General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000330317
Gene ID:	ENSG00000160193
Gene Name:	WDR4
Sequence (UNICHARACTER ENCODING)	CUGGCACAUGUGUAUGGCGGUGAGGCGGGCGGGUACAUGGCGGGCUCUGUGGGACUGGCGUUGUGCGGGCAGACGUUGGUGGUGCGGGGCGGCAGCCGAUUCCUGGCCACCPCCAUAGCAAGCAGUGAUGAUGACAGCCUCUUCAUCUAUGACUGCAGUGCUGCAGAAAAGAAGUCACAAGAAAAUAAAGGGGAGGACGCGCCCUUGGACCAGGGGAGCGGUGCGAUUCUGGCGUCCACCUUCUCCAAGUCUGGCAGCUAUUUUGCUPUAACCGAUGACAGUAAGCGUCUGAUUCUUUUCCGUACAAAACCAUGGCAAUGUCUGAGUGUCAGGACCGUGGCAAGGAGGUGUACAGCCCUGACUUUCAUAGCCUCGGAGGAGAAGGUCUUGGUGGCCGACAAGUCUGGAGACGUCUACUCCUUUUCGGUGCUGGAGCCACACGGGUGUGGCCGUCUAGAGCUGGGGCACCUGUCUAUGCUGUUAGAUGUGGCUGUGAGUCCUGAUGACCGCUUCAPCCUCACUGCCGACCGGGACGAGAAGAUCCGAGUCAGCUGGGCCGCGGCGCCCCAUAGCAUCGAGUCCUUCUGCUUGGGGCACACAGAGUUUGUGAGCCGUAUCUCCGUGGUGCCAACUCAGCCCGGGCUGCUUCUGUCCUCCUCUGGGGACGGCACCCUGAGGCUCUGGGAGUACAGGAGCGGCCGCCAGCUGCACUGCUGUCACCUGGCCAGUCUGCAGGAGCUGGUGGACCCCCAGGCCCCCCAGAAGUUUGCCGCGUCCAGGAUUGCAUUCUGGUGCCAGGAGAACUGCGUGGCGCUCCUGUGCGACGGCACUCCUGUGGUCUACAUCUUCCAGCUGGACGCCCGCAGACAGCAGUUGGUGUACAGGCAGCAGCUGGCGUUCCAGCACCAAGUGUGGGACGUGGCUUUCGAGGAGЖCCCAGGGGCUGUGGGUGCUCCAGGACUGCCAGGAAGCCCCCCUGGUGCUCUACAGGCCUGUGGGCGACCAGUGGCAGUCUGUUCCUGAGAGCACCGUGUUAAAGAAAGUCUCUGGUGUUCUUCGUGGGAACUGGGCCAUGCUGGAAGGCUCUGCCGGCGCAGACGCCAGCUUCAGCAGUCUCUACAAGGCCACGUUCGACAACGUGACCUCCUACCUGAAGAAGAAAGAGGAGAGACUGCAGCAGCAGCUAGAGAAGAAGCAGCGGCGCCGGAGUCCCCCGCCUGGGCCCGACGGGCAUGCCAAGAAGAUGAGЖCCGGGGGAGGCGACGCUAAGUUGCUGAUCGUGGCGGUCUGUUUCUGUCGACUGUGGACCACUUAUGUGCGAUCCGUGGACCACUUGCGUGCGAUCUGUCGGCCGACGAUGAGCUUGUUCGGAUGUAGCUCCAUCGUAAGUCGAGGAGCAUCUGUGAUPUGUCCUCUGCUUAUGGGAUAUGUUUUUCCGCUACUGAGUCUGUGUAGUAAAUUUUUGACUAGGAA
Sequence (SHORT NAMES ENCODING)	CUGGCACAUGUGUAUGGCGGUGAGGCGGGCGGGUACAUGGCGGGCUCUGUGGGACUGGCGUUGUGCGGGCAGACGUUGGUGGUGCGGGGCGGCAGCCGAUUCCUGGCCACCYCCAUAGCAAGCAGUGAUGAUGACAGCCUCUUCAUCUAUGACUGCAGUGCUGCAGAAAAGAAGUCACAAGAAAAUAAAGGGGAGGACGCGCCCUUGGACCAGGGGAGCGGUGCGAUUCUGGCGUCCACCUUCUCCAAGUCUGGCAGCUAUUUUGCUYUAACCGAUGACAGUAAGCGUCUGAUUCUUUUCCGUACAAAACCAUGGCAAUGUCUGAGUGUCAGGACCGUGGCAAGGAGGUGUACAGCCCUGACUUUCAUAGCCUCGGAGGAGAAGGUCUUGGUGGCCGACAAGUCUGGAGACGUCUACUCCUUUUCGGUGCUGGAGCCACACGGGUGUGGCCGUCUAGAGCUGGGGCACCUGUCUAUGCUGUUAGAUGUGGCUGUGAGUCCUGAUGACCGCUUCAYCCUCACUGCCGACCGGGACGAGAAGAUCCGAGUCAGCUGGGCCGCGGCGCCCCAUAGCAUCGAGUCCUUCUGCUUGGGGCACACAGAGUUUGUGAGCCGUAUCUCCGUGGUGCCAACUCAGCCCGGGCUGCUUCUGUCCUCCUCUGGGGACGGCACCCUGAGGCUCUGGGAGUACAGGAGCGGCCGCCAGCUGCACUGCUGUCACCUGGCCAGUCUGCAGGAGCUGGUGGACCCCCAGGCCCCCCAGAAGUUUGCCGCGUCCAGGAUUGCAUUCUGGUGCCAGGAGAACUGCGUGGCGCUCCUGUGCGACGGCACUCCUGUGGUCUACAUCUUCCAGCUGGACGCCCGCAGACAGCAGUUGGUGUACAGGCAGCAGCUGGCGUUCCAGCACCAAGUGUGGGACGUGGCUUUCGAGGAGm6ACCCAGGGGCUGUGGGUGCUCCAGGACUGCCAGGAAGCCCCCCUGGUGCUCUACAGGCCUGUGGGCGACCAGUGGCAGUCUGUUCCUGAGAGCACCGUGUUAAAGAAAGUCUCUGGUGUUCUUCGUGGGAACUGGGCCAUGCUGGAAGGCUCUGCCGGCGCAGACGCCAGCUUCAGCAGUCUCUACAAGGCCACGUUCGACAACGUGACCUCCUACCUGAAGAAGAAAGAGGAGAGACUGCAGCAGCAGCUAGAGAAGAAGCAGCGGCGCCGGAGUCCCCCGCCUGGGCCCGACGGGCAUGCCAAGAAGAUGAGm6ACCGGGGGAGGCGACGCUAAGUUGCUGAUCGUGGCGGUCUGUUUCUGUCGACUGUGGACCACUUAUGUGCGAUCCGUGGACCACUUGCGUGCGAUCUGUCGGCCGACGAUGAGCUUGUUCGGAUGUAGCUCCAUCGUAAGUCGAGGAGCAUCUGUGAUYUGUCCUCUGCUUAUGGGAUAUGUUUUUCCGCUACUGAGUCUGUGUAGUAAAUUUUUGACUAGGAA
Sequence (MODOMICS CODE ENCODING)	CUGGCACAUGUGUAUGGCGGUGAGGCGGGCGGGUACAUGGCGGGCUCUGUGGGACUGGCGUUGUGCGGGCAGACGUUGGUGGUGCGGGGCGGCAGCCGAUUCCUGGCCACC2000000009UCCAUAGCAAGCAGUGAUGAUGACAGCCUCUUCAUCUAUGACUGCAGUGCUGCAGAAAAGAAGUCACAAGAAAAUAAAGGGGAGGACGCGCCCUUGGACCAGGGGAGCGGUGCGAUUCUGGCGUCCACCUUCUCCAAGUCUGGCAGCUAUUUUGCU2000000009UUAACCGAUGACAGUAAGCGUCUGAUUCUUUUCCGUACAAAACCAUGGCAAUGUCUGAGUGUCAGGACCGUGGCAAGGAGGUGUACAGCCCUGACUUUCAUAGCCUCGGAGGAGAAGGUCUUGGUGGCCGACAAGUCUGGAGACGUCUACUCCUUUUCGGUGCUGGAGCCACACGGGUGUGGCCGUCUAGAGCUGGGGCACCUGUCUAUGCUGUUAGAUGUGGCUGUGAGUCCUGAUGACCGCUUCA2000000009UCCUCACUGCCGACCGGGACGAGAAGAUCCGAGUCAGCUGGGCCGCGGCGCCCCAUAGCAUCGAGUCCUUCUGCUUGGGGCACACAGAGUUUGUGAGCCGUAUCUCCGUGGUGCCAACUCAGCCCGGGCUGCUUCUGUCCUCCUCUGGGGACGGCACCCUGAGGCUCUGGGAGUACAGGAGCGGCCGCCAGCUGCACUGCUGUCACCUGGCCAGUCUGCAGGAGCUGGUGGACCCCCAGGCCCCCCAGAAGUUUGCCGCGUCCAGGAUUGCAUUCUGGUGCCAGGAGAACUGCGUGGCGCUCCUGUGCGACGGCACUCCUGUGGUCUACAUCUUCCAGCUGGACGCCCGCAGACAGCAGUUGGUGUACAGGCAGCAGCUGGCGUUCCAGCACCAAGUGUGGGACGUGGCUUUCGAGGAG2000000006ACCCAGGGGCUGUGGGUGCUCCAGGACUGCCAGGAAGCCCCCCUGGUGCUCUACAGGCCUGUGGGCGACCAGUGGCAGUCUGUUCCUGAGAGCACCGUGUUAAAGAAAGUCUCUGGUGUUCUUCGUGGGAACUGGGCCAUGCUGGAAGGCUCUGCCGGCGCAGACGCCAGCUUCAGCAGUCUCUACAAGGCCACGUUCGACAACGUGACCUCCUACCUGAAGAAGAAAGAGGAGAGACUGCAGCAGCAGCUAGAGAAGAAGCAGCGGCGCCGGAGUCCCCCGCCUGGGCCCGACGGGCAUGCCAAGAAGAUGAG2000000006ACCGGGGGAGGCGACGCUAAGUUGCUGAUCGUGGCGGUCUGUUUCUGUCGACUGUGGACCACUUAUGUGCGAUCCGUGGACCACUUGCGUGCGAUCUGUCGGCCGACGAUGAGCUUGUUCGGAUGUAGCUCCAUCGUAAGUCGAGGAGCAUCUGUGAU2000000009UUGUCCUCUGCUUAUGGGAUAUGUUUUUCCGCUACUGAGUCUGUGUAGUAAAUUUUUGACUAGGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	112	268	515	934	1248	1406
Modification Positions	Y	Y	Y	m6A	m6A	Y
Genomic Coordinates	21:42879420:-	21:42873615:-	21:42862369:-	21:42853646:-	21:42850076:-	21:42843159:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv msuJfBpJvM5H Q36pf44ZRvxu QpiKdbVikVz2 VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8