Modomics - A Database of RNA Modifications
 ID Type Subtype Feature Organism Sequence
 88 rRNA  25S  LSU-L  Saccharomyces cerevisiae  GUUU--GACCUCAAAUCAGGUAGGAGUACCCGCUGAACUUAAGCAUAUCAAU-AAGCGGAGGAAAAGAAACCAACCGGGAUUGCCUUAGU-AACGGCGAGUGAAG----CGGC-A-AAAGCUC----A-AAUUUGAAAUCUGGUACC-UUCGG-----------------------------UGCCC---GA-GU---UGUAAUUUGGAGA-GGGCA--A-CUUU--------------------------------------------GGGGCC-GU------UCCUUGUC-UAUGU-UC-CUUGGAACAGGA----C-------------------GUCAUAGA-GGGUGAGAAU---------------------------------------CCCGUGU-------GGCGA-GGAG---------UGC--GGUUC-UUUGU--AAAG------UGCC-UUCGAA-----GAGUCGAGUUGUUUGG-GAAUGCAGCUCUAAG-U-GGGUG---GUAAAUUCCAUCUAAAGCUAAAUAUUGGCGAG-AGACCGAUAGCGAACAAGUACAGUGAUGGAAAGAUGAAA-AGAACUUUGAAAAGAG-AGUGAAA-AAGUACGUGAAAUUGUUGAAAGG--GAAGGGCAUU-UGAUCA---GACAU--GGUGUUUUG-UGC--CCU---CUGCUC--CUUG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UGGGUAGGGGAAUCUCGCAUUU-CACU---GGGC-CAGCAUCAGUUUUGG-UGGCAGGAUAAAUCCAUAGGAAUGUAG----------------------------------------------------------------------------CUUGCCUCGGUAAGUAUUAUAGCCUGUGGG-AAUACUGCCAG------CUGGG-----ACUGAGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUGCGACGUAAGUCAAG----------------GAUG-CUGGCAUAA---UG-GU---UAUAUGCCGCCCGUCUUGѢAACʍBGGACCAAGGAGUBUA-ACGUCUAUGCGAGUGUUUGGGUG---UAA-------------------------------------AACCCA---UACGCGUAAUGAAAGUGAA-----------------------------------------------------------------------------------------------CGUAGGUUGGGGCC-UCGCAAG-------------------------------------------------------AGGUGCACAAUCGACC-GA-UCC---UGAUG---UCUU------------------------------------------------------------------------------------------------------------------CGGAU--GGAPUUGAGU--AAGAGCAUAGCUGUUGGGACCC#AʍAGAUGGUGAʍCUAUGCCUGAAUAGGGUGAAGCCAGAGGAAACUCUGGUGGAGGCUCGUA#CGGUUCUGʍCGUGCAAAUCG-AUCGUCGAAUJUGGGUAUAG#GGCGAAAG-ACU-AAUCGAACCAUCUAGUAGC-UGGUUCCUGCCGAAGUUUCCCPCAGGAPAGCAGAAGCU-------CGUA----------------------UCAGUPUUAPGAGGUAAAGCGAAPGAUUAGAGGUUCCGGGG-UCGA--AAUGA-CCUUGACCUAUPCUCAAACUUPAAAPAUGUAA-GA-A-GUC-C-UU-GUU--ACUU---AAUUG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGU-G-GACAUU-UGAAUGAAG------AGCUUPUAGUGGGCC-A-UUUPUGGUAAGCʍGAACUGGCGAUGCGGGAUGAACCGAACGUAGAGUUAAGGUGCCGGAAUA--CACGCUCAU-C--AGACACCACAAAAGGUGUUAGUUCAUCUAGACAGCCGGACGGUGGCCAUG-GAAGUCGGAAUCCGCUAAGGAGUGUGUAACA---ACUCACCGGC-CGAAUGAACUA-GCCCUGAAAAUGGAUG-GCGCU-CA-AGCGUG-----UU-ACCUAUACUCUACCGUCAG--GGU-UGAUAUGAU--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCUGA-CGAGUAGGC-------AG-G--CGUGGAGGUC-AG-U----------GACG-AAGCC---UAGACC-GUAAGGUCGGGUCGA---AC-GG-CCUCUAGUGCAGAUBUUGGU-GGUAGUAʍ#CAAAUAUUCAAA-UGAG-------A-ACUUUGAAGACUGA-AGUGGGGAAAGGUUCCACG--UCAACAGCAGUUGGACGUGGGUUAGUCGAUCCUAAGAG-AUG-GG-GAAG-CUC-C--GUUUCA--AAG---GCCUGAUUUUAU---------------------------------------------------------------------------------------------------------------------------------GCAGGC------CACCAUCGAAAGGGAAUCCGGUUAAGAUU-CCGGAACCUGG-------------------------------------AUAUGGAU-------UCU--UCACGGUAA-------------------------------------------------CGUA---AC-UGAAUGUGGAGACGUCG-GCGCGAGCCCUGGG-AGGAGUUAUCUUUUCUUCUUAA-CAG-CU------UAUC-------AC---CCCGGAAUUGGU-UUAUCCGGAGA--UGG-G---GU-CUUAU------------G-G-CUGGAAGAGGCCAGCA----CCUU-------------------------------------------------------------------------------UGCUG-GCUCCG-G-UGCGCUUG-UGA-CGGCCCGUGAAAAUCCACAGGAAGGAAUAG--------------------------------------------------------------------------------------------------------------------------------------------UU---UUCAUG---------CCAGGUCGUACUGAUAACCGCAGCAGGU-CUCCAAGGU-GAACAGCCUCUAGU-UGA-UA-GA-AUAAJGUAGAUA-AGGGAAGUCGGCAAAAUAGAUCC-GUAAC--UUCG---GGAUAAGGAUUGGCUCUAAGGGUCGGGUA-G--U-GAGGGCCU--UGG-UCAGACGCAGC-----GGG-C-GUG-C-UUGU-GGACUGCUU-GGUGGGGCUUG------------------------------------------------------------------------CUCUGCUA-GGCGGAC-UAC--UUG---CGUGCCUU--GUUGUAGA--CGGCCUUGGUAG--GUCUCUUGU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCG--UCGCUUGCUAC-AAU--UAA---CG-AUCAACUUAGAACUGGU-ACGGACAAGGGGAAUCPGACPGUCU-AAUUѢAAACAUAGCAUUGCG-A-UGGUCAGAAAGUGAUG--U-UGACGCAAUGUGAUUPCUGCCBAGUGCUCUGAAUGUCAAAGUGAAʍGAAA--UUCAACCAA--GCGCGGGUAAACGGCGGGAGUAʍCPAPGACPCPCUUAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGUA---GC?AʍʍUGCCUC#U-CAUCUAAUUAGUGACGCGCAUGAAPGGAUUAACGAGAUUCCCACUGUBCCPAUCUACJAPCPAGCGAAACCACAGCCAAGGGA-----ACGGGCUUGGCAGAAUCA-GCG-GGG-AAAGAAGACCCUGUUGAGCPJ-GACJCUAGUUUGACA---UUGUGAAGAGACAUAGAGGGUGUAGAAUAAGUGG---GA--GC-UUCG---------------------------------------------------------------------------------------------------GCGCCAGUGAAAUACCACUACCUUUAUAGUUUCUUU-ACUUA-UUCAA-UGAAGCGGA-GC-UG-GAAU-UCA--------------------------------------------------UUUUCCACGUUCUAGC-AUU--CAAGGUC---CCAUUCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-GCUGA-UCCGGG----UUGAA-GACAUUGUCAGGUGGGGAGUUUGGCUG#GGCGGCACAUCUGUΔAAACGʍUAACGCAGAUGUCCUAAGGGGGGC-UCAUGGAG-AACAGAAA-UCUCCAGUAGAACA--AAAGGGUAAAAGCCCCCUUGAUUUUGAUUUJUCAGJGUGAAPACAA---ACCAUGAAAGUGUGGCCUAUCGAUCCUUUAGU--------CCCUCGGAAUU-U--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGCUA#AG#GUGCCAGAA-AAGUUACCACAG#GAUAACUGGCPUGUGGCAGUCAAGCGUΔCAUAGCGACAUUGCUUUUUGAPUCUU?GAUGUCGGCPCUUCCUAUCAUAC-CGAAGCAGAAUUCGGUAAGCGUUGGAUJ#PUC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCACUAAU-AGGGAACGPGʍGBUGGGUUUAGABCGUCGUGAGACAGGUPAGUUUUACCCUACUGAUGA---------------------------------AUGUUACCGCAAUAGUAAUUGAACUUAGUACGAGA--GGAAC--AGUUCAUUCGGAUAAUUGGUUUUUGCGGCUGUCUGAUC--AGGCAUUGCCGCGAAG--CUA-CCAUCCGC----UGGAU---UAUGGCUGAACGCCUCU-AAGUCAGAAUCCAUGCUAGA--AC---------GCGGUGAUU--------UCUUUGCUCC-ACACAAUAUAGAUGGAUACGAAUAAGGCGUCCUU-------GUGGCGUCGCUGAACCAUAGCAGGCUA--GCAACGGUGCACUUGG-CGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGCCUUGGGUGCUUGCUGGCGAAUUGCAAUGUCAUUUU---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGUGGGG--AUAAA----UCA-UUUGUAUACGA--CUU-A----GAUG---U----ACAACGGGGUAUUGUAAGCAGU-AGAGUAGCCU------UGUU---------------------------------GUUACGAUCUGC---UGAGAUUAAG-CCUU--UGUUGUC-U-GAUUUGU-
 160 rRNA  28S  LSU-L  Homo sapiens  -CGC--GACCUCAGAUCAGACGUGGCGACCCGCUGAAUUUAAGCAUAUUAGU-CAGCGGAGGAAAAGAAACUAACCAGGAUUCCCUCAGU-AACGGCGAGUGAAC----AGGG-A-AGAGCCC----AGCGCCGAAUCCCCGCCCCG-CG--------------------------------GGGCG--CGG-GAC-AUGUGGCGUACGGA--AGAC--------CCGCUCC------------------------------CCGGCGC-CGCUC-GU------GGGGGGCC-CAAGU-CC-UUCUGAUCGAGG----CCC---------------AGCCCGUGGA-CGGUGUGAGG---------------------------------------CCGGUAG------CGGCC-----G----------GC--GCGCG-CCCGG------------GUCU--UCCCG-----GAGUCGGGUUGCUUGG-GAAUGCAGCCCAAAG-C-GGGUG---GUAAACUCCAUCUAAGGCUAAAUACCGGCACG-AGACCGAUAGUCAACAAGUACCGUAAGGGAAAGUUGAAA-AGAACUUUGAAGAGAG-AGUUCAA-GAGGGCGUGAAACCGUUAAGAGG--UAAACGGGUG-GGGUCC---GCGCA--GUCCGCCCG-GAGGAUUCAACCCGGCG--GCGGGUCCGGCCGUGUCGGCGGCCCGGCGGAUCUUUCCCGCCCCCCGUUCCUCCCGACCCCUCCACCCGCCCU---------------------------------------------------------------------------------------------CCCUUCCCCCGCCGCCCCUCCUCCUCCUCCCCGGAGGGGGCGGGCUCCGGCGGGUGCGGGGGUGGGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGGGCCGGGGGUGGGGUCGGCGGGGGACCGUCCCCCGGACCGGCGACCGGCCGCCGCCGGGCGCAUUUCCAGGCGGUGCGCCGCGACCGGCUCCGGGACGGCUGGGAAGGCCCGGCGGGGAAGGUGGCUCGGGGGGCCCCGUCCGUCCGUCCGUCCUCCUCCUCCCCCGUCUCCGCCCCCCGGCCCCGCGUCCUCCCUCGGGAGGGCGCGCGGGUCGGGGCGGCGGCGGCGGCGGCGGUGGCGGCGGCGGCGGGGGCGGCGGGACCGAAACCCCCCCCGAGUGUUACAGCCCCCCCGGCAGCAGCACUCGCCGAAUCCCGGGGCCGAGGGAGCGAGACCCGUCGCCGCGCUCUCCCCCCUCCCGGCGCCCACCCCCGCGGGAAUCCCCGCGAGGGGGGUCUCCCCCGGCGCGGCGCCGGCGUCUCCUCGUGGGGGGGCCGGGCCACCCCUCCCACGGCGCGACCGCUCUCCCACCCCUCCUCCCCGCGCCCCCGCCCCGGCGACGGGGGGGGUGCCGCGCGCGGGUCGGGGGGCGGGGCGGACUGUCCCCAGUGCGCCCCGGGCGGGUCGCGCCGUCGGGCCCGGGGGAGGUUCUCUCGGGGCCACGCGCGCGUCCCCCGAAGAGGGGGACGGCGGA----------------GCGAGCGCACGGGGUCGGCG-GCGACGUCG---GC-UA---CCCACCCGACCC#UCUUGѢAACʍCGGACCAAGGAGUBUA-ACACGUGCGCGAGUCGGGGGCUCGC---AC----------------------------------GAAAGCCGC-CGUGGCGCAAUGAAGGUGAAGGCCGGCGC-----------------------------------------------------------------------------GCUCGCCGGCCGAGGUGGGAUCC-CGAGGCCUCUCCAG-----------------------------------------UCCGCCGAGGGGCACCACCGGCC-CG-UCU---CGCCC--G-CCGC---------------------------------------------------------------------------------------------------------------GCCGGGG--AGG-UGGAGC--ACGAGCGCACGUGUUAGGACCC#AʍAGAUGGUGAʍCPAUGCCUGGGCAGGGCGAAGCCAGAGGAAACUCUGGUGGAGGUCCGPAGCGGUCCUGACGUGCAAAUCG-GUCGUCCGACCUGGGUAUAG#GGCGAAAG-ACU-AAUCGAACCAUCUAGUAGC-UGGUUCCCUCCGAAGUUUCCCPCAGGAPAGCUGGCGCU--C----UCGCAGACCCGACGCACCCCCGCCACGCAGUUUUAUCCGGUAAAGCGAAPGAUUAGAGGUCUUGGGG-CCGA--AACGA-UCUCAACCPAUPCUCAAACUUPAAAUGGGUAA-GA-A-GCC-C-GG-CUC--GCUG---GCGUG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCC-G-GGGU-G--GAAU-GCG------AGUGCCUAGUGGGCC-A-CPUPUGGUAAGCʍGAACUGGCGCUGCGGGAUGAACCGAACGCCGGGUUAAGGCGCCCGAUGC-CGACGCUCAU-C--AGACCCCAGAAAAGGUGUUGGUUGAUAUAGACAGCAGGACGGUGGCCAUG-GAAGUCGGAAUCCGCUAAGGAGUGUGUAACA---ACUCACCUGC-CGAAUCAACUA-GCCCUGAAAAUGGAUG-GCGCU-GG-AGCGUC-----GG-GCCCAUACCCGGCCGUCGC-CGGC-AGUC-----GAGAGUGGACGGGAGCGGCGGGGGCGGCGGCGCGCGCGCGCGUGUGGUGUGCGUCGGAGGGCGGCGGCGGCGGCGGCGGCGGGGGUGUGGGGUCCUUCCCCCGCCCCCCCCCCCACGCCUCCUCCCCUCCUCCCGCCCACGCCCCGCUCCCCGCCCCCGGAGCCCCGCGGAGCUAC------------------------------------------GCCGCGA-CGAGUAGGA-------GG-G-CCGBUGCGGUG-AG-C----------CUUG-AAGCC---UAGGGC-GCGGGCCCGGGUGGA--GGC-CG-CCGCAGGUGCAGAUBUUGGU-GGUAGUʍ-#BAAAUAUUCAAA-CGAG-------A-ACUUUGAAGGCCGA-AGUGGʍGAAGGGUUCCAUG--JGAACAGBA#UUGAACAUGGGUCAGUCGGUCCUGAGAG-AUG-GG-CGAG-CGC-C--GUUCCG--AAG---GGACGGGCGAUGGCCUC-----------------------------------------------------------------------------------------------------------------------CGUUGCCCUCG------GCCGAPCGAAAGGGAGUCGGGUUCAGAUC-CCCGAAUCCGGAGUGGCGGA------------------GAUGGGCGCCGCGAGGCG-------UCCA-GUGCGGUAA-------------------------------------------------CGCG---AC-CGAUCCCGGAGAAGCCG-GCGGGAGCCCCGGG-GAGAGUUCUCUUUUCUUUGUGA-AGG-GC------AGGG------CGC---CCUGGAAUGGGU-UCGCCCCGAGA--GAG-G---GG-CCCGU------------G-C-CUUGGAAAGCGUCGCG----GUUCC------------------------------------------------------------------------------GGCGG-CGUCCG-G-UGAGCUCU-CGC-UGGCCCUUGAAAAUCCGGGGGAGAGGGUGU--------------------------------------------------------------------------------------------------------------------------------------------AA---AUCUCGC-------GCCGGGCCGUACCCAUAUCCGCAGCAGGU-CUBCAAGGU-GAACʍGCCUCUGGBAUGU-UG-GA-ACAAJGUAGGUA-AGGGAAGUCGGCAAGCBGGAUCC-GUAAC--UUC#---GGAUAAGGAUUGGCUCUAAGGGCUGGGUC-G--G-UCGG-GCU--GGG-GCGCGAAGCGG-----G-------------GC-UGGGCGCGC-GCCGCGGCUGG------------------------------------------------------------------------ACGAGGCG-CGCGCCC-----------------------CCCCCAC---GCCCGGGGCAC--CCCCCUCGCGGCCCUCCCCCGCCCCACCCGCGCGCGCCGCUCGCUCCCUCCCCACCCCGCGCCCUCUCUCUCUCUCUCUCCCCCGCUCCCCGUCCUCCCCCCUCCCCGGGGGAGCGCCGCGUGGGGGCGCGGCGGGGGGAGAAGGGUCGGGGCGGCAGGGGCCGCGCGGCGGCCGCCGGGGCGGCCGGCGGGGGCAGGUCCCCGCGAGGGGGGCCCCGGGGACCCGGGGGGCCGGCGGCGGCGCGGACUCUGGACGCGAGCCGGGCCCUUCCCGUGGAUCGCCCCAGCUGCGGCGGGCGUCGCGGCCGCCCCCGGGGAGCCCGGCGGCGGCGCGGCGCGCCCCCCACCCCCACCCCACGUCUCGGUCGCGCGCGCGUCCGCUGGGGGCGGGAGCGGUCGGGCGGCGGCGGUCGGCGGGCGGCGGGGCGGGGCGGUUCGUCCCCCCGCCCUACCCCCCCGGCCCCGUCCGCCCCCCGUUCCCCCCUCCUCCUCGGCGCGCGGCGGCGGCGGCGGCAGGCGGCGGAGGGGCCGCGGGCCGGUCCCCCCCGCCGGGUCCGCCCCCGGGGCCGCGGUUCCGCGCGCGCCUCG--CCUCGGCCGGC-GCC--UAG---CA-GCCGACUUAGAACUGGU-GCGGACCAGGGGAAUCCGACPGPUU-AAUUAAAACAAAGCAUCGCG-A-AGGCCCGCGGCGGGUG--U-UGACGCGAUGUGAUUPCUGCCBAGUGCUCUGAAUGPCAʍAGUGAʍ-GAAA--UPCAAPGAA--GCGCGG#UAAACGGCGGGAGPAʍCPAPGACPCPCUUAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGUA---GC?AAʍUGCCUCGU-CAUCUAAUUAGUGABGCGCAUGAAZGGAPGAʍCGAGʍUUCCCACUGUBCCPACCUACPAPCCAGCGAAACCACʍGBCAAGGGA-----ACGGGCUPGGBGGAAUCA-GCG-G#G-AAAGAAGACCCUGUUGAGCPU-GACJCUAGUCUGGCA---CGGUGAA#AGACAUGAGAGGUGPAGAAUAAGUGG---GA--GGCC----CCCGGCGCCCCCCCGGUGUCCCCGCGAGGGGCCCGGGGCGGGGUCCGCGGCCCUGCGGG---------------------------------------CCGCC#GUGAAAUACCABUACUCUGAUCGUUUUUUC-ACUGA-CCCGG-UGAGGCGGGGGGGCG-AGCC-CGAG------------------------------------------------GGGCUCUCGCUUCUGGC-GCC--AAGCGCC---CGCCCGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGG-CGCGA-CCCGCU----CCGGG-GACAGUGCCAGGUGGGGAGUUUGACUG#GGCGGUACACCUGUCAAACGGUAЖCGCAGGJ#UCCUAAGGCGAGC-UCAGGGAG-GACAGAAA-CCUCCCGUGGAGCA--GAAGGGCAAAAGCUCGCUUGAPCUPGAPUU-UCAGJACGAAPACAG---ACCGUGAAAGCGGGGCCUCACGAUCCUUCUGA--------CCUUPUGGGUU-U--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAAGCAGGA#-GUGUCAGAA-AAGUUACCACAG#GAUAACUGGCPUGUGGCGGCCAAGCGUPCAUAGCGACGPCGCUUUUUGAP?CUUCGAUGUCGGBPCUUCCUAUCAUUG-PGAAGCAGAAUUCGCCAAGCGUU#GAUJ#PUC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCACUAAU-AGGGAACGPGʍGCUGGGΔPUAGABCGUCGUGAGACAGGUPAGUUUUACCCUACUGAPGʍU--------------------------------GUGPUGPUGCCAUGGUAʍUCCUGCUCAGUACGAGA--GGAAC--CGCAG#UJCA#ACAUPUGGUGUAP#UGCUUGGCUGAGG--AGCCAAUGGGGCGAAG--CUA-CCAPCUGU----GGGAU---UAUGACPGAACGCCUCU-AAGUCAGAAUCCCGCCCAGG-------------CGAACGAU-----------ACGGCAGC-GCCGCGGAGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCGGUUGGCCUCGGAUAGCCGGUCCCCCGCCUGUCCCCGCCGGCGGGCCGCCCCCCCCUCCACGCGCCCCGCCGCGGGAGGGCGCGUGCCCCGCCGCGCGCCGGGACCGGGGUCCGGUGCGGAGUGCCCUUCGUCCUGGGAAACGGGGCGCGGCCGGAAAGGCGGCCGCCCCCUCGCCCGUCACGCACCGCACGUUCGUGGGGAACCUGGCG-----CUAAA----CCA-PPCGUAGACGA--CCU-G----CUUC---U----GGGUCGGGGPUUCGUACGPAGC-AGAGCAGCUC------CCUC---------------------------------GCUGCGAUCUAU---UGAAAGUCAG-CCCU--CGACACA-AGGGUUUGUC
 229 rRNA  25S  LSU-L  Arabidopsis thaliana  ---AGCGACCCCAGGUCAGGCGGGAUUACCCGCUGAGUUUAAGCAUAUCAAU-AAGCGGAGGAAAAGAAACUAACAAGGAUUCCCUUAGU-AACGGCGAGCGAAC----CGGG-A-AGAGCCC----A-GCUUGAAAAUCGGACGUC-UUCGG-----------------------------CGUUC---GA-AU---UGUAGUCUGGAGA--AGCG--U-CCUC--------------------------------------------AGCGAC-GG------ACCGGGCC-UAAGU-UC-CCUGGAAAGGGG----C-------------------GCCAGAGA-GGGUGAGAG----------------------------------------CCCGUCG-------UGCCC-GGAC----------CC-UGUCGC-ACCAC--GAGG------CGCU-GUCUAC-----GAGUCGGGUUGUUUGG-GAAUGCAGCCCCAAU-C-GGGCG---GUAAAUUCCGUCCAAGGCUAAAUACGGGCGAG-AGACCGAUAGCGAACAAGUACCGCGAGGUAAAGAUGAAA-AGGACUUUGAAAAGAG-AGUCAAA-GAGUGCUUGAAAUUGUCGGGAGG--GAAGCGGAUG-GGGGCC---GGCGA--UGCGUCCUG-GUCGGAUGCGGAACGGA--GCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCCGGUCCGCCGAUCGAUUCGG-GGCG---UGGA-CCGACGCGGAUUACG-GUGGCGGCCUAAGCCCGGGCUUUUGAU----------------------------------------------------------------------------ACGCUUGUGGAGACGUCGCUGC---CGUGAUCGUGGUCUGCAGCACGCGCCUAACGGCGUGCCUCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAUCAGCGUGCUCCGG----------------GCGU-CGGCCUGUG---GGCUC---CCCAUUCGACCCGUCUUGAAACʍCGGACCAAGGAGUBUG-ACAUGUGUGCGAGUCAACGGGUG--AGUA-------------------------------------AACCCG--UAAGGCGCAAGGAAGCUGA--------------------------------------------------------------------------------------------------UUGGCGGGAUCC----UCGC-------------------------------------------------------GGGUGCACCGCCGACC-GA-CCU---UGAUC---UUCU------------------------------------------------------------------------------------------------------------------GAGAA--GGGPJCGAGU--GUGAGCAUGCCUGUCGGGACCC#AʍAGAUGGUGAʍCPAUGCCUGAGCGGGGUAAAGCCAGAGGAAACUCUGGUGGAAGCCCGCAGCGAUACUGʍCGUGCAAAUCG-UUCGUCUGACUUGGGUAUAG#GGCGAAAG-ACU-AAUCGAACCAUCUAGUAGC-UGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGAGCU-CG----GACG----------------------CGAGUUCUAPCGGGUAAAGCCAAPGAUUAGAGGCAUUGGGG-GCGC--AACG--CCUCGACCUAUUCUCAAACUUUAAAUAGGUAG-GA-C-GUG-U-CG-GCU--GCUU---UGUUG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCG-U-CACACG--GAAUCGAG------AGCUCCAAGUGGGCC-A-UUUUUGGUAAGCʍGAACUGGCGAUGCGGGAUGAACCGGAAGCCGGGUUACGGUGCCCAACUG--CGCGCUAAC-C-UAGAACCCACAAAGGGUGUUGGUCGAUUAAGACAGCAGGACGGUGGUCAUG-GAAGUCGAAʍUCCGCUAAGGAGUGJGUAACA---ACUCACCUGC-CGAAUCAACUA-GCCCCGAAAAUGGAUG-GCGCU-UA-AGCG-------CG-ACCUAUACCCGGCCGUCGG--GGC-AAGAGCCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCUCGA-UGAGUAGGA-------GG-G--CGCGGCGGUC--G-C----------UGCA-AAACC---UAGGGC-GCGAGGC---GCGGA---GC-GG-CCGUCGGUGCAGAUBUUGGU-GGUAGUʍ-#CAAAUAUUCAAA-UGAG-------A-ACUUUGAAGGCCGA-AGAGGGGAAAGGUUCCAUG--UGAACGGBACUUGCACAUGGGUUAGUCGAUCCUAAGAG-UCG-GG-GGAA-ACC-C--GUCUGA--UAG---CGCU-----UA------------------------------------------------------------------------------------------------------------------------------------AGCG------A-ACUUCGAAAGGGGAUCCGGUUAAAAUU-CCGGAACCGGG-------------------------------------ACGUGGCG-------GUU---GACGGCAA-------------------------------------------------CGUJ---AG-GGAGUCCGGAGACGUCG-GCGGGGGCCUCGGG-AAGAGUUAUCUUUUCUGUUUAA-CAG-CC------UGCC------CAC---CCUGGAAACGGC-UCAGCCGGAGG--UAG-G---GU-CCAGC------------G-G-CUGGAAGAGCACCGCA----CGUCG------------------------------------------------------------------------------CGUGG-UGUCCG-G-UGCGCCCC-CGG-GCGCCCUUGAAAAUCCGGAGGACCGAGUGC--------------------------------------------------------------------------------------------------------------------------------------------CG---CUCACG---------CCCGGUCGUACUCAUAACCGBAUCA#GU-CUBCAAGGU-GAACʍGCCUCUGGU-CGA-UG-GA-ACAAJGUAGGCA-AGGGAAGUCGGCAAAAUGGAUCC-GUAAC--JUCG---GGAAAAGGAUUGGCUCUGAGGGCUGGGCU-C--G-GGGG-UCC--CAG-UUCCGAACCCG-----UCG-G-CUG-U-CAGC-GGACUGCUC-GAGCUGCUUCC------------------------------------------------------------------------GCGGCGAG-AGCGGGU-CGC--CGG---CUGCCGGC--CGGGGGAC---GACUGGGAACG--GCUCUCUCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGC--UUUCCCCGGGC-GUC--GAA---CA-GUCAGCUCAGAACUGGU-ACGGACAAGG#GʍAUCCGACUGPUU-AAUUAAAACAAAGCAUUGCG-A-UGGUCCCUGC-GGAUG--C-UAACGCAAUGUGAUUUCUGCCCAGUGCUCUGAAUGPCAAAGUGAA-GAAA--UUCAACCAA--GCGCGGGUAAACGGCGGGAGPAACPAPGACUCUCUUAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGUA---GCCAAʍUGCCUC#U-CAUCUAAUUAGUGACGCGCAUGAAPGGAUUAʍCGAGʍUUCCCACUGUBCCUGUCUACUAPCCAGCGAAACCACAGBCAAGGGA-----ACGGGCUUGGCAGAAUCA-GCG-GGG-AAAGAAGACCCUGJUGA#CUU-GACJCUAGUCCGACU---UUGUGAAAUGACUUGAGAGGUGUAGGAUAAGUGG---GA--GC-UUCG---------------------------------------------------------------------------------------------------GCGCAAGUGAAAUACCACUACUUUUAACGUUAUUUU-ACUUA-CUCCG-UGAAUCGGA-GGCCG-GGGU-ACA--------------------------------------------------ACCCC-UGUUUUUGGU-CCC--AAGGCUC--GCUUCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-GUCGA-UCCGGG----CGGAG-GACAUUGUCAGGUGGGGAGUUUGGCUG#GGCGGCACAUCUGUUAAAAGʍUAACGCAGGJ#UCCUAAGAUGAGC-UCAACGAG-AACAGAAA-UCUCGUGUGGAACA--AAAGGGUAAAAGCUCGUUUGAPUCUGAUUU-UCAGUACGAAUACGA---ACCGUGAAAGCGUGGCCUAUCGAUCCUUUAGA---------CUUCGGAAUU-P--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGCUA#A#-GUGUCAGAA-AAGUUACCACAG#GAUAACUGGCPUGUGGCAGCBAAGCGUUCAUAGCGACGUUGBUUUUUGAUBCUUCGAUGUCGGBPCUJCCUAUCAUUG-UGAAGCAGAAUUCACCAAGUGUU#GAUUGPUC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCACCAAU-AGGGAACGUGʍGBUGG#JUUAGABCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGC----------------------------------CCGCGUCGCGAUAGUAAUUCAACCUAGUACGAGA--GGAAC--CGUUGAUUCGCACAAUUGGUCAUCGCGCUUGGUUGAAA--AGCCAGUGGCGCGAAG--CUA-CCGUGCGC----UGGAU---UAUGACUGAACGCCUCU-AAGUCAGAAUCCGGGCUAG---AA---------GCGACGCA-----------UGCGCCCG-CCGCCCGAUUGCCGACCCUCAGUAGGAGCUUAGG-------CUCCAAAGGCACGUGUCGUUGGCUAAG------UCCGUUCGGCGG-AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGUCGUUCGGACCGCCUUGAAUUAUAAUUACCACCGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCGGG--UAGAA----UCC-UUUGCAGACGA--CUU-A----AAUA---C----GCGACGGGGUAUUGUAAGUGGC-AGAGUGGCCU------UGCU---------------------------------GCCACGAUCCAC---UGAGAUUCAG-CCCU-UUGUCGCU-AAGAUUCGA-

  • DOMAIN-0
  • DOMAIN-I
  • DOMAIN-II
  • DOMAIN-III
  • DOMAIN-IV
  • DOMAIN-V
  • DOMAIN-VI

In our latest update, we've incorporated new functionalities in the user interface to enhance data accessibility. Now, users have the option to download aligned sequences in FASTA format directly. Utilizing the available drop-down menus, you can not only view specific sequences but also filter the ones you wish to download. Check boxes allow you to choose between downloading sequences with or without modifications. Unlike the RNA sequences section, where filters are more dynamic, the alignment interface categorizes sequences based on Rfam families, leaving only the organism filter as a variable drop-down option.