A major problem with the pharmaceutical use of nonviral gene delivery systems arises from their limited characterization due to their size and heterogeneity. In this study, we provide a more intuitive view of their structure and behavior employing an empirically based phase diagram approach. Complexes formed between plasmid DNA and four cationic carriers (a monovalent lipid, the same monovalent lipid combined with a helper lipid, polylysine, and a branched form of polyethyleneimine), at both positive and negative nitrogen/phosphorous ratios, are characterized employing dynamic light scattering, circular dichroism, and extrinsic dye fluorescence as methods sensitive to various aspects of the structure of the complexes. These measurements were performed as a function of pH and ionic strength to perturb the electrostatic contacts that are key to complex formation. Using a multidimensional eigenvalue approach, the data are presented in the form of a colored, five dimensional diagram. The resultant eight empirical phase diagrams display three to five variably resolved phases. In contrast, the phase diagram of the plasmid alone showed only two to three such phases. Each state is assigned to a particular form of the complex in terms of their size, extent of collapse and conformation of the associated DNA component. The utility of this approach is then briefly discussed.