Modomics - A Database of RNA Modifications

ID Card:

Full name: tRNA-specific adenosine deaminase 1
Synonym: hADAT1
GI: 302058269
Orf: ADAT1
UniProt: Q9BUB4
Alpha Fold Predicted Structure: AF-Q9BUB4-F1
Enzyme type: deaminase
Position of modification - modification: t:37 - m1I



Protein sequence:

MWTADEIAQLCYEHYGIRLPKKGKPEPNHEWTLLAAVVKIQSPADKACDTPDKPVQVTKEVVSMGTGTKCIGQSKMRKNGDILNDSHAEVIARRSFQRYLLHQLQLAATLKEDSIFVPGTQKGVWKLRRDLIFVFFSSHTPCGDASIIPMLEFEDQPCCPVFRNWAHNSSVEASSNLEAPGNERKCEDPDSPVTKKMRLEPGTAAREVTNGAAHHQSFGKQKSGPISPGIHSCDLTVEGLATVTRIAPGSAKVIDVYRTGAKCVPGEAGDSGKPGAAFHQVGLLRVKPGRGDRTRSMSCSDKMARWNVLGCQGALLMHLLEEPIYLSAVVIGKCPYSQEAMQRALIGRCQNVSALPKGFGVQELKILQSDLLFEQSRSAVQAKRADSPGRLVPCGAAISWSAVPEQPLDVTANGFPQGTTKKTIGSLQARSQISKVELFRSFQKLLSRIARDKWPHSLRVQKLDTYQEYKEAASSYQEAWSTLRKQVFGSWIRNPPDYHQFK

Comments:

Specifically deaminates adenosine 37 to inosine in exclusively cytoplasmic tRNA-Ala. The anticodon stem-loop of tRNAAla) alone is not a functional substrate for hADAT1.




Reaction Substrate SubstrateType Position (Anti)Codon Modified (Anti)Codon Amino Acid Change Transcript Name Transcript Region Cellular Localization References
A:I tRNA (t) Ala/IGC/unknown 37 IGC IGC tRNAAlaIGC anticodon-loop 10430867   

Alpha Fold Predicted Structure:






Clear Selection and Reset Camera

Protein sequence:

M W T A D E I A Q L C Y E H Y G I R L P K K G K P E P N H E W T L L A A V V K I Q S P A D K A C D T P D K P V Q V T K E V V S M G T G T K C I G Q S K M R K N G D I L N D S H A E V I A R R S F Q R Y L L H Q L Q L A A T L K E D S I F V P G T Q K G V W K L R R D L I F V F F S S H T P C G D A S I I P M L E F E D Q P C C P V F R N W A H N S S V E A S S N L E A P G N E R K C E D P D S P V T K K M R L E P G T A A R E V T N G A A H H Q S F G K Q K S G P I S P G I H S C D L T V E G L A T V T R I A P G S A K V I D V Y R T G A K C V P G E A G D S G K P G A A F H Q V G L L R V K P G R G D R T R S M S C S D K M A R W N V L G C Q G A L L M H L L E E P I Y L S A V V I G K C P Y S Q E A M Q R A L I G R C Q N V S A L P K G F G V Q E L K I L Q S D L L F E Q S R S A V Q A K R A D S P G R L V P C G A A I S W S A V P E Q P L D V T A N G F P Q G T T K K T I G S L Q A R S Q I S K V E L F R S F Q K L L S R I A R D K W P H S L R V Q K L D T Y Q E Y K E A A S S Y Q E A W S T L R K Q V F G S W I R N P P D Y H Q F K

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-Q9BUB4-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-Q9BUB4-F1.cif  
DSSP Secondary Structures   Q9BUB4.dssp  





Publications:

Title Authors Journal Details PubMed Id DOI
Identification and characterization of a human tRNA-specific adenosine deaminase related to the ADAR family of pre-mRNA editing enzymes. Maas S, Gerber AP, Rich A... Proc Natl Acad Sci U S A [details] 10430867 -

Links:

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