Modomics - A Database of RNA Modifications

ID Card:

Full name: Trimethylguanosine synthase 1
Synonym: P2573
GI: 74583797
Orf: YPL157W
COG: COG0116
UniProt: Q12052
Alpha Fold Predicted Structure: AF-Q12052-F1
Enzyme type: methyltransferase
Position of modification - modification: n:0 - m2,2,7GpppN
snoRNA:0 - m2,2,7GpppN



Protein sequence:

MGRTFIHASKIKHAARKRKHHSNFRTLIKLLNNDAYKIESSKPLKNGKLFKYWKNRRRLFSKIDSASIYMTDELWFSVTPERIACFLANFVKACMPNAERILDVFCGGGGNTIQFAMQFPYVYGVDYSIEHIYCTAKNAQSYGVDDRIWLKRGSWKKLVSKQKLSKIKYDCVFGSPPWGGPEYLRNDVYDLEQHLKPMGITKMLKSFLKLSPNVIMFLPRNSDLNQLSRATRKVLGPFAKCKVLYVKENGYMKGIFCMWGECFFNYEPASTENSRRESSEKEELSSENEELSKRKKHESTTTTKDNTVDIYDVNG

Comments:

Tgs1p is an evolutionarily conserved protein that carries a signature of S-AdoMet methyltransferase and is essential for hypermethylation of the m(7)G caps of both snRNAs and snoRNAs (Mouaikel et al. 2002 ). The absence of Tgs1 caused changes in telomere length and structure, improved telomeric silencing and stabilized telomeric recombination. Moreover, the yeast snRNA and snoRNA methyltransferase Tgs1 is responsible for TLC1 m3G cap formation (Franke et al. 2008 ).




Reaction Substrate SubstrateType Position (Anti)Codon Modified (Anti)Codon Amino Acid Change Transcript Name Transcript Region Cellular Localization References
m7G:m2,7G RNA snoRNA 1 N - terminus Nucleolus 11983179   
m2,7G:m2,2,7G RNA snoRNA 1 N - terminus Nucleolus 11983179   
m7G:m2,7G RNA snRNA 1 U1, U2, U4 and U5 N - terminus Nucleus 11983179   
m2,7G:m2,2,7G RNA snRNA 1 U1, U2, U4 and U5 N - terminus Nucleus 11983179   

Alpha Fold Predicted Structure:






Clear Selection and Reset Camera

Protein sequence:

M G R T F I H A S K I K H A A R K R K H H S N F R T L I K L L N N D A Y K I E S S K P L K N G K L F K Y W K N R R R L F S K I D S A S I Y M T D E L W F S V T P E R I A C F L A N F V K A C M P N A E R I L D V F C G G G G N T I Q F A M Q F P Y V Y G V D Y S I E H I Y C T A K N A Q S Y G V D D R I W L K R G S W K K L V S K Q K L S K I K Y D C V F G S P P W G G P E Y L R N D V Y D L E Q H L K P M G I T K M L K S F L K L S P N V I M F L P R N S D L N Q L S R A T R K V L G P F A K C K V L Y V K E N G Y M K G I F C M W G E C F F N Y E P A S T E N S R R E S S E K E E L S S E N E E L S K R K K H E S T T T T K D N T V D I Y D V N G

Secondary Structure Alphabet

  • G: 3-turn helix (310helix)
  • H: α-helix
  • I: 𝝅-helix (5 - turn helix)
  • T: Hydrogen Bonded Turn
  • B: β-sheet
  • S: Bend
  • C: Coil (residues not present in any of the above conformations)
  • N: Not assigned

Download PDB Structures & DSSP Secondary Structures:

Alpha Fold Pdb Files   AF-Q12052-F1.pdb  
Alpha Fold Pdbx/mmCIF Files   AF-Q12052-F1.cif  
DSSP Secondary Structures   Q12052.dssp  





Publications:

Title Authors Journal Details PubMed Id DOI
Specificity and mechanism of RNA cap guanine-N2 methyltransferase (Tgs1). Hausmann S, Shuman S J Biol Chem [details] 15590684 -
Hypermethylation of the cap structure of both yeast snRNAs and snoRNAs requires a conserved methyltransferase that is localized to the nucleolus. Mouaikel J, Verheggen C, Bertrand E, Tazi J, Bordonne R Mol Cell [details] 11983179 -
Sequence-structure-function relationships of Tgs1, the yeast snRNA/snoRNA cap hypermethylase. Mouaikel J, Bujnicki JM, Tazi J, Bordonne R Nucleic Acids Res [details] 12907733 -
Hypermethylation of yeast telomerase RNA by the snRNA and snoRNA methyltransferase Tgs1. Franke J, Gehlen J, Ehrenhofer-Murray AE J Cell Sci [details] 18840651 -