General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000669476
Gene ID:	ENSG00000215424
Gene Name:	MCM3AP-AS1
Sequence (UNICHARACTER ENCODING)	AGAGGCUUGCGUCCCGGGAGCCCGGCCUCGUGCGCCGCGCUUUGAGGACUUCCUAAAGCCAGUCCAGGAGCACAGUUUUUACCUGUUCAGUGGCACAUAUCUGUGAUUGAAACUCUGUUUUUGCAUCUUUAACCACUGAAGGAAGAAUGCAGCAGACUGCUCGACAAACACUGCGCCAAGAGCUCCUCAGCAGAAGCUCCUCGCAUCAGAUCCUCUGUGCUGGGAAUCCUCCCCUCUUGAGCACACUCUGUGCUCCUCUUCCAGUUACGGUGCAUGUGAAGCAAUGGUAUGGGAAAAUUGUUUGCAGAAGGAUGAAAAGGCUUUAUUGCCAAACUCUUAAGGUAUUUUGUUAAUAAAAUCAUUUUCAUAAUGGAAAAGACUCAGAAAAUUCCCCUCGCAUGACAUAUAACAUCCAACAAGGGGCUGAACCAAGAAAAAAUACUGCAGCUGCUGCUAAUGGCAACACUGAGCAAGCACCUGGCCUGUGCCAGGCACUGUCCUGUGCAGUCUGUGUUUGCACUCAUUUUAUCCUCAAGAGCCAGAUGAGCAUCUCCACCAGACAGCACCUGCAGAGGCUUGGGCAGUUUAUUUUACCGUCUCUGAGUAAAAUAGGGAUAAUAAGUAACAGUACCCAUACACAGGUGGCAGAGACGCUAGGGAACUUGCCCAAGGUCACAGAGCUUCCAAGUGGAGGAGCAGGGACACAUAUGCUCACAAUGAUGGCACUAAGGCACAUGUUGCCUGGAUGGAGACCAGCCCACAGAUGAGAGUUCCAGGACAGAGGGAACAUGGAUGGAUCAAGUGAAGUGACAGAACAUUUGGAAAACUCUACCGAGAUAUAUACGGCCCCCCAGUAAAAUUAAAGAGAUAAAGAGAACUACAUUAAGUGAGACAAUAAGGCAACUCUAUUUCUUGCAGGAAAAAAAUAAUUGUGGUUAUAGAACACUACUGGUUCUGAGGUGAAUAGCAGUCACAGAGCCAUCAAAAUAUGACCCCACUCACUGAAGUAAUACAAAGUGCUAGUGUAGCUAUCCCGGGAAGACGUGGAAGGCCGAGCAAGGACCAUGGCACAAGAGGCCACGCUGUACCUAGUAUGGUAUGCAGUGGCCAAGAGGACCCCCCUGAUUCCACCUAGUGUUCAUGCCCACGUGUGAUCUCCUGCCCCGUGAGCUGGGCCUAGCCACUCACUUCUGACAGACAGAAGCCAACAAAAGCAACAGGAUGUCACUUCUAAGUUUAGGUUAUAAACACACUCAGACUUCCAUCUAGGCUCACCUCUUGCUCACUCUGAUGAAAGCCAGCUGCCAUGCUGUCAGCUGGGGAGAGGCCCAUGUGGCAGGAЖCUGAGGAAGUCUUUGGCCACAGCCUGCAAGGAAGUGAAUCCUGACACAAGCUCACUAGAGUGAGCUGGGAAGUAGAUACCCUUCAGUCAAGCUUUCAGAUGAGGCCACAAUCCUAGCCAACAUUUUCAUUUCCACCCAUGAGAAACCUUGAGCCAGAAGACCCAAGCUAAGCUACACCUGGAUUCCUGACCCACAGAUACCAUGAUAACAGACAUUAUUUUAAGCUGCUAUGUUAGGAGUAAUUAGUUAUUUAGGAAUAAGGUAACUAAUACAUUUAUAUUAAUGGGAAGUCAGCAGAGAACAUUUAAAUGGAUAAACUGAGAAAUGGCUGUGUAAGUGUGUGAUCUGGAAACAGGAGAAAAAUGCAGCCCUGAAGAAAGGAGUUAAGAGAGGAAGGAGGAGCUACUAUGUCUCAUUUUAAAUCACGUGGGUGGCAUUAUUUGACUUCUUUUUAAGUACACGGAAGUGUUACUUUCUUAAAUGAAAAUGAAGGUAACAGCAGCAGUAAACUAAUUUCCAGUAGAUGAAAUGUGACUUUGUAAUCCCAGGAAAAGGGAAGAAUUUGCACCAAGAAGUUACUGUUACCUCAGAAUGGCAAGAGCAUGGAUGGCUCUUAUCAUCAUCUUUAUACUUCUUUUACAUUUCCUCAUUUUUUAAAAGUUUUGUGUACAUAUUACAUUUAGGAAAUCCAAUAUAUAGUAUUAAAACAGAAAAAGUAAAGAAGCAGGCUGGGCUUGGUGCCCACUACUCAAUUUGЖCUGGCUUAAAAAAAUUUUUUAAACGACAUGUACGGЖCAGACAUAAUACUUGCUUCUGAGCCUCCCAGUCUUUCAAAACCACAUUAGGGAAUAAGCAGUAUUUGCAUGGUUCCAGUGAUAUCUGGGAGUAAGUGAAAGUAAUGAAAACACAGAAGUAAACACAAAGUAAUUAUAGUUCACCUUUAUACACACGUUAACAGAAAUCAUCUGAUCCCCUUUGCUGCUAAGUGAGUUGAAAAGCGAAAGCGUCUGAAUCCCACCAGCAUCGCUGGAUGUGUCAUCCACUGAGCCUUCAUCUCCCAUGAЖCUUGЖCUUUUAACCAAUUUGCUAGAAUUCUACAGAUUUAAAAAAAACAAAAAACAAAAAAAACACUUGAAGAAUCUAAUUCUAUAUUUGAAUUAUAAAGACUUUCAGGAAAAGAAGAAAGAAAAAUAUCACACAGACCUAGGUCCACAAAUACCACAUCUUACUAUGAAGCUGAUCUGCACAAAACAGGCUGUUGUUUUAAAAUGGAGCAACGAUCU
Sequence (SHORT NAMES ENCODING)	AGAGGCUUGCGUCCCGGGAGCCCGGCCUCGUGCGCCGCGCUUUGAGGACUUCCUAAAGCCAGUCCAGGAGCACAGUUUUUACCUGUUCAGUGGCACAUAUCUGUGAUUGAAACUCUGUUUUUGCAUCUUUAACCACUGAAGGAAGAAUGCAGCAGACUGCUCGACAAACACUGCGCCAAGAGCUCCUCAGCAGAAGCUCCUCGCAUCAGAUCCUCUGUGCUGGGAAUCCUCCCCUCUUGAGCACACUCUGUGCUCCUCUUCCAGUUACGGUGCAUGUGAAGCAAUGGUAUGGGAAAAUUGUUUGCAGAAGGAUGAAAAGGCUUUAUUGCCAAACUCUUAAGGUAUUUUGUUAAUAAAAUCAUUUUCAUAAUGGAAAAGACUCAGAAAAUUCCCCUCGCAUGACAUAUAACAUCCAACAAGGGGCUGAACCAAGAAAAAAUACUGCAGCUGCUGCUAAUGGCAACACUGAGCAAGCACCUGGCCUGUGCCAGGCACUGUCCUGUGCAGUCUGUGUUUGCACUCAUUUUAUCCUCAAGAGCCAGAUGAGCAUCUCCACCAGACAGCACCUGCAGAGGCUUGGGCAGUUUAUUUUACCGUCUCUGAGUAAAAUAGGGAUAAUAAGUAACAGUACCCAUACACAGGUGGCAGAGACGCUAGGGAACUUGCCCAAGGUCACAGAGCUUCCAAGUGGAGGAGCAGGGACACAUAUGCUCACAAUGAUGGCACUAAGGCACAUGUUGCCUGGAUGGAGACCAGCCCACAGAUGAGAGUUCCAGGACAGAGGGAACAUGGAUGGAUCAAGUGAAGUGACAGAACAUUUGGAAAACUCUACCGAGAUAUAUACGGCCCCCCAGUAAAAUUAAAGAGAUAAAGAGAACUACAUUAAGUGAGACAAUAAGGCAACUCUAUUUCUUGCAGGAAAAAAAUAAUUGUGGUUAUAGAACACUACUGGUUCUGAGGUGAAUAGCAGUCACAGAGCCAUCAAAAUAUGACCCCACUCACUGAAGUAAUACAAAGUGCUAGUGUAGCUAUCCCGGGAAGACGUGGAAGGCCGAGCAAGGACCAUGGCACAAGAGGCCACGCUGUACCUAGUAUGGUAUGCAGUGGCCAAGAGGACCCCCCUGAUUCCACCUAGUGUUCAUGCCCACGUGUGAUCUCCUGCCCCGUGAGCUGGGCCUAGCCACUCACUUCUGACAGACAGAAGCCAACAAAAGCAACAGGAUGUCACUUCUAAGUUUAGGUUAUAAACACACUCAGACUUCCAUCUAGGCUCACCUCUUGCUCACUCUGAUGAAAGCCAGCUGCCAUGCUGUCAGCUGGGGAGAGGCCCAUGUGGCAGGAm6ACUGAGGAAGUCUUUGGCCACAGCCUGCAAGGAAGUGAAUCCUGACACAAGCUCACUAGAGUGAGCUGGGAAGUAGAUACCCUUCAGUCAAGCUUUCAGAUGAGGCCACAAUCCUAGCCAACAUUUUCAUUUCCACCCAUGAGAAACCUUGAGCCAGAAGACCCAAGCUAAGCUACACCUGGAUUCCUGACCCACAGAUACCAUGAUAACAGACAUUAUUUUAAGCUGCUAUGUUAGGAGUAAUUAGUUAUUUAGGAAUAAGGUAACUAAUACAUUUAUAUUAAUGGGAAGUCAGCAGAGAACAUUUAAAUGGAUAAACUGAGAAAUGGCUGUGUAAGUGUGUGAUCUGGAAACAGGAGAAAAAUGCAGCCCUGAAGAAAGGAGUUAAGAGAGGAAGGAGGAGCUACUAUGUCUCAUUUUAAAUCACGUGGGUGGCAUUAUUUGACUUCUUUUUAAGUACACGGAAGUGUUACUUUCUUAAAUGAAAAUGAAGGUAACAGCAGCAGUAAACUAAUUUCCAGUAGAUGAAAUGUGACUUUGUAAUCCCAGGAAAAGGGAAGAAUUUGCACCAAGAAGUUACUGUUACCUCAGAAUGGCAAGAGCAUGGAUGGCUCUUAUCAUCAUCUUUAUACUUCUUUUACAUUUCCUCAUUUUUUAAAAGUUUUGUGUACAUAUUACAUUUAGGAAAUCCAAUAUAUAGUAUUAAAACAGAAAAAGUAAAGAAGCAGGCUGGGCUUGGUGCCCACUACUCAAUUUGm6ACUGGCUUAAAAAAAUUUUUUAAACGACAUGUACGGm6ACAGACAUAAUACUUGCUUCUGAGCCUCCCAGUCUUUCAAAACCACAUUAGGGAAUAAGCAGUAUUUGCAUGGUUCCAGUGAUAUCUGGGAGUAAGUGAAAGUAAUGAAAACACAGAAGUAAACACAAAGUAAUUAUAGUUCACCUUUAUACACACGUUAACAGAAAUCAUCUGAUCCCCUUUGCUGCUAAGUGAGUUGAAAAGCGAAAGCGUCUGAAUCCCACCAGCAUCGCUGGAUGUGUCAUCCACUGAGCCUUCAUCUCCCAUGAm6ACUUGm6ACUUUUAACCAAUUUGCUAGAAUUCUACAGAUUUAAAAAAAACAAAAAACAAAAAAAACACUUGAAGAAUCUAAUUCUAUAUUUGAAUUAUAAAGACUUUCAGGAAAAGAAGAAAGAAAAAUAUCACACAGACCUAGGUCCACAAAUACCACAUCUUACUAUGAAGCUGAUCUGCACAAAACAGGCUGUUGUUUUAAAAUGGAGCAACGAUCU
Sequence (MODOMICS CODE ENCODING)	AGAGGCUUGCGUCCCGGGAGCCCGGCCUCGUGCGCCGCGCUUUGAGGACUUCCUAAAGCCAGUCCAGGAGCACAGUUUUUACCUGUUCAGUGGCACAUAUCUGUGAUUGAAACUCUGUUUUUGCAUCUUUAACCACUGAAGGAAGAAUGCAGCAGACUGCUCGACAAACACUGCGCCAAGAGCUCCUCAGCAGAAGCUCCUCGCAUCAGAUCCUCUGUGCUGGGAAUCCUCCCCUCUUGAGCACACUCUGUGCUCCUCUUCCAGUUACGGUGCAUGUGAAGCAAUGGUAUGGGAAAAUUGUUUGCAGAAGGAUGAAAAGGCUUUAUUGCCAAACUCUUAAGGUAUUUUGUUAAUAAAAUCAUUUUCAUAAUGGAAAAGACUCAGAAAAUUCCCCUCGCAUGACAUAUAACAUCCAACAAGGGGCUGAACCAAGAAAAAAUACUGCAGCUGCUGCUAAUGGCAACACUGAGCAAGCACCUGGCCUGUGCCAGGCACUGUCCUGUGCAGUCUGUGUUUGCACUCAUUUUAUCCUCAAGAGCCAGAUGAGCAUCUCCACCAGACAGCACCUGCAGAGGCUUGGGCAGUUUAUUUUACCGUCUCUGAGUAAAAUAGGGAUAAUAAGUAACAGUACCCAUACACAGGUGGCAGAGACGCUAGGGAACUUGCCCAAGGUCACAGAGCUUCCAAGUGGAGGAGCAGGGACACAUAUGCUCACAAUGAUGGCACUAAGGCACAUGUUGCCUGGAUGGAGACCAGCCCACAGAUGAGAGUUCCAGGACAGAGGGAACAUGGAUGGAUCAAGUGAAGUGACAGAACAUUUGGAAAACUCUACCGAGAUAUAUACGGCCCCCCAGUAAAAUUAAAGAGAUAAAGAGAACUACAUUAAGUGAGACAAUAAGGCAACUCUAUUUCUUGCAGGAAAAAAAUAAUUGUGGUUAUAGAACACUACUGGUUCUGAGGUGAAUAGCAGUCACAGAGCCAUCAAAAUAUGACCCCACUCACUGAAGUAAUACAAAGUGCUAGUGUAGCUAUCCCGGGAAGACGUGGAAGGCCGAGCAAGGACCAUGGCACAAGAGGCCACGCUGUACCUAGUAUGGUAUGCAGUGGCCAAGAGGACCCCCCUGAUUCCACCUAGUGUUCAUGCCCACGUGUGAUCUCCUGCCCCGUGAGCUGGGCCUAGCCACUCACUUCUGACAGACAGAAGCCAACAAAAGCAACAGGAUGUCACUUCUAAGUUUAGGUUAUAAACACACUCAGACUUCCAUCUAGGCUCACCUCUUGCUCACUCUGAUGAAAGCCAGCUGCCAUGCUGUCAGCUGGGGAGAGGCCCAUGUGGCAGGA2000000006ACUGAGGAAGUCUUUGGCCACAGCCUGCAAGGAAGUGAAUCCUGACACAAGCUCACUAGAGUGAGCUGGGAAGUAGAUACCCUUCAGUCAAGCUUUCAGAUGAGGCCACAAUCCUAGCCAACAUUUUCAUUUCCACCCAUGAGAAACCUUGAGCCAGAAGACCCAAGCUAAGCUACACCUGGAUUCCUGACCCACAGAUACCAUGAUAACAGACAUUAUUUUAAGCUGCUAUGUUAGGAGUAAUUAGUUAUUUAGGAAUAAGGUAACUAAUACAUUUAUAUUAAUGGGAAGUCAGCAGAGAACAUUUAAAUGGAUAAACUGAGAAAUGGCUGUGUAAGUGUGUGAUCUGGAAACAGGAGAAAAAUGCAGCCCUGAAGAAAGGAGUUAAGAGAGGAAGGAGGAGCUACUAUGUCUCAUUUUAAAUCACGUGGGUGGCAUUAUUUGACUUCUUUUUAAGUACACGGAAGUGUUACUUUCUUAAAUGAAAAUGAAGGUAACAGCAGCAGUAAACUAAUUUCCAGUAGAUGAAAUGUGACUUUGUAAUCCCAGGAAAAGGGAAGAAUUUGCACCAAGAAGUUACUGUUACCUCAGAAUGGCAAGAGCAUGGAUGGCUCUUAUCAUCAUCUUUAUACUUCUUUUACAUUUCCUCAUUUUUUAAAAGUUUUGUGUACAUAUUACAUUUAGGAAAUCCAAUAUAUAGUAUUAAAACAGAAAAAGUAAAGAAGCAGGCUGGGCUUGGUGCCCACUACUCAAUUUG2000000006ACUGGCUUAAAAAAAUUUUUUAAACGACAUGUACGG2000000006ACAGACAUAAUACUUGCUUCUGAGCCUCCCAGUCUUUCAAAACCACAUUAGGGAAUAAGCAGUAUUUGCAUGGUUCCAGUGAUAUCUGGGAGUAAGUGAAAGUAAUGAAAACACAGAAGUAAACACAAAGUAAUUAUAGUUCACCUUUAUACACACGUUAACAGAAAUCAUCUGAUCCCCUUUGCUGCUAAGUGAGUUGAAAAGCGAAAGCGUCUGAAUCCCACCAGCAUCGCUGGAUGUGUCAUCCACUGAGCCUUCAUCUCCCAUGA2000000006ACUUG2000000006ACUUUUAACCAAUUUGCUAGAAUUCUACAGAUUUAAAAAAAACAAAAAACAAAAAAAACACUUGAAGAAUCUAAUUCUAUAUUUGAAUUAUAAAGACUUUCAGGAAAAGAAGAAAGAAAAAUAUCACACAGACCUAGGUCCACAAAUACCACAUCUUACUAUGAAGCUGAUCUGCACAAAACAGGCUGUUGUUUUAAAAUGGAGCAACGAUCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1342	2099	2135	2404	2409
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	21:46250592:+	21:46251349:+	21:46251385:+	21:46251654:+	21:46251659:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9