGAACGUUGCAACUAGGGUGGAGAUCAAGCUGGAACAGGAGUUCCGAUCGACCCGGUACCAAGAAGGGGAGUGCCCGCGGCAGAAUUUUGAUUCAGCUAAAGUUCCAUCAGAUGAGUAUUGCCCUGCUUGUAGAGAGAAGGGAAAGUUAAAAGCCUUAAAGACUUACCGAAUUAGUUUUCAAGAAUCUAUCUUUUUGUGUGAGGAUCUGCAGUGCAUCUAUCCUUUGGGCUCUAAAUCACUUAAUAACCUAAUUUCUCCUGAUUUGGAAGAAUGUCACACUCCACAUAAGCCUCAGAAAAGGAAGAGCUUAGAAAGCAGCUAUAAGGAUUCACUUCUUUUAGCAAAUUCCAAAAAGACUAGAAAUUAUAUUGCUAUUGACGGUGGAAAAGUUUUGAACAGCAAACAUAAUGGAGAAGUAUAUGACGAAACCUCGUCAAACUUACCUGAUAGUAGUGGUCAACAGAAUCCAAUUAGGm6ACAGCUGAUUCCUUGGAGCGGAAUGAGAUUUUGGAAGCUGAUACUGUUGACAUGGCUACUACAAAAGAUCCUGCUACAGUUGAUGUCUCUGGAm6ACUGGCAGACCUUCCCCUCAAAAUGAAGGAUGUACAUCUAAm6ACUGGAAAUGCCACUGGAGAGCAAAUGUACAUCAUUUCCCCAGGCUUUAUGUGUCCAGUGGAAAAAUGCUUAUGCUCUCUGUUGGUUAGm6ACUGUAUCCUGUCAGCUUUGGUGCACUCGGAAGAGUUAAAGAACACCGUGACUGGm6ACUGUGCUCGAAGGAGGAAUCUAUAUUCUGGCGGUUGCUUACAAAAUAUAAUCAAGCAAAUACACUUCUAUAUACCAGUCAAUUGAGUGGUGUUAAAG
Sequence (MODOMICS CODE ENCODING)	CCCAAACCCAGCCACUCACACAUGGCGGGCUCAGCAGCCACCGGCCCCGCCCCUCCUCGUCGCCGCAGUCGCAACUGCGUCUGCGGCCACAGGGCGGACAGCCACGCCUCUGCGGAGGGCGACCGGAAGUGCUCACGUCUUCACCUUCCCCGCCACGCCACCGUCCUUUCAGGCCCAGCGUGCAGCAGGAAGGAGGACUCUUUUGCCGCGGACUCAAGCCGGAAGCCGCCUUCCUAGUGGAGACGCGAGUGGGGGAGGAGCAGUCCGAGGGGAACGUGGGUUGAACGUUGCAACUAGGGUGGAGAUCAAGCUGGAACAGGAGUUCCGAUCGACCCGGUACCAAGAAGGGGAGUGCCCGCGGCAGAAUUUUGAUUCAGCUAAAGUUCCAUCAGAUGAGUAUUGCCCUGCUUGUAGAGAGAAGGGAAAGUUAAAAGCCUUAAAGACUUACCGAAUUAGUUUUCAAGAAUCUAUCUUUUUGUGUGAGGAUCUGCAGUGCAUCUAUCCUUUGGGCUCUAAAUCACUUAAUAACCUAAUUUCUCCUGAUUUGGAAGAAUGUCACACUCCACAUAAGCCUCAGAAAAGGAAGAGCUUAGAAAGCAGCUAUAAGGAUUCACUUCUUUUAGCAAAUUCCAAAAAGACUAGAAAUUAUAUUGCUAUUGACGGUGGAAAAGUUUUGAACAGCAAACAUAAUGGAGAAGUAUAUGACGAAACCUCGUCAAACUUACCUGAUAGUAGUGGUCAACAGAAUCCAAUUAGG2000000006ACAGCUGAUUCCUUGGAGCGGAAUGAGAUUUUGGAAGCUGAUACUGUUGACAUGGCUACUACAAAAGAUCCUGCUACAGUUGAUGUCUCUGGA2000000006ACUGGCAGACCUUCCCCUCAAAAUGAAGGAUGUACAUCUAA2000000006ACUGGAAAUGCCACUGGAGAGCAAAUGUACAUCAUUUCCCCAGGCUUUAUGUGUCCAGUGGAAAAAUGCUUAUGCUCUCUGUUGGUUAG2000000006ACUGUAUCCUGUCAGCUUUGGUGCACUCGGAAGAGUUAAAGAACACCGUGACUGG2000000006ACUGUGCUCGAAGGAGGAAUCUAUAUUCUGGCGGUUGCUUACAAAAUAUAAUCAAGCAAAUACACUUCUAUAUACCAGUCAAUUGAGUGGUGUUAAAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	758	851	892	981	1036
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	13:30631099:+	13:30631192:+	13:30631233:+	13:30631322:+	13:30631377:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL nfCHyrYzE6fB BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	3TeAZFYFxgvp 5FhTyQVy2tKW 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G