Crystallization and characterization of Smaug: a novel RNA-binding motif
Overview of Green JB et al.
Authors | Green JB  Edwards TA  Trincao J  Escalante CR  Wharton RP  Aggarwal AK   |
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Affiliation | Structural Biology Program   Department of Physiology and Biophysics   Mount Sinai School of Medicine   Box 1677   1425 Madison Avenue   New York   NY 10029   USA.   |
Journal | Biochem Biophys Res Commun |
Year | 2002 |
Abstract
During Drosophila embryogenesis, Smaug protein represses translation of Nanos through an interaction with a specific element in its 3(')UTR. The repression occurs in the bulk cytoplasm of the embryo; Nanos is, however, successfully translated in the specialized cytoplasm of the posterior pole. This generates a gradient of Nanos emanating from the posterior pole that is essential for organizing proper abdominal segmentation. To understand the structural basis of RNA binding and translational control, we have crystallized a domain of Drosophila Smaug that binds RNA. The crystals belong to the space group R3 with unit cell dimensions of a=b=129.3A, c=33.1A, alpha=beta=90 degrees, gamma=120 degrees and diffract to 1.80A with synchrotron radiation. Initial characterization of this domain suggests that it encodes a novel RNA-binding motif.