Modomics - A Database of RNA Modifications

ID Card:

Full name: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase
UniProt: Q09357
Structures: | 8GU3 |
Enzyme type:
Position of modification - modification: n:43 - m6A
Level of experimental evidence: 3
Level of experimental reliability: 2


PDB Structures:


8GU3

Structure Description:

Title:
Classification:
Technique:

Abstract of the PDB Structure's related Publication:



Download RCSB-PDB Structures:

Pdb Files   8GU3.pdb  
Pdbx/mmCIF Files   8GU3.cif  


Protein sequence:

MSQNNEMHPRNPYRNKPPDFKALAVEYPEFRKFCQYVSNGKVTFDFKKDAAVRCLTQTLLKKDFNLDVEIPPGHLVPRVPQKLNYCLLIDDLLKANKLTKNVIGIDIGTGTSCIHALIGARQFNWKFIATDGDEKSVRVAHENVAKNGLSSSICVVHVNPDVKTVLMDVVNTIPDTDYAFCMCNPPFFEKGNGDDKFCEDISSSTETYSNRVASEFRTAPHSATFASSAELFVDGGEVAFVNRIIDDSVLLRDRIKIYTTMIGRKSSLKPLQNRLQRFGDDVKIMISVLNQGKTKRWMLAWTFSKSVSLTTIDRPISFQCPKPGLTRLMQEISILNGRLRQEDTLAIVAEFKCVTWTNQRARKRAKAILSESSIKKAKWNFSNVACQVAFGAGDGKDSYTDAGNFVSSESIPTNNLNAWDNASQAYFPLPNGEVPGPIIRIRIQVFSEDSYDSISFELISGSKQHLHQLVQYLKNLICR

Comments:

METT-10 methylates a variant motif UACm6AGAAAC on the 3′ splice site (AG) of SAM synthetase (SAMS) pre-mRNA.




Reaction Substrate SubstrateType Position (Anti)Codon Modified (Anti)Codon Amino Acid Change Transcript Name Transcript Region Cellular Localization References
A:m6A snRNA (sn) snRNA/snRNA/eukaryotic nucleoplasm 43



Publications:

Title Authors Journal Details PubMed Id DOI
Splice site m<sup>6</sup>A methylation prevents binding of U2AF35 to inhibit RNA splicing. Mendel M; Delaney K; Pandey RR; Chen KM; Wenda JM; Vågbø CB; Steiner FA; Homolka D; Pillai RS Cell [details] 33930289 10.1016/j.cell.2021.03.062
Structure of the Caenorhabditis elegans m6A methyltransferase METT10 that regulates SAM homeostasis. Ju J; Aoyama T; Yashiro Y; Yamashita S; Kuroyanagi H; Tomita K Nucleic Acids Res [details] 36794723 10.1093/nar/gkad081