Modomics - A Database of RNA Modifications

ID Card:

Full name: Fibrillarin-like rRNA/tRNA 2′-O-methyltransferase
Synonym: aFib, PH0052, Fibrillarin-like
GI: 14590005
COG: COG1889
UniProt: O57811
Structures: | 1G8A |
Alpha Fold Predicted Structure: AF-O57811-F1
Complex: C/D RNP
Enzyme type: methyltransferase
Position of modification - modification: l:many - Xm
s:many - Xm


PDB Structures:


1G8A

Structure Description:

Title:
Classification:
Technique:

Abstract of the PDB Structure's related Publication:



Download RCSB-PDB Structures:

Pdb Files   1G8A.pdb  
Pdbx/mmCIF Files   1G8A.cif  


Protein sequence:

MVEVKKHKFPGVYTVIDDDGSERIATKNLVPGQRVYGERVIKWEGEEYRIWNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEYFEVIERLNLEPYEKDHALFVVRKT

Comments:

Homologue of yeast Nop1 protein and human fibrillarin. A catalytic subunit of C/D RNP complex, which in Archaea is composed of FlpA (fibrillarin), L7Ae and Nop56/58 proteins.




Reaction Substrate SubstrateType Position (Anti)Codon Modified (Anti)Codon Amino Acid Change Transcript Name Transcript Region Cellular Localization References
N:Nm undefined RNA ()   3'end
N:Nm undefined RNA ()   3'end

Alpha Fold Predicted Structure:






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Protein sequence:

M V E V K K H K F P G V Y T V I D D D G S E R I A T K N L V P G Q R V Y G E R V I K W E G E E Y R I W N P N R S K L G A A I M N G L K N F P I K P G K S V L Y L G I A S G T T A S H V S D I V G W E G K I F G I E F S P R V L R E L V P I V E E R R N I V P I L G D A T K P E E Y R A L V P K V D V I F E D V A Q P T Q A K I L I D N A E V Y L K R G G Y G M I A V K S R S I D V T K E P E Q V F R E V E R E L S E Y F E V I E R L N L E P Y E K D H A L F V V R K T

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-O57811-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-O57811-F1.cif  
DSSP Secondary Structures   O57811.dssp  





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