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Unprecedented right- and left-handed quadruplex structures formed by heterochiral oligodeoxyribonucleotides

Overview of Virgilio A et al.

AuthorsVirgilio A  Esposito V  Citarella G  Mangoni A  Mayol L  Galeone A  
AffiliationDipartimento di Chimica delle Sostanze Naturali   Università degli Studi di Napoli Federico II   Via D. Montesano 49   Naples   Italy.  
JournalBiochimie
Year 2011

Abstract


CD and NMR studies on heterochiral oligodeoxynucleotides (d/l-ODNs) forming quadruplex structures are reported. Heterochiral ODNs, based on sequence TGGGGT, are able to form stable either right- or left-handed quadruplexes depending on d/l ratio and residues position. Results suggest that the 3'-end and the core of the G-run are more important than the 5'-end in determining the quadruplex handness. Particularly, oligonucleotide T(D)G(D)G(L)G(L)G(D)T(D) (L34) at low temperatures forms a well-defined left-handed quadruplex, notwithstanding it is mostly composed by natural d residues. This structure is characterized by three all-anti G-tetrads and one all-syn G-tetrad.