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Crystallization and characterization of Smaug: a novel RNA-binding motif

Overview of Green JB et al.

AuthorsGreen JB  Edwards TA  Trincao J  Escalante CR  Wharton RP  Aggarwal AK  
AffiliationStructural Biology Program   Department of Physiology and Biophysics   Mount Sinai School of Medicine   Box 1677   1425 Madison Avenue   New York   NY 10029   USA.  
JournalBiochem Biophys Res Commun
Year 2002

Abstract


During Drosophila embryogenesis, Smaug protein represses translation of Nanos through an interaction with a specific element in its 3(')UTR. The repression occurs in the bulk cytoplasm of the embryo; Nanos is, however, successfully translated in the specialized cytoplasm of the posterior pole. This generates a gradient of Nanos emanating from the posterior pole that is essential for organizing proper abdominal segmentation. To understand the structural basis of RNA binding and translational control, we have crystallized a domain of Drosophila Smaug that binds RNA. The crystals belong to the space group R3 with unit cell dimensions of a=b=129.3A, c=33.1A, alpha=beta=90 degrees, gamma=120 degrees and diffract to 1.80A with synchrotron radiation. Initial characterization of this domain suggests that it encodes a novel RNA-binding motif.