General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000255476
Gene ID:	ENSG00000133111
Gene Name:	RFXAP
Sequence (UNICHARACTER ENCODING)	AGGCGCAGUCGGGGCGCCUUCCCGGUAUAGGCGCCUUUUACCCCAGCGUGUCCUGAGUCUUUGGUUCGCGAAGUGCCGUUAGGCCAAGCAGGUGCUAAAAGCCCGGGGUCGUGGACCCCGGCCAGGUCUUAGCAGCAUGGAGGCGCAGGGUGUAGCGGAGGGCGCGGGGCCGGGCGCCGCCAGCGGCGUGCCCCACCCCGCGGCCCUAGCCCCGGCUGCGGCUCCCACCUUGGCGCCAGCCUCGGUGGCGGCCGCGGCCUCUCAAUUCACCCUGCUAGUGAUGCAACCCUGUGCUGGGCAGGACGAGGCUGCGGCCCCCGGGGGCAGCGUUGGGGCGGGCAAGCCCGUUAGGUACCUGUGCGAAGGGGCCGGGGAUGGCGAAGAGGAGGCUGGGGAGGACGAGGCGGACCUGUUAGACACUUCGGЖCCCUCCGGGGGGAGGCGAGAGCGCGGCUAGUUUGGAGGAUCUAGAGGACGAGGAGACUCACUCGGGGGGCGAGGGCAGCAGCGGGGGCGCCCGGAGGCGGGGCAGCGGUGGGGGCAGCAUGAGCAAGACCUGCACCUACGAAGGCUGCAGCGAGЖCCACGAGCCAGGUGGCCAAGCAGCGCAAACCGUGGAUGUGCAAGAAACACCGCAACAAGAUGUACAAGGACAAGUAUAAAAAGAAGAAGAGCGACCAGGCCCUGAACUGCGGUGGGACUGCCUCGACUGGCAGCGCGGGAAACGUCAAACUCGAGGAAAGUGCAGAUAЖCAUACUCUCCAUUGUUAAACAAAGAACAGGAUCUUUUGGGGAUCGUCCUGCAAGACCUACUCUUUUAGAACAAGUGUUAAAUCAAAAAAGЖCUGUCGUUACUAAGAAGUCCAGAAGUAGUGCAAUUUUUACAGAAЖCAGCAACAGCUAUUAAAUCAGCAAGUUUUGGAGCAAAGACAACAGCAGUUUCCAGGAACAUCAAUGUGAGGGAACUUACCAAGAACAUCUACAUGGUUUUUUAUCUUAUUGUAAUAGAUGAGCAUAUUUUUUUACCAGACAUAAAUGGGGUAAUAAUCUAUGCCUGUAGAACAUAAACAUUUUCCUGUAAAUGUAUGUGUGCAUUUGGGGAUAAGUAAGUAUUGCACUUUGUGCAUCUAAUCUUUCAGAUUACUGUGAGUUUGAAGAAGUCAGCUUAUCUUUCCAAAUAACAUUUAAUUAUAAUGUUUUUUAAAAAAUAUAUUCCUCUUCAGUCAUUGUUACUGAAGGUAAUGAAGCAGUUACUUUCUGUGGAAGUCAUAAAGUUAAUAGAUAUUAAUCUUGACUCAUCUAGCUCAGUGGUUCUCAUCAAGGGUCAAUUUGAUUGUCAUAGUGACCUUGAAAACCACUGGCUUUUAGUGAGUGGCCAGGAAUGCUAAAUGUUCUGCAGUGUCAGGGGUAGUCCCACAUACUAAAGAUUGUCUCACCCGCAGUGCCAAUAACACUCCUAAGAAAUGUUGAUGGCUAUUUUGUGGUGCUAЖCAUGUAGUUGGGGCACCUAPAAUUGGGUUCUCUUAAUAACCUUUCUUUGCAGUUAAGACUGAAGCUGUCAAAGAGGUAAGCACAUUUUAUAUAGACGUAAGGAAAGUGAUUAUUGUUUAAUAUCUGUGAAUUUAGGAUGUGCAUCUCUUUUCAGAGGUGUGUUAGUAAAACCUGACGGAUUAЖCUAAGCACACUGGGAUGUGUCUCCUACAGUUGGCUUCUCUCUUUGAUGUUACCUGUUAGUGCUGAUCUCUUAAAGCAGACAUUUCUUGUUUGUUGAAUUUGUGAACAGUAUAGAUCUCAGCCCACCAAUGCCAAGACAAAAUUAUUUUUCUUAUACUUAUUUUUUAUUAAACAAAAUGAAAAAGAUCCUUUUCAAAAAGGUGAUCCUGAAAAUAAAACUAACACUCCAGUAUUUUGUCAUUGUUUUUCGCAAUUGAGCUAUCUGAAAACUGUUAUUCCUAAGUAAUGUUCAAAAAUGAUAAGUAAUCUGGAUACCUUUUUCUUAUACUUUCUCCUAGGAAAACUPUAAAACUPUAAAAAGGCAAЖCCUACCAAUAGGAAUAACAAAUUAAAUGUCAAGAGAGUAUAUCCAAUAUUAGGAUAUAAAUGUAUGUGUCUCAAGUUUAЖCUCUACAAAAAUUUGUUACUUGUUUUUUAAACUCUAUAUAUAAAGUUCGACUUAAUCAUGGCUGUUCUAAGAAGUACUUAUGGAGAGCAAGAACGUUUUUGUUCAUUUCUUAAUGUGUGUGUUUUUACUUGCAUAUCUGUUCAAAACACUUUUAACAAAAUUAAUUCAUUAAAGUCCAGUUGUUGACCUUUGA
Sequence (SHORT NAMES ENCODING)	AGGCGCAGUCGGGGCGCCUUCCCGGUAUAGGCGCCUUUUACCCCAGCGUGUCCUGAGUCUUUGGUUCGCGAAGUGCCGUUAGGCCAAGCAGGUGCUAAAAGCCCGGGGUCGUGGACCCCGGCCAGGUCUUAGCAGCAUGGAGGCGCAGGGUGUAGCGGAGGGCGCGGGGCCGGGCGCCGCCAGCGGCGUGCCCCACCCCGCGGCCCUAGCCCCGGCUGCGGCUCCCACCUUGGCGCCAGCCUCGGUGGCGGCCGCGGCCUCUCAAUUCACCCUGCUAGUGAUGCAACCCUGUGCUGGGCAGGACGAGGCUGCGGCCCCCGGGGGCAGCGUUGGGGCGGGCAAGCCCGUUAGGUACCUGUGCGAAGGGGCCGGGGAUGGCGAAGAGGAGGCUGGGGAGGACGAGGCGGACCUGUUAGACACUUCGGm6ACCCUCCGGGGGGAGGCGAGAGCGCGGCUAGUUUGGAGGAUCUAGAGGACGAGGAGACUCACUCGGGGGGCGAGGGCAGCAGCGGGGGCGCCCGGAGGCGGGGCAGCGGUGGGGGCAGCAUGAGCAAGACCUGCACCUACGAAGGCUGCAGCGAGm6ACCACGAGCCAGGUGGCCAAGCAGCGCAAACCGUGGAUGUGCAAGAAACACCGCAACAAGAUGUACAAGGACAAGUAUAAAAAGAAGAAGAGCGACCAGGCCCUGAACUGCGGUGGGACUGCCUCGACUGGCAGCGCGGGAAACGUCAAACUCGAGGAAAGUGCAGAUAm6ACAUACUCUCCAUUGUUAAACAAAGAACAGGAUCUUUUGGGGAUCGUCCUGCAAGACCUACUCUUUUAGAACAAGUGUUAAAUCAAAAAAGm6ACUGUCGUUACUAAGAAGUCCAGAAGUAGUGCAAUUUUUACAGAAm6ACAGCAACAGCUAUUAAAUCAGCAAGUUUUGGAGCAAAGACAACAGCAGUUUCCAGGAACAUCAAUGUGAGGGAACUUACCAAGAACAUCUACAUGGUUUUUUAUCUUAUUGUAAUAGAUGAGCAUAUUUUUUUACCAGACAUAAAUGGGGUAAUAAUCUAUGCCUGUAGAACAUAAACAUUUUCCUGUAAAUGUAUGUGUGCAUUUGGGGAUAAGUAAGUAUUGCACUUUGUGCAUCUAAUCUUUCAGAUUACUGUGAGUUUGAAGAAGUCAGCUUAUCUUUCCAAAUAACAUUUAAUUAUAAUGUUUUUUAAAAAAUAUAUUCCUCUUCAGUCAUUGUUACUGAAGGUAAUGAAGCAGUUACUUUCUGUGGAAGUCAUAAAGUUAAUAGAUAUUAAUCUUGACUCAUCUAGCUCAGUGGUUCUCAUCAAGGGUCAAUUUGAUUGUCAUAGUGACCUUGAAAACCACUGGCUUUUAGUGAGUGGCCAGGAAUGCUAAAUGUUCUGCAGUGUCAGGGGUAGUCCCACAUACUAAAGAUUGUCUCACCCGCAGUGCCAAUAACACUCCUAAGAAAUGUUGAUGGCUAUUUUGUGGUGCUAm6ACAUGUAGUUGGGGCACCUAYAAUUGGGUUCUCUUAAUAACCUUUCUUUGCAGUUAAGACUGAAGCUGUCAAAGAGGUAAGCACAUUUUAUAUAGACGUAAGGAAAGUGAUUAUUGUUUAAUAUCUGUGAAUUUAGGAUGUGCAUCUCUUUUCAGAGGUGUGUUAGUAAAACCUGACGGAUUAm6ACUAAGCACACUGGGAUGUGUCUCCUACAGUUGGCUUCUCUCUUUGAUGUUACCUGUUAGUGCUGAUCUCUUAAAGCAGACAUUUCUUGUUUGUUGAAUUUGUGAACAGUAUAGAUCUCAGCCCACCAAUGCCAAGACAAAAUUAUUUUUCUUAUACUUAUUUUUUAUUAAACAAAAUGAAAAAGAUCCUUUUCAAAAAGGUGAUCCUGAAAAUAAAACUAACACUCCAGUAUUUUGUCAUUGUUUUUCGCAAUUGAGCUAUCUGAAAACUGUUAUUCCUAAGUAAUGUUCAAAAAUGAUAAGUAAUCUGGAUACCUUUUUCUUAUACUUUCUCCUAGGAAAACUYUAAAACUYUAAAAAGGCAAm6ACCUACCAAUAGGAAUAACAAAUUAAAUGUCAAGAGAGUAUAUCCAAUAUUAGGAUAUAAAUGUAUGUGUCUCAAGUUUAm6ACUCUACAAAAAUUUGUUACUUGUUUUUUAAACUCUAUAUAUAAAGUUCGACUUAAUCAUGGCUGUUCUAAGAAGUACUUAUGGAGAGCAAGAACGUUUUUGUUCAUUUCUUAAUGUGUGUGUUUUUACUUGCAUAUCUGUUCAAAACACUUUUAACAAAAUUAAUUCAUUAAAGUCCAGUUGUUGACCUUUGA
Sequence (MODOMICS CODE ENCODING)	AGGCGCAGUCGGGGCGCCUUCCCGGUAUAGGCGCCUUUUACCCCAGCGUGUCCUGAGUCUUUGGUUCGCGAAGUGCCGUUAGGCCAAGCAGGUGCUAAAAGCCCGGGGUCGUGGACCCCGGCCAGGUCUUAGCAGCAUGGAGGCGCAGGGUGUAGCGGAGGGCGCGGGGCCGGGCGCCGCCAGCGGCGUGCCCCACCCCGCGGCCCUAGCCCCGGCUGCGGCUCCCACCUUGGCGCCAGCCUCGGUGGCGGCCGCGGCCUCUCAAUUCACCCUGCUAGUGAUGCAACCCUGUGCUGGGCAGGACGAGGCUGCGGCCCCCGGGGGCAGCGUUGGGGCGGGCAAGCCCGUUAGGUACCUGUGCGAAGGGGCCGGGGAUGGCGAAGAGGAGGCUGGGGAGGACGAGGCGGACCUGUUAGACACUUCGG2000000006ACCCUCCGGGGGGAGGCGAGAGCGCGGCUAGUUUGGAGGAUCUAGAGGACGAGGAGACUCACUCGGGGGGCGAGGGCAGCAGCGGGGGCGCCCGGAGGCGGGGCAGCGGUGGGGGCAGCAUGAGCAAGACCUGCACCUACGAAGGCUGCAGCGAG2000000006ACCACGAGCCAGGUGGCCAAGCAGCGCAAACCGUGGAUGUGCAAGAAACACCGCAACAAGAUGUACAAGGACAAGUAUAAAAAGAAGAAGAGCGACCAGGCCCUGAACUGCGGUGGGACUGCCUCGACUGGCAGCGCGGGAAACGUCAAACUCGAGGAAAGUGCAGAUA2000000006ACAUACUCUCCAUUGUUAAACAAAGAACAGGAUCUUUUGGGGAUCGUCCUGCAAGACCUACUCUUUUAGAACAAGUGUUAAAUCAAAAAAG2000000006ACUGUCGUUACUAAGAAGUCCAGAAGUAGUGCAAUUUUUACAGAA2000000006ACAGCAACAGCUAUUAAAUCAGCAAGUUUUGGAGCAAAGACAACAGCAGUUUCCAGGAACAUCAAUGUGAGGGAACUUACCAAGAACAUCUACAUGGUUUUUUAUCUUAUUGUAAUAGAUGAGCAUAUUUUUUUACCAGACAUAAAUGGGGUAAUAAUCUAUGCCUGUAGAACAUAAACAUUUUCCUGUAAAUGUAUGUGUGCAUUUGGGGAUAAGUAAGUAUUGCACUUUGUGCAUCUAAUCUUUCAGAUUACUGUGAGUUUGAAGAAGUCAGCUUAUCUUUCCAAAUAACAUUUAAUUAUAAUGUUUUUUAAAAAAUAUAUUCCUCUUCAGUCAUUGUUACUGAAGGUAAUGAAGCAGUUACUUUCUGUGGAAGUCAUAAAGUUAAUAGAUAUUAAUCUUGACUCAUCUAGCUCAGUGGUUCUCAUCAAGGGUCAAUUUGAUUGUCAUAGUGACCUUGAAAACCACUGGCUUUUAGUGAGUGGCCAGGAAUGCUAAAUGUUCUGCAGUGUCAGGGGUAGUCCCACAUACUAAAGAUUGUCUCACCCGCAGUGCCAAUAACACUCCUAAGAAAUGUUGAUGGCUAUUUUGUGGUGCUA2000000006ACAUGUAGUUGGGGCACCUA2000000009UAAUUGGGUUCUCUUAAUAACCUUUCUUUGCAGUUAAGACUGAAGCUGUCAAAGAGGUAAGCACAUUUUAUAUAGACGUAAGGAAAGUGAUUAUUGUUUAAUAUCUGUGAAUUUAGGAUGUGCAUCUCUUUUCAGAGGUGUGUUAGUAAAACCUGACGGAUUA2000000006ACUAAGCACACUGGGAUGUGUCUCCUACAGUUGGCUUCUCUCUUUGAUGUUACCUGUUAGUGCUGAUCUCUUAAAGCAGACAUUUCUUGUUUGUUGAAUUUGUGAACAGUAUAGAUCUCAGCCCACCAAUGCCAAGACAAAAUUAUUUUUCUUAUACUUAUUUUUUAUUAAACAAAAUGAAAAAGAUCCUUUUCAAAAAGGUGAUCCUGAAAAUAAAACUAACACUCCAGUAUUUUGUCAUUGUUUUUCGCAAUUGAGCUAUCUGAAAACUGUUAUUCCUAAGUAAUGUUCAAAAAUGAUAAGUAAUCUGGAUACCUUUUUCUUAUACUUUCUCCUAGGAAAACU2000000009UUAAAACU2000000009UUAAAAAGGCAA2000000006ACCUACCAAUAGGAAUAACAAAUUAAAUGUCAAGAGAGUAUAUCCAAUAUUAGGAUAUAAAUGUAUGUGUCUCAAGUUUA2000000006ACUCUACAAAAAUUUGUUACUUGUUUUUUAAACUCUAUAUAUAAAGUUCGACUUAAUCAUGGCUGUUCUAAGAAGUACUUAUGGAGAGCAAGAACGUUUUUGUUCAUUUCUUAAUGUGUGUGUUUUUACUUGCAUAUCUGUUCAAAACACUUUUAACAAAAUUAAUUCAUUAAAGUCCAGUUGUUGACCUUUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	426	581	750	841	886	1485	1505	1668	2013	2021	2033	2113
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	Y	Y	m6A	m6A
Genomic Coordinates	13:36819647:+	13:36819802:+	13:36825441:+	13:36825532:+	13:36827684:+	13:36828283:+	13:36828303:+	13:36828466:+	13:36828811:+	13:36828819:+	13:36828831:+	13:36828911:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	VyCX26p5UBRL 93arJtwJmuS9 BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8