General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000472888
Gene ID:	ENSG00000133111
Gene Name:	RFXAP
Sequence (UNICHARACTER ENCODING)	AGGAAAGUGCAGAUAЖCAUACUCUCCAUUGUUAAACAAAGAACAGGAUCUUUUGGGGAUCGUCCUGCAAGACCUACUCUUUUAGAACAAGUGUUAAAUCAAAAAAGЖCUGUCGUUACUAAGAAGUCCAGAAGUAGUGCAAUUUUUACAGAAЖCAGCAACAGCUAUUAAAUCAGCAAGUUUUGGAGCAAAGACAACAGCAGUUUCCAGGAACAUCAAUUUAAGACUGAAGCUGUCAAAGAGGAAAACUPUAAAACUPUAAAAAGGCAAЖCCUACCAAUAGGAAUAACAAAUUAAAUGUCAAGAGAGUAUAUCCAAUAUUAGGAUAUAAAUGUAUGUGUCUCAAGUUUAЖCUCUACAAAAAUUUGUUACUUGUUUUUUAAACUCUAUAUAUAAAGUUCGACUUAAUCAUGGCUGUUCUAAGAAGUACUUAUGGAGAGCAAGAACGUUUUUGUUCAUUUCUUAAUGUGUGUGUUUUUACUUGCAUAUCUGUUCAAAACACUUUUAACAAAAUUAAUUCAUUAAAGUCCAGUUGUUGA
Sequence (SHORT NAMES ENCODING)	AGGAAAGUGCAGAUAm6ACAUACUCUCCAUUGUUAAACAAAGAACAGGAUCUUUUGGGGAUCGUCCUGCAAGACCUACUCUUUUAGAACAAGUGUUAAAUCAAAAAAGm6ACUGUCGUUACUAAGAAGUCCAGAAGUAGUGCAAUUUUUACAGAAm6ACAGCAACAGCUAUUAAAUCAGCAAGUUUUGGAGCAAAGACAACAGCAGUUUCCAGGAACAUCAAUUUAAGACUGAAGCUGUCAAAGAGGAAAACUYUAAAACUYUAAAAAGGCAAm6ACCUACCAAUAGGAAUAACAAAUUAAAUGUCAAGAGAGUAUAUCCAAUAUUAGGAUAUAAAUGUAUGUGUCUCAAGUUUAm6ACUCUACAAAAAUUUGUUACUUGUUUUUUAAACUCUAUAUAUAAAGUUCGACUUAAUCAUGGCUGUUCUAAGAAGUACUUAUGGAGAGCAAGAACGUUUUUGUUCAUUUCUUAAUGUGUGUGUUUUUACUUGCAUAUCUGUUCAAAACACUUUUAACAAAAUUAAUUCAUUAAAGUCCAGUUGUUGA
Sequence (MODOMICS CODE ENCODING)	AGGAAAGUGCAGAUA2000000006ACAUACUCUCCAUUGUUAAACAAAGAACAGGAUCUUUUGGGGAUCGUCCUGCAAGACCUACUCUUUUAGAACAAGUGUUAAAUCAAAAAAG2000000006ACUGUCGUUACUAAGAAGUCCAGAAGUAGUGCAAUUUUUACAGAA2000000006ACAGCAACAGCUAUUAAAUCAGCAAGUUUUGGAGCAAAGACAACAGCAGUUUCCAGGAACAUCAAUUUAAGACUGAAGCUGUCAAAGAGGAAAACU2000000009UUAAAACU2000000009UUAAAAAGGCAA2000000006ACCUACCAAUAGGAAUAACAAAUUAAAUGUCAAGAGAGUAUAUCCAAUAUUAGGAUAUAAAUGUAUGUGUCUCAAGUUUA2000000006ACUCUACAAAAAUUUGUUACUUGUUUUUUAAACUCUAUAUAUAAAGUUCGACUUAAUCAUGGCUGUUCUAAGAAGUACUUAUGGAGAGCAAGAACGUUUUUGUUCAUUUCUUAAUGUGUGUGUUUUUACUUGCAUAUCUGUUCAAAACACUUUUAACAAAAUUAAUUCAUUAAAGUCCAGUUGUUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	16	107	152	248	256	268	348
Modification Positions	m6A	m6A	m6A	Y	Y	m6A	m6A
Genomic Coordinates	13:36825441:+	13:36825532:+	13:36827684:+	13:36828811:+	13:36828819:+	13:36828831:+	13:36828911:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	VyCX26p5UBRL 93arJtwJmuS9 BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8