General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000380276
Gene ID:	ENSG00000160201
Gene Name:	U2AF1
Sequence (UNICHARACTER ENCODING)	CUCCCGAGGGCGUCGGCAGGGUCGGCGGCGUCGGCAGCAGUGUCGACGGCAGCGGCGGCGGCGGGUGGGAAAUGGCGGAGUAUCUGGCCUCCAUCUUCGGCACCGAGAAAGACAAAGUCAACUGUUCAUUUUAUUUCAAAAUUGGAGCAUGUCGUCAUGGAGACAGGUGCUCUCGGUUGCACAAUAAACCGACGUUUAGCCAGACCAUCUUGAUUCAAAACAUCUAUCGUAAUCCCCAAAACAGUGCACAGACGGCUGACGGCUCACACUGUGCCGUGAGCGAUGUGGAGAUGCAGGAACACUAUGAUGAGUUUUUUGAGGAGGUUUUUACЖGAAAUGGAGGAGAAGUAUGGGGAAGUAGAGGAGAUGAACGUCUGUGACAACCUGGGAGACCACCUGGUGGGGAЖCGUGUACGUCAAGUUUCGCCGUGAGGAAGAUGCGGAAAAGGCUGUGAUUGACUUGAAUAACCGUUGGUUUAAUGGACAGCCGAUCCACGCCGAGCUGUCACCCGUGACGGACUUCAGAGAAGCCUGCUGCCGUCAGUAUGAGAUGGGAGAAUGCACACGAGGCGGCUUCUGCAACUUCAUGCAUUUGAAGCCCAUUUCCЖGAGAGCUGCGGCGGGAGCUGUAUGGCCGCCGUCGCAAGAAGCAUAGAUCAAGAUCCCGAUCCCGGGAGCGUCGUUCUCGGUCUAGAGACCGUGGUCGUGGCGGUGGCGGUGGCGGUGGUGGAGGUGGCGGCGGACGGGAGCGUGACAGGAGGCGGUCGAGAGAUCGUGAAAGAUCUGGGCGAUUCUGAGCCAUGCCAUUUUUACCUUAUGUCUGCUAGAAAGUGUUGUAGUUGAJUGACCAAACCAGUUCAUAAGGGGAAUUUUUUUUAAAAAACAACAAAAAAAAAAACAUACAAAGAUGGGUUUCUGAAUAAAAUUUGUAGUGAUAACAGUA
Sequence (SHORT NAMES ENCODING)	CUCCCGAGGGCGUCGGCAGGGUCGGCGGCGUCGGCAGCAGUGUCGACGGCAGCGGCGGCGGCGGGUGGGAAAUGGCGGAGUAUCUGGCCUCCAUCUUCGGCACCGAGAAAGACAAAGUCAACUGUUCAUUUUAUUUCAAAAUUGGAGCAUGUCGUCAUGGAGACAGGUGCUCUCGGUUGCACAAUAAACCGACGUUUAGCCAGACCAUCUUGAUUCAAAACAUCUAUCGUAAUCCCCAAAACAGUGCACAGACGGCUGACGGCUCACACUGUGCCGUGAGCGAUGUGGAGAUGCAGGAACACUAUGAUGAGUUUUUUGAGGAGGUUUUUACm6AGAAAUGGAGGAGAAGUAUGGGGAAGUAGAGGAGAUGAACGUCUGUGACAACCUGGGAGACCACCUGGUGGGGAm6ACGUGUACGUCAAGUUUCGCCGUGAGGAAGAUGCGGAAAAGGCUGUGAUUGACUUGAAUAACCGUUGGUUUAAUGGACAGCCGAUCCACGCCGAGCUGUCACCCGUGACGGACUUCAGAGAAGCCUGCUGCCGUCAGUAUGAGAUGGGAGAAUGCACACGAGGCGGCUUCUGCAACUUCAUGCAUUUGAAGCCCAUUUCCm6AGAGAGCUGCGGCGGGAGCUGUAUGGCCGCCGUCGCAAGAAGCAUAGAUCAAGAUCCCGAUCCCGGGAGCGUCGUUCUCGGUCUAGAGACCGUGGUCGUGGCGGUGGCGGUGGCGGUGGUGGAGGUGGCGGCGGACGGGAGCGUGACAGGAGGCGGUCGAGAGAUCGUGAAAGAUCUGGGCGAUUCUGAGCCAUGCCAUUUUUACCUUAUGUCUGCUAGAAAGUGUUGUAGUUGAUmUGACCAAACCAGUUCAUAAGGGGAAUUUUUUUUAAAAAACAACAAAAAAAAAAACAUACAAAGAUGGGUUUCUGAAUAAAAUUUGUAGUGAUAACAGUA
Sequence (MODOMICS CODE ENCODING)	CUCCCGAGGGCGUCGGCAGGGUCGGCGGCGUCGGCAGCAGUGUCGACGGCAGCGGCGGCGGCGGGUGGGAAAUGGCGGAGUAUCUGGCCUCCAUCUUCGGCACCGAGAAAGACAAAGUCAACUGUUCAUUUUAUUUCAAAAUUGGAGCAUGUCGUCAUGGAGACAGGUGCUCUCGGUUGCACAAUAAACCGACGUUUAGCCAGACCAUCUUGAUUCAAAACAUCUAUCGUAAUCCCCAAAACAGUGCACAGACGGCUGACGGCUCACACUGUGCCGUGAGCGAUGUGGAGAUGCAGGAACACUAUGAUGAGUUUUUUGAGGAGGUUUUUAC2000000006AGAAAUGGAGGAGAAGUAUGGGGAAGUAGAGGAGAUGAACGUCUGUGACAACCUGGGAGACCACCUGGUGGGGA2000000006ACGUGUACGUCAAGUUUCGCCGUGAGGAAGAUGCGGAAAAGGCUGUGAUUGACUUGAAUAACCGUUGGUUUAAUGGACAGCCGAUCCACGCCGAGCUGUCACCCGUGACGGACUUCAGAGAAGCCUGCUGCCGUCAGUAUGAGAUGGGAGAAUGCACACGAGGCGGCUUCUGCAACUUCAUGCAUUUGAAGCCCAUUUCC2000000006AGAGAGCUGCGGCGGGAGCUGUAUGGCCGCCGUCGCAAGAAGCAUAGAUCAAGAUCCCGAUCCCGGGAGCGUCGUUCUCGGUCUAGAGACCGUGGUCGUGGCGGUGGCGGUGGCGGUGGUGGAGGUGGCGGCGGACGGGAGCGUGACAGGAGGCGGUCGAGAGAUCGUGAAAGAUCUGGGCGAUUCUGAGCCAUGCCAUUUUUACCUUAUGUCUGCUAGAAAGUGUUGUAGUUGA2000000090UUGACCAAACCAGUUCAUAAGGGGAAUUUUUUUUAAAAAACAACAAAAAAAAAAACAUACAAAGAUGGGUUUCUGAAUAAAAUUUGUAGUGAUAACAGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	332	406	606	841
Modification Positions	m6A	m6A	m6A	Um
Genomic Coordinates	21:43095525:-	21:43095451:-	21:43094511:-	21:43093055:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	jaSvBXBkn3xs jaSvBXBkn3xs jaSvBXBkn3xs jaSvBXBkn3xs YkSG92k4EHDM YkSG92k4EHDM YkSG92k4EHDM YkSG92k4EHDM