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Superfamilies
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Superfamily
Description
Architecture
Class
n° Families
Structures
23S-methyl
Superfamily of 23S-methyl
2H
structured_simple
1
5_ureB_sRNA
Superfamily of 5_ureB_sRNA
complex unclassified
structured_complex
1
5S_rRNA
Superfamily of 5S_rRNA
rRNA
structured_complex
4
6C
Superfamily of 6C
pseudoknot_simple
structured_simple
1
6S
Superfamily of 6S
hairpin
structured_simple
1
6S-Flavo
Superfamily of 6S-Flavo
hairpin
structured_simple
1
7SK
Superfamily of 7SK
2H
structured_simple
2
Aar
Superfamily of Aar
complex unclassified
structured_complex
1
AbsR11
Superfamily of AbsR11
complex unclassified
structured_complex
1
AbsR25
Superfamily of AbsR25
2H
structured_simple
1
AbsR28
Superfamily of AbsR28
complex unclassified
structured_complex
1
ACAT
Superfamily of ACAT
3H
structured_simple
1
Acido-1
Superfamily of Acido-1
2H
structured_simple
1
Acido-Lenti-1
Superfamily of Acido-Lenti-1
2H
structured_simple
1
Actino-pnp
Superfamily of Actino-pnp
hairpin
structured_simple
1
adapt33_1
Superfamily of adapt33_1
2H
structured_simple
1
adapt33_2
Superfamily of adapt33_2
hairpin
structured_simple
1
adapt33_3
Superfamily of adapt33_3
4WJ
structured_simple
1
adapt33_4
Superfamily of adapt33_4
hairpin
structured_simple
1
AEV_CRE
Superfamily of AEV_CRE
hairpin
structured_simple
1
AfaR
Superfamily of AfaR
3WJ
structured_simple
1
Afu_182
Superfamily of Afu_182
2H
structured_simple
1
Afu_203
Superfamily of Afu_203
2H
structured_simple
1
Afu_254
Superfamily of Afu_254
2H
structured_simple
1
Afu_309
Superfamily of Afu_309
complex unclassified
structured_complex
1
AgvB
Superfamily of AgvB
3H
structured_simple
1
AilA_thermometer
Superfamily of AilA_thermometer
2H
structured_simple
1
Alfamo_CPB
Superfamily of Alfamo_CPB
complex unclassified
structured_complex
1
ALIL
Superfamily of ALIL
2H
structured_simple
1
Alpha_RBS
Superfamily of Alpha_RBS
complex unclassified
structured_complex
1
AMV_RNA1_SL
Superfamily of AMV_RNA1_SL
hairpin
structured_simple
1
AniS
Superfamily of AniS
2H
structured_simple
1
Anti-Q_RNA
Superfamily of Anti-Q_RNA
3WJ
structured_simple
1
Antizyme_FSE
Superfamily of Antizyme_FSE
pseudoknot_simple
structured_simple
1
ApoB_5_CRE
Superfamily of ApoB_5_CRE
complex unclassified
structured_complex
1
ar14
Superfamily of ar14
3H
structured_simple
1
ar35
Superfamily of ar35
3H
structured_simple
1
ar45
Superfamily of ar45
4WJ
structured_simple
1
ar7
Superfamily of ar7
3H
structured_simple
1
ar9
Superfamily of ar9
complex unclassified
structured_complex
1
ArcZ
Superfamily of ArcZ
2H
structured_simple
1
AS1726
Superfamily of AS1726
2H
structured_simple
1
AS1890
Superfamily of AS1890
4WJ
structured_simple
1
asd
Superfamily of asd
complex unclassified
structured_complex
1
AsdA
Superfamily of AsdA
2H
structured_simple
1
ASdes
Superfamily of ASdes
3WJ
structured_simple
1
ASpks
Superfamily of ASpks
2H
structured_simple
1
AsrC
Superfamily of AsrC
complex unclassified
structured_complex
1
astro_FSE
Superfamily of astro_FSE
pseudoknot_simple
structured_simple
1
asX1
Superfamily of asX1
3WJ
structured_simple
1
asX2
Superfamily of asX2
2H
structured_simple
1
asX3
Superfamily of asX3
3WJ
structured_simple
1
asX4
Superfamily of asX4
3WJ
structured_simple
1
asX6
Superfamily of asX6
2H
structured_simple
1
AsxR
Superfamily of AsxR
2H
structured_simple
1
atoC
Superfamily of atoC
2H
structured_simple
1
ATPC
Superfamily of ATPC
3WJ
structured_simple
1
Atu_At1
Superfamily of Atu_At1
complex unclassified
structured_complex
1
Atu_C10
Superfamily of Atu_C10
2H
structured_simple
1
Atu_C3
Superfamily of Atu_C3
complex unclassified
structured_complex
1
Atu_C4
Superfamily of Atu_C4
2H
structured_simple
1
Atu_C6
Superfamily of Atu_C6
2H
structured_simple
1
Atu_C7
Superfamily of Atu_C7
2H
structured_simple
1
Atu_C8
Superfamily of Atu_C8
3WJ
structured_simple
1
Atu_C9
Superfamily of Atu_C9
2H
structured_simple
1
Atu_L1
Superfamily of Atu_L1
complex unclassified
structured_complex
1
Atu_L6
Superfamily of Atu_L6
3H
structured_simple
1
Atu_Ti1
Superfamily of Atu_Ti1
3H
structured_simple
1
Atu_Ti3
Superfamily of Atu_Ti3
hairpin
structured_simple
1
Atu_Ti4
Superfamily of Atu_Ti4
hairpin
structured_simple
1
Avalong_thermometer
Superfamily of Avalong_thermometer
3WJ
structured_simple
1
Avashort_thermometer
Superfamily of Avashort_thermometer
3H
structured_simple
1
b55
Superfamily of b55
2H
structured_simple
1
bablM
Superfamily of bablM
2H
structured_simple
1
babR_5UTR
Superfamily of babR_5UTR
3WJ
structured_simple
1
Bacillaceae-1
Superfamily of Bacillaceae-1
2H
structured_simple
1
Bacillus-plasmid
Superfamily of Bacillus-plasmid
hairpin
structured_simple
1
Bacteroid-trp
Superfamily of Bacteroid-trp
hairpin
structured_simple
1
Bacteroidales-1
Superfamily of Bacteroidales-1
3WJ
structured_simple
1
Bacteroides-1
Superfamily of Bacteroides-1
2H
structured_simple
1
BaMV_CRE
Superfamily of BaMV_CRE
4H
structured_simple
1
BASRCI153
Superfamily of BASRCI153
complex unclassified
structured_complex
1
BASRCI27
Superfamily of BASRCI27
3WJ
structured_simple
1
BASRCI337
Superfamily of BASRCI337
complex unclassified
structured_complex
1
BASRCI408
Superfamily of BASRCI408
complex unclassified
structured_complex
1
BASRCI414
Superfamily of BASRCI414
complex unclassified
structured_complex
1
BASRCII26
Superfamily of BASRCII26
complex unclassified
structured_complex
1
Betaproteobacteria_toxic_sRNA
Superfamily of Betaproteobacteria_toxic_sRNA
2H
structured_simple
1
bicoid_3
Superfamily of bicoid_3
complex unclassified
structured_complex
1
BjrC1505
Superfamily of BjrC1505
complex unclassified
structured_complex
1
BjrC174
Superfamily of BjrC174
3WJ
structured_simple
1
BjrC68
Superfamily of BjrC68
2H
structured_simple
1
BjrC80
Superfamily of BjrC80
4H
structured_simple
1
BLi_r0872
Superfamily of BLi_r0872
hairpin
structured_simple
1
blv_FSE
Superfamily of blv_FSE
pseudoknot_simple
structured_simple
1
BLV_package
Superfamily of BLV_package
2H
structured_simple
1
BM-sr0117
Superfamily of BM-sr0117
hairpin
structured_simple
1
BMV3_UPD-PK1
Superfamily of BMV3_UPD-PK1
pseudoknot_simple
structured_simple
1
BMV3_UPD-PK3
Superfamily of BMV3_UPD-PK3
pseudoknot_simple
structured_simple
1
Bp1_162
Superfamily of Bp1_162
2H
structured_simple
1
Bp1_684
Superfamily of Bp1_684
3WJ
structured_simple
1
Bp1_738
Superfamily of Bp1_738
complex unclassified
structured_complex
1
Bp1_781
Superfamily of Bp1_781
complex unclassified
structured_complex
1
Bp2_287
Superfamily of Bp2_287
complex unclassified
structured_complex
1
BSnc115
Superfamily of BSnc115
2H
structured_simple
1
BSnc119
Superfamily of BSnc119
2H
structured_simple
1
BSnc120
Superfamily of BSnc120
3H
structured_simple
1
BSnc121
Superfamily of BSnc121
3H
structured_simple
1
BSnc140
Superfamily of BSnc140
3H
structured_simple
1
BSnc150
Superfamily of BSnc150
hairpin
structured_simple
1
BSR0441
Superfamily of BSR0441
complex unclassified
structured_complex
1
BSR0602
Superfamily of BSR0602
complex unclassified
structured_complex
1
BSR0626
Superfamily of BSR0626
3H
structured_simple
1
BSR0653
Superfamily of BSR0653
complex unclassified
structured_complex
1
BSR0709
Superfamily of BSR0709
complex unclassified
structured_complex
1
BSR0739
Superfamily of BSR0739
complex unclassified
structured_complex
1
BSR1073
Superfamily of BSR1073
complex unclassified
structured_complex
1
BSR1350
Superfamily of BSR1350
3WJ
structured_simple
1
BsrC
Superfamily of BsrC
hairpin
structured_simple
1
BsrF
Superfamily of BsrF
3WJ
structured_simple
1
BsrG
Superfamily of BsrG
complex unclassified
structured_complex
1
BTE
Superfamily of BTE
4WJ
structured_simple
1
BTH_s1
Superfamily of BTH_s1
complex unclassified
structured_complex
1
BTH_s19
Superfamily of BTH_s19
3WJ
structured_simple
1
BTH_s39
Superfamily of BTH_s39
4WJ
structured_simple
1
bxd_1
Superfamily of bxd_1
3WJ
structured_simple
1
bxd_2
Superfamily of bxd_2
3H
structured_simple
1
bxd_3
Superfamily of bxd_3
2H
structured_simple
1
bxd_4
Superfamily of bxd_4
3WJ
structured_simple
1
bxd_5
Superfamily of bxd_5
2H
structured_simple
1
bxd_6
Superfamily of bxd_6
2H
structured_simple
1
bxd_7
Superfamily of bxd_7
hairpin
structured_simple
1
BYDV_5_UTR
Superfamily of BYDV_5_UTR
4H
structured_simple
1
c-di-GMP-I
Superfamily of c-di-GMP-I
2H
structured_simple
1
c-di-GMP-II
Superfamily of c-di-GMP-II
complex unclassified
structured_complex
1
C/D-box
Superfamily of C/D-box
hairpin
structured_simple
474
C0299
Superfamily of C0299
2H
structured_simple
1
C0465
Superfamily of C0465
3H
structured_simple
1
C0719
Superfamily of C0719
complex unclassified
structured_complex
1
C1_109596F_thermometer
Superfamily of C1_109596F_thermometer
complex unclassified
structured_complex
1
C4
Superfamily of C4
3WJ
structured_simple
1
CAESAR
Superfamily of CAESAR
3WJ
structured_simple
1
Cardiovirus_CRE
Superfamily of Cardiovirus_CRE
hairpin
structured_simple
1
CbSR1
Superfamily of CbSR1
complex unclassified
structured_complex
1
CbSR12
Superfamily of CbSR12
complex unclassified
structured_complex
1
CbSR14
Superfamily of CbSR14
3WJ
structured_simple
1
CbSR2
Superfamily of CbSR2
complex unclassified
structured_complex
1
CbSR3
Superfamily of CbSR3
complex unclassified
structured_complex
1
CbSR4
Superfamily of CbSR4
complex unclassified
structured_complex
1
CbSR9
Superfamily of CbSR9
complex unclassified
structured_complex
1
CC0196
Superfamily of CC0196
hairpin
structured_simple
1
CC0734
Superfamily of CC0734
2H
structured_simple
1
CC1840
Superfamily of CC1840
2H
structured_simple
1
CC2171
Superfamily of CC2171
complex unclassified
structured_complex
1
CC3513
Superfamily of CC3513
3WJ
structured_simple
1
CC3552
Superfamily of CC3552
3WJ
structured_simple
1
CC3664
Superfamily of CC3664
3H
structured_simple
1
CDKN2B-AS
Superfamily of CDKN2B-AS
complex unclassified
structured_complex
1
CDKN2B-AS_2
Superfamily of CDKN2B-AS_2
2H
structured_simple
1
CDKN2B-AS_3
Superfamily of CDKN2B-AS_3
3H
structured_simple
1
ceN115
Superfamily of ceN115
3WJ
structured_simple
1
ceN23-1
Superfamily of ceN23-1
hairpin
structured_simple
1
ceN56
Superfamily of ceN56
3WJ
structured_simple
1
ceN72-3_ceN74-2
Superfamily of ceN72-3_ceN74-2
4WJ
structured_simple
1
ceN93
Superfamily of ceN93
2H
structured_simple
1
Cgb105
Superfamily of Cgb105
4WJ
structured_simple
1
Chlorobi-1
Superfamily of Chlorobi-1
2H
structured_simple
1
Chlorobi-RRM
Superfamily of Chlorobi-RRM
2H
structured_simple
1
Chloroflexi-1
Superfamily of Chloroflexi-1
2H
structured_simple
1
cHP
Superfamily of cHP
hairpin
structured_simple
1
Cis2_sRNA
Superfamily of Cis2_sRNA
complex unclassified
structured_complex
1
Cis52_sRNA
Superfamily of Cis52_sRNA
3WJ
structured_simple
1
Cis8_sRNA
Superfamily of Cis8_sRNA
2H
structured_simple
1
Cis90_sRNA
Superfamily of Cis90_sRNA
complex unclassified
structured_complex
1
class_I_RNA
Superfamily of class_I_RNA
hairpin
structured_simple
1
Clostridiales-1
Superfamily of Clostridiales-1
4WJ
structured_simple
1
ClpQY_promoter
Superfamily of ClpQY_promoter
hairpin
structured_simple
1
CLRN1-AS1
Superfamily of CLRN1-AS1
3H
structured_simple
1
CncR1
Superfamily of CncR1
complex unclassified
structured_complex
1
CnfY_thermometer
Superfamily of CnfY_thermometer
hairpin
structured_simple
1
Cobalamin
Superfamily of Cobalamin
4WJ
structured_simple
3
Collinsella-1
Superfamily of Collinsella-1
4H
structured_simple
1
CopA
Superfamily of CopA
2H
structured_simple
1
Corona_FSE
Superfamily of Corona_FSE
pseudoknot_simple
structured_simple
1
Corona_package
Superfamily of Corona_package
hairpin
structured_simple
1
Corona_pk3
Superfamily of Corona_pk3
pseudoknot_simple
structured_simple
1
Corona_SL-III
Superfamily of Corona_SL-III
hairpin
structured_simple
1
CoTC_ribozyme
Superfamily of CoTC_ribozyme
complex unclassified
structured_complex
1
CPEB3_ribozyme
Superfamily of CPEB3_ribozyme
complex unclassified
structured_complex
1
CpoB_ybgF_thermometer
Superfamily of CpoB_ybgF_thermometer
2H
structured_simple
1
crcB
Superfamily of crcB
hairpin
structured_simple
1
CrcZ
Superfamily of CrcZ
complex unclassified
structured_complex
1
CrfA
Superfamily of CrfA
complex unclassified
structured_complex
1
CRISPR-DR
Superfamily of CRISPR-DR
hairpin
structured_simple
64
cspA
Superfamily of cspA
complex unclassified
structured_complex
1
Csr_Rsm_clan
Families that are bound by multiple regulatory proteins called CsrA or RsmA.
complex unclassified
structured_complex
7
csRNA
Superfamily of csRNA
2H
structured_simple
1
ctRNA_p42d
Superfamily of ctRNA_p42d
hairpin
structured_simple
1
ctRNA_pGA1
Superfamily of ctRNA_pGA1
2H
structured_simple
1
ctRNA_pND324
Superfamily of ctRNA_pND324
2H
structured_simple
1
ctRNA_pT181
Superfamily of ctRNA_pT181
2H
structured_simple
1
CTV_rep_sig
Superfamily of CTV_rep_sig
complex unclassified
structured_complex
1
Cyano-1
Superfamily of Cyano-1
hairpin
structured_simple
1
Cyano-2
Superfamily of Cyano-2
3H
structured_simple
1
cyano_het_sRNA
Superfamily of cyano_het_sRNA
2H
structured_simple
1
CyaR_RyeE
Superfamily of CyaR_RyeE
2H
structured_simple
1
DAOA-AS1_1
Superfamily of DAOA-AS1_1
3H
structured_simple
1
DAOA-AS1_2
Superfamily of DAOA-AS1_2
complex unclassified
structured_complex
1
DapZ
Superfamily of DapZ
2H
structured_simple
1
DdR34
Superfamily of DdR34
3WJ
structured_simple
1
Deinococcus_Y_RNA
Superfamily of Deinococcus_Y_RNA
3WJ
structured_simple
1
DENV_SLA
Superfamily of DENV_SLA
3WJ
structured_simple
1
DGCR5
Superfamily of DGCR5
hairpin
structured_simple
1
Diantho_3_UTR
Superfamily of Diantho_3_UTR
4H
structured_simple
1
DicF
Superfamily of DicF
hairpin
structured_simple
1
Dictyoglomi-1
Superfamily of Dictyoglomi-1
3WJ
structured_simple
1
DISC2
Superfamily of DISC2
2H
structured_simple
1
DLEU1_1
Superfamily of DLEU1_1
complex unclassified
structured_complex
1
DLEU1_2
Superfamily of DLEU1_2
complex unclassified
structured_complex
1
DLEU2_1
Superfamily of DLEU2_1
2H
structured_simple
1
DLEU2_2
Superfamily of DLEU2_2
2H
structured_simple
1
DLEU2_3
Superfamily of DLEU2_3
hairpin
structured_simple
1
DLEU2_4
Superfamily of DLEU2_4
2H
structured_simple
1
DLEU2_5
Superfamily of DLEU2_5
hairpin
structured_simple
1
DLEU2_6
Superfamily of DLEU2_6
4H
structured_simple
1
DLG2-AS1_1
Superfamily of DLG2-AS1_1
4H
structured_simple
1
DLG2-AS1_2
Superfamily of DLG2-AS1_2
multiple_domains
structured_complex
1
DLX6-AS1_1
Superfamily of DLX6-AS1_1
hairpin
structured_simple
1
DLX6-AS1_2
Superfamily of DLX6-AS1_2
3WJ
structured_simple
1
DM_SisR1
Superfamily of DM_SisR1
complex unclassified
structured_complex
1
DnaX
Superfamily of DnaX
hairpin
structured_simple
1
Downstream-peptide
Superfamily of Downstream-peptide
complex unclassified
structured_complex
1
DPB
Superfamily of DPB
hairpin
structured_simple
1
drz-agam-1
Superfamily of drz-agam-1
3WJ
structured_simple
1
drz-agam-2-2
Superfamily of drz-agam-2-2
complex unclassified
structured_complex
1
DsrA
Superfamily of DsrA
3H
structured_simple
1
EAV_LTH
Superfamily of EAV_LTH
hairpin
structured_simple
1
EBER1
Superfamily of EBER1
complex unclassified
structured_complex
1
EBER2
Superfamily of EBER2
3WJ
structured_simple
1
EBv-sisRNA-1
Superfamily of EBv-sisRNA-1
2H
structured_simple
1
EBv-sisRNA-2
Superfamily of EBv-sisRNA-2
hairpin
structured_simple
1
eeev_FSE
Superfamily of eeev_FSE
hairpin
structured_simple
1
EF0408_EF0409
Superfamily of EF0408_EF0409
complex unclassified
structured_complex
1
EF0605_EF0606
Superfamily of EF0605_EF0606
3H
structured_simple
1
EF0820_EF0821
Superfamily of EF0820_EF0821
complex unclassified
structured_complex
1
EF0869_EF0870
Superfamily of EF0869_EF0870
complex unclassified
structured_complex
1
EF1368_EF1369
Superfamily of EF1368_EF1369
complex unclassified
structured_complex
1
EF3314_EF3315
Superfamily of EF3314_EF3315
4H
structured_simple
1
eiav_FSE
Superfamily of eiav_FSE
hairpin
structured_simple
1
enod40
Superfamily of enod40
3H
structured_simple
1
Entero_5_CRE
Superfamily of Entero_5_CRE
4WJ
structured_simple
1
Entero_CRE
Superfamily of Entero_CRE
hairpin
structured_simple
1
Entero_OriR
Superfamily of Entero_OriR
complex unclassified
structured_complex
1
epsC
Superfamily of epsC
complex unclassified
structured_complex
1
Erse
Superfamily of Erse
complex unclassified
structured_complex
1
ES003
Superfamily of ES003
2H
structured_simple
1
ES036
Superfamily of ES036
hairpin
structured_simple
1
ES056
Superfamily of ES056
2H
structured_simple
1
ES173
Superfamily of ES173
hairpin
structured_simple
1
ES205
Superfamily of ES205
hairpin
structured_simple
1
ES222
Superfamily of ES222
2H
structured_simple
1
ES239
Superfamily of ES239
3H
structured_simple
1
Esr41
Superfamily of Esr41
3H
structured_simple
1
Evf-2_5p
Superfamily of Evf-2_5p
3H
structured_simple
1
F6
Superfamily of F6
hairpin
structured_simple
1
FAM13A-AS1_1
Superfamily of FAM13A-AS1_1
4H
structured_simple
1
FAM13A-AS1_2
Superfamily of FAM13A-AS1_2
3WJ
structured_simple
1
FAS-AS1
Superfamily of FAS-AS1
multiple_domains
structured_complex
1
FasX
Superfamily of FasX
3H
structured_simple
1
FdoG1_thermometer
Superfamily of FdoG1_thermometer
complex unclassified
structured_complex
1
ffh
Superfamily of ffh
hairpin
structured_simple
1
FIE3
Superfamily of FIE3
hairpin
structured_simple
1
FinP-traJ
Superfamily of FinP-traJ
2H
structured_simple
2
fiv_FSE
Superfamily of fiv_FSE
pseudoknot_simple
structured_simple
1
Flavi_CRE
Superfamily of Flavi_CRE
2H
structured_simple
1
flavi_FSE
Superfamily of flavi_FSE
pseudoknot_simple
structured_simple
1
Flavivirus_DB
Superfamily of Flavivirus_DB
3WJ
structured_simple
1
Flavivirus_SLIV
Superfamily of Flavivirus_SLIV
3WJ
structured_simple
1
Flavo-1
Superfamily of Flavo-1
hairpin
structured_simple
1
flg-Rhizobiales
Superfamily of flg-Rhizobiales
3H
structured_simple
1
flpD
Superfamily of flpD
hairpin
structured_simple
1
FMN
Superfamily of FMN
complex unclassified
structured_complex
1
FMR1-AS1_1
Superfamily of FMR1-AS1_1
hairpin
structured_simple
1
FMR1-AS1_2
Superfamily of FMR1-AS1_2
hairpin
structured_simple
1
FourU
Superfamily of FourU
2H
structured_simple
1
frnS
Superfamily of frnS
3H
structured_simple
1
FsrA
Superfamily of FsrA
2H
structured_simple
1
fstAT
Superfamily of fstAT
3WJ
structured_simple
1
FtrA
Superfamily of FtrA
3H
structured_simple
1
FtrB
Superfamily of FtrB
3H
structured_simple
1
FTX_1
Superfamily of FTX_1
2H
structured_simple
1
FTX_2
Superfamily of FTX_2
2H
structured_simple
1
FTX_3
Superfamily of FTX_3
3WJ
structured_simple
1
FTX_4
Superfamily of FTX_4
4WJ
structured_simple
1
FTX_5
Superfamily of FTX_5
complex unclassified
structured_complex
1
Fwd6_3p_UTR
Superfamily of Fwd6_3p_UTR
4H
structured_simple
1
G-CSF_SLDE
Superfamily of G-CSF_SLDE
3H
structured_simple
1
g2
Superfamily of g2
hairpin
structured_simple
1
GABA3
Superfamily of GABA3
hairpin
structured_simple
1
gabT
Superfamily of gabT
hairpin
structured_simple
1
gadd7
Superfamily of gadd7
complex unclassified
structured_complex
1
GadY
Superfamily of GadY
3H
structured_simple
1
GAIT
Superfamily of GAIT
hairpin
structured_simple
1
Gammaretro_CES
Superfamily of Gammaretro_CES
3H
structured_simple
1
GcvB
Superfamily of GcvB
complex unclassified
structured_complex
1
GHRLOS
Superfamily of GHRLOS
3H
structured_simple
1
GIR1
Superfamily of GIR1
complex unclassified
structured_complex
1
Gl_RNase_MRP
Superfamily of Gl_RNase_MRP
3H
structured_simple
1
Glm
Superfamily of Glm
3WJ
structured_simple
2
glmS
Superfamily of glmS
4H
structured_simple
1
glnA
Superfamily of glnA
3WJ
structured_simple
1
GlsR16_miR3
Superfamily of GlsR16_miR3
hairpin
structured_simple
1
GlsR17_miR2
Superfamily of GlsR17_miR2
hairpin
structured_simple
1
GlsR1_miR6
Superfamily of GlsR1_miR6
hairpin
structured_simple
1
GlsR2_miR4
Superfamily of GlsR2_miR4
hairpin
structured_simple
1
GlsR8_miR10
Superfamily of GlsR8_miR10
hairpin
structured_simple
1
Glycine
Superfamily of Glycine
3WJ
structured_simple
1
GmglnB1_5p_UTR
Superfamily of GmglnB1_5p_UTR
2H
structured_simple
1
GNAS-AS1_1
Superfamily of GNAS-AS1_1
2H
structured_simple
1
GNAS-AS1_2
Superfamily of GNAS-AS1_2
2H
structured_simple
1
GNAS-AS1_3
Superfamily of GNAS-AS1_3
hairpin
structured_simple
1
GNAS-AS1_4
Superfamily of GNAS-AS1_4
complex unclassified
structured_complex
1
GNAS-AS1_5
Superfamily of GNAS-AS1_5
hairpin
structured_simple
1
GOLLD
Superfamily of GOLLD
complex unclassified
structured_complex
1
GP_knot1
Superfamily of GP_knot1
pseudoknot_simple
structured_simple
1
GP_knot2
Superfamily of GP_knot2
pseudoknot_simple
structured_simple
1
greA
Superfamily of greA
4H
structured_simple
1
GRIK4_3p_UTR
Superfamily of GRIK4_3p_UTR
hairpin
structured_simple
1
Gurken
Superfamily of Gurken
hairpin
structured_simple
1
Gut-1
Superfamily of Gut-1
3H
structured_simple
1
gyrA
Superfamily of gyrA
2H
structured_simple
1
H/ACA-box
Superfamily of H/ACA-box
2H
structured_simple
294
H19_1
Superfamily of H19_1
hairpin
structured_simple
1
H19_2
Superfamily of H19_2
hairpin
structured_simple
1
H19_3
Superfamily of H19_3
2H
structured_simple
1
h2cR
Superfamily of h2cR
hairpin
structured_simple
1
Hairpin ribozyme
Superfamily of Hairpin ribozyme
hairpin
structured_simple
1
Hammerhead
Superfamily of Hammerhead
3WJ
structured_simple
5
HAR1A
Superfamily of HAR1A
3WJ
structured_simple
1
Hatchet
Superfamily of Hatchet
2H
structured_simple
1
HAV_CRE
Superfamily of HAV_CRE
hairpin
structured_simple
1
HCV_ARF_SL
Superfamily of HCV_ARF_SL
2H
structured_simple
1
HCV_package
Superfamily of HCV_package
hairpin
structured_simple
1
HCV_package-SL4629
Superfamily of HCV_package-SL4629
hairpin
structured_simple
1
HCV_package-SL6067
Superfamily of HCV_package-SL6067
hairpin
structured_simple
1
HCV_package-SL733
Superfamily of HCV_package-SL733
hairpin
structured_simple
1
HCV_SLIV
Superfamily of HCV_SLIV
hairpin
structured_simple
1
HCV_SLVII
Superfamily of HCV_SLVII
hairpin
structured_simple
1
HCV_X2
Superfamily of HCV_X2
3H
structured_simple
1
HDV-F-prausnitzii
Superfamily of HDV-F-prausnitzii
2H
structured_simple
1
HDV_ribozyme
Superfamily of HDV_ribozyme
complex unclassified
structured_complex
1
HEARO
Superfamily of HEARO
complex unclassified
structured_complex
1
Hepadnavirus_epsilon
Superfamily of Hepadnavirus_epsilon
hairpin
structured_simple
2
HepC_CRE
Superfamily of HepC_CRE
hairpin
structured_simple
1
HepE_CRE
Superfamily of HepE_CRE
2H
structured_simple
1
HgcC
Superfamily of HgcC
4WJ
structured_simple
1
HgcE
Superfamily of HgcE
hairpin
structured_simple
1
HgcF
Superfamily of HgcF
3H
structured_simple
1
HgcG
Superfamily of HgcG
3WJ
structured_simple
1
hilD_3p_UTR
Superfamily of hilD_3p_UTR
complex unclassified
structured_complex
1
His_leader
Superfamily of His_leader
3H
structured_simple
1
Histone3
Superfamily of Histone3
3WJ
structured_simple
1
HIV-1_DIS
Superfamily of HIV-1_DIS
hairpin
structured_simple
1
HIV-1_SD
Superfamily of HIV-1_SD
hairpin
structured_simple
1
HIV-1_SL3
Superfamily of HIV-1_SL3
hairpin
structured_simple
1
HIV-1_SL4
Superfamily of HIV-1_SL4
hairpin
structured_simple
1
HIV_FE
Superfamily of HIV_FE
hairpin
structured_simple
1
HIV_FS2
Superfamily of HIV_FS2
hairpin
structured_simple
1
HIV_GSL3
Superfamily of HIV_GSL3
hairpin
structured_simple
1
HIV_PBS
Superfamily of HIV_PBS
3WJ
structured_simple
1
HIV_POL-1_SL
Superfamily of HIV_POL-1_SL
3WJ
structured_simple
1
HLE
Superfamily of HLE
2H
structured_simple
1
hopC
Superfamily of hopC
hairpin
structured_simple
1
HOTAIR_1
Superfamily of HOTAIR_1
hairpin
structured_simple
1
HOTAIR_2
Superfamily of HOTAIR_2
2H
structured_simple
1
HOTAIR_3
Superfamily of HOTAIR_3
hairpin
structured_simple
1
HOTAIRM1_1
Superfamily of HOTAIRM1_1
multiple_domains
structured_complex
1
HOTAIRM1_2
Superfamily of HOTAIRM1_2
multiple_domains
structured_complex
1
HOTAIRM1_3
Superfamily of HOTAIRM1_3
hairpin
structured_simple
1
HOTAIRM1_4
Superfamily of HOTAIRM1_4
3WJ
structured_simple
1
HOTAIRM1_5
Superfamily of HOTAIRM1_5
3WJ
structured_simple
1
HOTTIP_1
Superfamily of HOTTIP_1
hairpin
structured_simple
1
HOTTIP_2
Superfamily of HOTTIP_2
multiple_domains
structured_complex
1
HOTTIP_3
Superfamily of HOTTIP_3
complex unclassified
structured_complex
1
HOTTIP_4
Superfamily of HOTTIP_4
multiple_domains
structured_complex
1
HOXA11-AS1_1
Superfamily of HOXA11-AS1_1
3H
structured_simple
1
HOXA11-AS1_2
Superfamily of HOXA11-AS1_2
complex unclassified
structured_complex
1
HOXA11-AS1_3
Superfamily of HOXA11-AS1_3
4WJ
structured_simple
1
HOXA11-AS1_4
Superfamily of HOXA11-AS1_4
complex unclassified
structured_complex
1
HOXA11-AS1_5
Superfamily of HOXA11-AS1_5
multiple_domains
structured_complex
1
HOXA11-AS1_6
Superfamily of HOXA11-AS1_6
complex unclassified
structured_complex
1
HOXB13-AS1_1
Superfamily of HOXB13-AS1_1
4H
structured_simple
1
HOXB13-AS1_2
Superfamily of HOXB13-AS1_2
3WJ
structured_simple
1
HPnc0260
Superfamily of HPnc0260
3H
structured_simple
1
HPnc0580
Superfamily of HPnc0580
3H
structured_simple
1
HrrF
Superfamily of HrrF
3H
structured_simple
1
Hrs1
Superfamily of Hrs1
2H
structured_simple
1
Hrs10
Superfamily of Hrs10
3H
structured_simple
1
Hrs12
Superfamily of Hrs12
3H
structured_simple
1
Hrs13
Superfamily of Hrs13
3H
structured_simple
1
Hrs21
Superfamily of Hrs21
4WJ
structured_simple
1
hsp17
Superfamily of hsp17
hairpin
structured_simple
1
Hsp83_3_UTR
Superfamily of Hsp83_3_UTR
complex unclassified
structured_complex
1
Hsp90_CRE
Superfamily of Hsp90_CRE
3WJ
structured_simple
1
HSR-omega_1
Superfamily of HSR-omega_1
hairpin
structured_simple
1
HSR-omega_2
Superfamily of HSR-omega_2
hairpin
structured_simple
1
HSUR
Superfamily of HSUR
2H
structured_simple
1
htlv_FSE
Superfamily of htlv_FSE
hairpin
structured_simple
1
HtrA_thermometer
Superfamily of HtrA_thermometer
hairpin
structured_simple
1
HTT-AS1_1
Superfamily of HTT-AS1_1
multiple_domains
structured_complex
1
HTT-AS1_2
Superfamily of HTT-AS1_2
3WJ
structured_simple
1
HTT-AS1_3
Superfamily of HTT-AS1_3
3WJ
structured_simple
1
HULC
Superfamily of HULC
2H
structured_simple
1
hvt-mir-H
Superfamily of hvt-mir-H
hairpin
structured_simple
1
HYMAI
Superfamily of HYMAI
complex unclassified
structured_complex
1
IBV_D-RNA
Superfamily of IBV_D-RNA
hairpin
structured_simple
1
icaR_3p_UTR
Superfamily of icaR_3p_UTR
complex unclassified
structured_complex
1
icaR_5p_UTR
Superfamily of icaR_5p_UTR
hairpin
structured_simple
1
IFN_gamma
Superfamily of IFN_gamma
complex unclassified
structured_complex
1
IhtA
Superfamily of IhtA
3H
structured_simple
1
IMES-1
Superfamily of IMES-1
complex unclassified
structured_complex
1
IMES-2
Superfamily of IMES-2
4H
structured_simple
1
IMES-3
Superfamily of IMES-3
2H
structured_simple
1
IMES-4
Superfamily of IMES-4
3H
structured_simple
1
Intron_gpI
Superfamily of Intron_gpI
Intron_gpI-like
structured_complex
5
Intron_gpII
Superfamily of Intron_gpII
Intron_gpII-like
structured_complex
5
InvR
Superfamily of InvR
3WJ
structured_simple
1
IRE_I
Superfamily of IRE_I
hairpin
structured_simple
1
IRE_II
Superfamily of IRE_II
hairpin
structured_simple
1
IRES_APC
Superfamily of IRES_APC
hairpin
structured_simple
1
IRES_Bag1
Superfamily of IRES_Bag1
IRES_multi_domain
structured_complex
1
IRES_Bip
Superfamily of IRES_Bip
IRES_multi_domain
structured_complex
1
IRES_c-myc
Superfamily of IRES_c-myc
IRES_multi_domain
structured_complex
1
IRES_c-sis
Superfamily of IRES_c-sis
IRES_multi_domain
structured_complex
1
IRES_Cripavirus
Superfamily of IRES_Cripavirus
IRES_multi_domain
structured_complex
1
IRES_Cx32
Superfamily of IRES_Cx32
IRES_multi_domain
structured_complex
1
IRES_Cx43
Superfamily of IRES_Cx43
IRES_multi_domain
structured_complex
1
IRES_cyp24a1
Superfamily of IRES_cyp24a1
IRES_multi_domain
structured_complex
1
IRES_EBNA
Superfamily of IRES_EBNA
IRES_multi_domain
structured_complex
1
IRES_FGF1
Superfamily of IRES_FGF1
IRES_multi_domain
structured_complex
1
IRES_FGF2
Superfamily of IRES_FGF2
IRES_multi_domain
structured_complex
1
IRES_HCV
Superfamily of IRES_HCV
IRES_multi_domain
structured_complex
1
IRES_HepA
Superfamily of IRES_HepA
IRES_multi_domain
structured_complex
1
IRES_HIF1
Superfamily of IRES_HIF1
IRES_multi_domain
structured_complex
1
IRES_Hsp70
Superfamily of IRES_Hsp70
IRES_multi_domain
structured_complex
1
IRES_IGF2
Superfamily of IRES_IGF2
IRES_multi_domain
structured_complex
1
IRES_KSHV
Superfamily of IRES_KSHV
IRES_multi_domain
structured_complex
1
IRES_Kv1_4
Superfamily of IRES_Kv1_4
IRES_multi_domain
structured_complex
1
IRES_L-myc
Superfamily of IRES_L-myc
IRES_multi_domain
structured_complex
1
IRES_mnt
Superfamily of IRES_mnt
IRES_multi_domain
structured_complex
1
IRES_n-myc
Superfamily of IRES_n-myc
IRES_multi_domain
structured_complex
1
IRES_Pesti
Superfamily of IRES_Pesti
IRES_multi_domain
structured_complex
1
IRES_Picorna
Superfamily of IRES_Picorna
IRES_multi_domain
structured_complex
1
IRES_Picorna_2
Superfamily of IRES_Picorna_2
IRES_multi_domain
structured_complex
1
IRES_RhPV
Superfamily of IRES_RhPV
IRES_multi_domain
structured_complex
1
IRES_Tobamo
Superfamily of IRES_Tobamo
IRES_multi_domain
structured_complex
1
IRES_TrkB
Superfamily of IRES_TrkB
IRES_multi_domain
structured_complex
1
IRES_VEGF_A
Superfamily of IRES_VEGF_A
IRES_multi_domain
structured_complex
1
IS009
Superfamily of IS009
3WJ
structured_simple
1
IS061
Superfamily of IS061
complex unclassified
structured_complex
1
IS102
Superfamily of IS102
4H
structured_simple
1
IS1222_FSE
Superfamily of IS1222_FSE
3WJ
structured_simple
1
IS128
Superfamily of IS128
complex unclassified
structured_complex
1
iscRS
Superfamily of iscRS
complex unclassified
structured_complex
1
IscS1_thermometer
Superfamily of IscS1_thermometer
4WJ
structured_simple
1
isrA
Superfamily of isrA
2H
structured_simple
1
isrB
Superfamily of isrB
3H
structured_simple
1
isrC
Superfamily of isrC
4WJ
structured_simple
1
isrD
Superfamily of isrD
2H
structured_simple
1
isrF
Superfamily of isrF
complex unclassified
structured_complex
1
isrG
Superfamily of isrG
complex unclassified
structured_complex
1
isrH
Superfamily of isrH
complex unclassified
structured_complex
1
isrI
Superfamily of isrI
2H
structured_simple
1
isrJ
Superfamily of isrJ
2H
structured_simple
1
isrK
Superfamily of isrK
3H
structured_simple
1
isrL
Superfamily of isrL
complex unclassified
structured_complex
1
IsrM
Superfamily of IsrM
complex unclassified
structured_complex
1
isrN
Superfamily of isrN
3WJ
structured_simple
1
isrO
Superfamily of isrO
3WJ
structured_simple
1
isrP
Superfamily of isrP
3WJ
structured_simple
1
isrQ
Superfamily of isrQ
complex unclassified
structured_complex
1
IsrR
Superfamily of IsrR
hairpin
structured_simple
1
istR
Superfamily of istR
3H
structured_simple
1
JA01
Superfamily of JA01
4WJ
structured_simple
1
JA02
Superfamily of JA02
3H
structured_simple
1
JA03
Superfamily of JA03
complex unclassified
structured_complex
1
JA04
Superfamily of JA04
2H
structured_simple
1
JEV_hairpin
Superfamily of JEV_hairpin
hairpin
structured_simple
1
JPX_1
Superfamily of JPX_1
multiple_domains
structured_complex
1
JPX_2
Superfamily of JPX_2
2H
structured_simple
1
JUMPstart
Superfamily of JUMPstart
hairpin
structured_simple
1
K10_TLS
Superfamily of K10_TLS
hairpin
structured_simple
1
K_chan_RES
Superfamily of K_chan_RES
hairpin
structured_simple
1
KatA_thermometer
Superfamily of KatA_thermometer
4H
structured_simple
1
KCNQ1OT1_1
Superfamily of KCNQ1OT1_1
hairpin
structured_simple
1
KCNQ1OT1_2
Superfamily of KCNQ1OT1_2
complex unclassified
structured_complex
1
KCNQ1OT1_3
Superfamily of KCNQ1OT1_3
hairpin
structured_simple
1
KCNQ1OT1_5
Superfamily of KCNQ1OT1_5
2H
structured_simple
1
KRAS_3UTR
Superfamily of KRAS_3UTR
hairpin
structured_simple
1
L10_leader
Superfamily of L10_leader
2H
structured_simple
1
L13_leader
Superfamily of L13_leader
hairpin
structured_simple
1
L17DE
Superfamily of L17DE
2H
structured_simple
1
L19_leader
Superfamily of L19_leader
hairpin
structured_simple
1
L20_leader
Superfamily of L20_leader
3H
structured_simple
1
L21_leader
Superfamily of L21_leader
hairpin
structured_simple
1
lactis-plasmid
Superfamily of lactis-plasmid
2H
structured_simple
1
Lacto-rpoB
Superfamily of Lacto-rpoB
hairpin
structured_simple
1
Lacto-usp
Superfamily of Lacto-usp
hairpin
structured_simple
1
Lambda_thermo
Superfamily of Lambda_thermo
hairpin
structured_simple
1
LasI_thermometer
Superfamily of LasI_thermometer
3H
structured_simple
1
LcrF_thermometer
Superfamily of LcrF_thermometer
3WJ
structured_simple
1
LDH1_5p_UTR
Superfamily of LDH1_5p_UTR
3WJ
structured_simple
1
let-7
Superfamily of let-7
hairpin
structured_simple
1
leu-phe_leader
Superfamily of leu-phe_leader
3WJ
structured_simple
1
Leu_leader
Superfamily of Leu_leader
2H
structured_simple
1
LhrA
Superfamily of LhrA
4H
structured_simple
1
LhrC
Superfamily of LhrC
2H
structured_simple
1
lin-4
Superfamily of lin-4
hairpin
structured_simple
1
LINC00901
Superfamily of LINC00901
complex unclassified
structured_complex
1
lincRNA-p21_1
Superfamily of lincRNA-p21_1
complex unclassified
structured_complex
1
lincRNA-p21_2
Superfamily of lincRNA-p21_2
hairpin
structured_simple
1
livK
Superfamily of livK
2H
structured_simple
1
LLnc147
Superfamily of LLnc147
4H
structured_simple
1
Lnt
Superfamily of Lnt
hairpin
structured_simple
1
LSU_rRNA
Superfamily of LSU_rRNA
rRNA
structured_complex
5
lsy-6
Superfamily of lsy-6
hairpin
structured_simple
1
Lysine
Superfamily of Lysine
complex unclassified
structured_complex
1
MALAT1
Superfamily of MALAT1
2H
structured_simple
1
manA
Superfamily of manA
complex unclassified
structured_complex
1
ManX_thermometer
Superfamily of ManX_thermometer
hairpin
structured_simple
1
MAT2A_A
Superfamily of MAT2A_A
hairpin
structured_simple
1
MAT2A_B
Superfamily of MAT2A_B
hairpin
structured_simple
1
MAT2A_C
Superfamily of MAT2A_C
hairpin
structured_simple
1
MAT2A_D
Superfamily of MAT2A_D
hairpin
structured_simple
1
MAT2A_E
Superfamily of MAT2A_E
hairpin
structured_simple
1
MAT2A_F
Superfamily of MAT2A_F
hairpin
structured_simple
1
Mcr7
Superfamily of Mcr7
complex unclassified
structured_complex
1
MCS4
Superfamily of MCS4
3H
structured_simple
1
MEG3_2
Superfamily of MEG3_2
2H
structured_simple
1
MEG8_1
Superfamily of MEG8_1
hairpin
structured_simple
1
MEG8_2
Superfamily of MEG8_2
4WJ
structured_simple
1
MEG8_3
Superfamily of MEG8_3
multiple_domains
structured_complex
1
MESTIT1_1
Superfamily of MESTIT1_1
4H
structured_simple
1
MESTIT1_2
Superfamily of MESTIT1_2
multiple_domains
structured_complex
1
MESTIT1_3
Superfamily of MESTIT1_3
2H
structured_simple
1
Methylobacterium-1
Superfamily of Methylobacterium-1
3H
structured_simple
1
MFR
Superfamily of MFR
3WJ
structured_simple
1
Mg_sensor
Superfamily of Mg_sensor
3WJ
structured_simple
1
MIAT_exon1
Superfamily of MIAT_exon1
4WJ
structured_simple
1
MIAT_exon5_1
Superfamily of MIAT_exon5_1
2H
structured_simple
1
MIAT_exon5_2
Superfamily of MIAT_exon5_2
2H
structured_simple
1
MIAT_exon5_3
Superfamily of MIAT_exon5_3
complex unclassified
structured_complex
1
MicA
Superfamily of MicA
2H
structured_simple
1
MicC
Superfamily of MicC
3H
structured_simple
1
MicF
Superfamily of MicF
2H
structured_simple
1
MicL
Superfamily of MicL
complex unclassified
structured_complex
1
Mico1
Superfamily of Mico1
complex unclassified
structured_complex
1
MicX
Superfamily of MicX
4H
structured_simple
1
MIMT1_1
Superfamily of MIMT1_1
3WJ
structured_simple
1
mini-ykkC
Superfamily of mini-ykkC
2H
structured_simple
1
mir-1017
Superfamily of mir-1017
hairpin
structured_simple
1
mir-1225
Superfamily of mir-1225
hairpin
structured_simple
1
mir-124
Superfamily of mir-124
hairpin
structured_simple
1
mir-1302
Superfamily of mir-1302
hairpin
structured_simple
1
mir-1306
Superfamily of mir-1306
hairpin
structured_simple
1
mir-132
Superfamily of mir-132
hairpin
structured_simple
1
mir-1419
Superfamily of mir-1419
hairpin
structured_simple
1
mir-1497
Superfamily of mir-1497
hairpin
structured_simple
1
mir-15
Superfamily of mir-15
hairpin
structured_simple
1
mir-166
Superfamily of mir-166
hairpin
structured_simple
1
mir-1662
Superfamily of mir-1662
hairpin
structured_simple
1
mir-1803
Superfamily of mir-1803
hairpin
structured_simple
1
mir-1937
Superfamily of mir-1937
hairpin
structured_simple
1
mir-2494
Superfamily of mir-2494
hairpin
structured_simple
1
mir-252
Superfamily of mir-252
hairpin
structured_simple
1
mir-2780
Superfamily of mir-2780
hairpin
structured_simple
1
mir-2833
Superfamily of mir-2833
hairpin
structured_simple
1
mir-290
Superfamily of mir-290
hairpin
structured_simple
2
mir-2968
Superfamily of mir-2968
hairpin
structured_simple
1
mir-2970
Superfamily of mir-2970
hairpin
structured_simple
1
mir-2973
Superfamily of mir-2973
hairpin
structured_simple
1
mir-2985-2
Superfamily of mir-2985-2
hairpin
structured_simple
1
mir-301
Superfamily of mir-301
hairpin
structured_simple
1
mir-31
Superfamily of mir-31
hairpin
structured_simple
1
mir-327
Superfamily of mir-327
hairpin
structured_simple
1
mir-36
Superfamily of mir-36
hairpin
structured_simple
1
mir-393
Superfamily of mir-393
hairpin
structured_simple
1
mir-554
Superfamily of mir-554
hairpin
structured_simple
1
mir-56
Superfamily of mir-56
hairpin
structured_simple
1
mir-601
Superfamily of mir-601
hairpin
structured_simple
1
mir-611
Superfamily of mir-611
hairpin
structured_simple
1
mir-638
Superfamily of mir-638
hairpin
structured_simple
1
mir-785
Superfamily of mir-785
hairpin
structured_simple
1
mir-788
Superfamily of mir-788
hairpin
structured_simple
1
mir-81
Superfamily of mir-81
hairpin
structured_simple
1
mir-872
Superfamily of mir-872
hairpin
structured_simple
1
mir-924
Superfamily of mir-924
hairpin
structured_simple
1
mir-965
Superfamily of mir-965
hairpin
structured_simple
1
MIR1151
Superfamily of MIR1151
hairpin
structured_simple
1
MIR1223
Superfamily of MIR1223
hairpin
structured_simple
1
MIR159
Superfamily of MIR159
hairpin
structured_simple
1
MIR164
Superfamily of MIR164
hairpin
structured_simple
1
MIR167_1
Superfamily of MIR167_1
hairpin
structured_simple
1
MIR2907
Superfamily of MIR2907
hairpin
structured_simple
1
MIR396
Superfamily of MIR396
hairpin
structured_simple
1
MIR478
Superfamily of MIR478
hairpin
structured_simple
1
MIR807
Superfamily of MIR807
hairpin
structured_simple
1
MIR811
Superfamily of MIR811
hairpin
structured_simple
1
MIR820
Superfamily of MIR820
hairpin
structured_simple
1
MIR821
Superfamily of MIR821
hairpin
structured_simple
1
MIR824
Superfamily of MIR824
hairpin
structured_simple
1
MIR845_2
Superfamily of MIR845_2
hairpin
structured_simple
1
MIR854
Superfamily of MIR854
hairpin
structured_simple
1
miRNA1
Superfamily of miRNA1
hairpin
structured_simple
39
miRNA2
Superfamily of miRNA2
hairpin
structured_simple
428
MNV_3UTR
Superfamily of MNV_3UTR
3H
structured_simple
1
Moco-II
Superfamily of Moco-II
hairpin
structured_simple
1
MOCO_RNA_motif
Superfamily of MOCO_RNA_motif
complex unclassified
structured_complex
1
MOSES4
Superfamily of MOSES4
4WJ
structured_simple
1
MPMV_package
Superfamily of MPMV_package
complex unclassified
structured_complex
1
mraW
Superfamily of mraW
hairpin
structured_simple
1
Ms1
Superfamily of Ms1
complex unclassified
structured_complex
1
MS2
Superfamily of MS2
hairpin
structured_simple
1
Ms_AS-1
Superfamily of Ms_AS-1
3H
structured_simple
1
Ms_AS-4
Superfamily of Ms_AS-4
2H
structured_simple
1
Ms_AS-5
Superfamily of Ms_AS-5
hairpin
structured_simple
1
Ms_AS-8
Superfamily of Ms_AS-8
2H
structured_simple
1
Ms_IGR-2
Superfamily of Ms_IGR-2
2H
structured_simple
1
Ms_IGR-4
Superfamily of Ms_IGR-4
hairpin
structured_simple
1
Ms_IGR-5
Superfamily of Ms_IGR-5
3H
structured_simple
1
Ms_IGR-7
Superfamily of Ms_IGR-7
2H
structured_simple
1
Ms_IGR-8
Superfamily of Ms_IGR-8
hairpin
structured_simple
1
msiK
Superfamily of msiK
hairpin
structured_simple
1
msr
Superfamily of msr
hairpin
structured_simple
1
mtDNA_ssA
Superfamily of mtDNA_ssA
4WJ
structured_simple
1
MtlS
Superfamily of MtlS
3WJ
structured_simple
1
mycoplasma_FSE
Superfamily of mycoplasma_FSE
hairpin
structured_simple
1
naRNA3
Superfamily of naRNA3
2H
structured_simple
1
NBR2
Superfamily of NBR2
hairpin
structured_simple
1
ncr1015
Superfamily of ncr1015
2H
structured_simple
1
ncr1175
Superfamily of ncr1175
2H
structured_simple
1
ncr1241
Superfamily of ncr1241
2H
structured_simple
1
ncr1575
Superfamily of ncr1575
3H
structured_simple
1
ncr952
Superfamily of ncr952
4H
structured_simple
1
ncr982
Superfamily of ncr982
2H
structured_simple
1
ncrMT1302
Superfamily of ncrMT1302
3WJ
structured_simple
1
NCRUPAR_1
Superfamily of NCRUPAR_1
hairpin
structured_simple
1
NCRUPAR_2
Superfamily of NCRUPAR_2
2H
structured_simple
1
ncRv12659
Superfamily of ncRv12659
3H
structured_simple
1
Ncrwmel02
Superfamily of Ncrwmel02
complex unclassified
structured_complex
1
NEAT1_1
Superfamily of NEAT1_1
4WJ
structured_simple
1
NEAT1_2
Superfamily of NEAT1_2
3H
structured_simple
1
NEAT1_3
Superfamily of NEAT1_3
multiple_domains
structured_complex
1
neisseria_FSE
Superfamily of neisseria_FSE
hairpin
structured_simple
1
NiCo
Superfamily of NiCo
4WJ
structured_simple
1
Noro_CRE
Superfamily of Noro_CRE
hairpin
structured_simple
1
nos_TCE
Superfamily of nos_TCE
3WJ
structured_simple
1
NPPA-AS1_1
Superfamily of NPPA-AS1_1
multiple_domains
structured_complex
1
NPPA-AS1_2
Superfamily of NPPA-AS1_2
multiple_domains
structured_complex
1
NPPA-AS1_3
Superfamily of NPPA-AS1_3
3WJ
structured_simple
1
NRF2_IRES
Superfamily of NRF2_IRES
4H
structured_simple
1
NRON
Superfamily of NRON
complex unclassified
structured_complex
1
NrrF
Superfamily of NrrF
2H
structured_simple
1
NrsZ
Superfamily of NrsZ
complex unclassified
structured_complex
1
nse_sRNA
Superfamily of nse_sRNA
2H
structured_simple
1
NsiR1
Superfamily of NsiR1
2H
structured_simple
1
NsiR4
Superfamily of NsiR4
2H
structured_simple
1
NsiR8
Superfamily of NsiR8
3H
structured_simple
1
NsiR9
Superfamily of NsiR9
3H
structured_simple
1
nuoG
Superfamily of nuoG
hairpin
structured_simple
1
Ocean-V
Superfamily of Ocean-V
2H
structured_simple
1
ODC_IRES
Superfamily of ODC_IRES
2H
structured_simple
1
ohsC_RNA
Superfamily of ohsC_RNA
2H
structured_simple
1
OLE
Superfamily of OLE
complex unclassified
structured_complex
1
OmrA-B
Superfamily of OmrA-B
2H
structured_simple
1
OppA_thermometer
Superfamily of OppA_thermometer
complex unclassified
structured_complex
1
OrzO-P
Superfamily of OrzO-P
2H
structured_simple
1
Oskar_OES
Superfamily of Oskar_OES
hairpin
structured_simple
1
ovine_lenti_FSE
Superfamily of ovine_lenti_FSE
complex unclassified
structured_complex
1
OxyS
Superfamily of OxyS
3H
structured_simple
1
P1
Superfamily of P1
2H
structured_simple
1
P10
Superfamily of P10
3WJ
structured_simple
1
P11
Superfamily of P11
4WJ
structured_simple
1
P13
Superfamily of P13
3H
structured_simple
1
P14
Superfamily of P14
3H
structured_simple
1
P15
Superfamily of P15
4H
structured_simple
1
P16
Superfamily of P16
3WJ
structured_simple
1
P17
Superfamily of P17
complex unclassified
structured_complex
1
P18
Superfamily of P18
3WJ
structured_simple
1
P2
Superfamily of P2
3WJ
structured_simple
1
P24
Superfamily of P24
complex unclassified
structured_complex
1
P26
Superfamily of P26
2H
structured_simple
1
P27
Superfamily of P27
4WJ
structured_simple
1
p27_CRE
Superfamily of p27_CRE
2H
structured_simple
1
P31
Superfamily of P31
2H
structured_simple
1
P33
Superfamily of P33
complex unclassified
structured_complex
1
P34
Superfamily of P34
complex unclassified
structured_complex
1
P35
Superfamily of P35
2H
structured_simple
1
P36
Superfamily of P36
2H
structured_simple
1
P37
Superfamily of P37
2H
structured_simple
1
P4
Superfamily of P4
complex unclassified
structured_complex
1
P5
Superfamily of P5
3H
structured_simple
1
P6
Superfamily of P6
complex unclassified
structured_complex
1
P8
Superfamily of P8
2H
structured_simple
1
P9
Superfamily of P9
2H
structured_simple
1
pan
Superfamily of pan
2H
structured_simple
1
Parecho_CRE
Superfamily of Parecho_CRE
complex unclassified
structured_complex
1
PART1_1
Superfamily of PART1_1
3H
structured_simple
1
PART1_2
Superfamily of PART1_2
complex unclassified
structured_complex
1
PART1_3
Superfamily of PART1_3
3H
structured_simple
1
PCA3_2
Superfamily of PCA3_2
complex unclassified
structured_complex
1
PCGEM1
Superfamily of PCGEM1
multiple_domains
structured_complex
1
Pedo-repair
Superfamily of Pedo-repair
complex unclassified
structured_complex
1
PepN_thermometer
Superfamily of PepN_thermometer
2H
structured_simple
1
pfl
Superfamily of pfl
3WJ
structured_simple
1
Phage_pRNA
Superfamily of Phage_pRNA
complex unclassified
structured_complex
1
Phe_leader
Superfamily of Phe_leader
hairpin
structured_simple
1
PhotoRC-I
Superfamily of PhotoRC-I
2H
structured_simple
1
PhotoRC-II
Superfamily of PhotoRC-II
2H
structured_simple
1
PhrS
Superfamily of PhrS
complex unclassified
structured_complex
1
Pinc
Superfamily of Pinc
multiple_domains
structured_complex
1
PinT
Superfamily of PinT
2H
structured_simple
1
PISRT1
Superfamily of PISRT1
2H
structured_simple
1
Pistol
Superfamily of Pistol
complex unclassified
structured_complex
1
PK-BYV
Superfamily of PK-BYV
pseudoknot_simple
structured_simple
1
PK-CuYV_BPYV
Superfamily of PK-CuYV_BPYV
complex unclassified
structured_complex
1
PK-HAV
Superfamily of PK-HAV
pseudoknot_simple
structured_simple
1
PK-IAV
Superfamily of PK-IAV
pseudoknot_simple
structured_simple
1
PK-PYVV
Superfamily of PK-PYVV
complex unclassified
structured_complex
1
PK-repBA
Superfamily of PK-repBA
hairpin
structured_simple
1
PK-repZ
Superfamily of PK-repZ
pseudoknot_simple
structured_simple
1
PK-SPCSV
Superfamily of PK-SPCSV
complex unclassified
structured_complex
1
PK1-TEV_CVMV
Superfamily of PK1-TEV_CVMV
pseudoknot_simple
structured_simple
1
Plasmid_R1162
Superfamily of Plasmid_R1162
2H
structured_simple
1
Plasmid_RNAIII
Superfamily of Plasmid_RNAIII
4H
structured_simple
1
pntA
Superfamily of pntA
2H
structured_simple
1
Polynucleobacter-1
Superfamily of Polynucleobacter-1
complex unclassified
structured_complex
1
Pospi_RY
Superfamily of Pospi_RY
hairpin
structured_simple
1
potC
Superfamily of potC
hairpin
structured_simple
1
Pox_AX_element
Superfamily of Pox_AX_element
2H
structured_simple
1
PreQ1
Superfamily of PreQ1
hairpin
structured_simple
1
preQ1-II
Superfamily of preQ1-II
3H
structured_simple
1
PreQ1-III
Superfamily of PreQ1-III
3WJ
structured_simple
1
PrfA
Superfamily of PrfA
hairpin
structured_simple
1
Prion_pknot
Superfamily of Prion_pknot
hairpin
structured_simple
1
pRNA
Superfamily of pRNA
hairpin
structured_simple
1
PrrF
Superfamily of PrrF
4H
structured_simple
1
psaA
Superfamily of psaA
complex unclassified
structured_complex
1
psbNH
Superfamily of psbNH
hairpin
structured_simple
1
Pseudomon-1
Superfamily of Pseudomon-1
2H
structured_simple
1
Pseudomon-groES
Superfamily of Pseudomon-groES
complex unclassified
structured_complex
1
Pseudomon-Rho
Superfamily of Pseudomon-Rho
2H
structured_simple
1
psm_mec_RNA
Superfamily of psm_mec_RNA
2H
structured_simple
1
psRNA14
Superfamily of psRNA14
3WJ
structured_simple
1
psRNA2
Superfamily of psRNA2
complex unclassified
structured_complex
1
psRNA6
Superfamily of psRNA6
complex unclassified
structured_complex
1
PsrR1
Superfamily of PsrR1
hairpin
structured_simple
1
PtaRNA1
Superfamily of PtaRNA1
2H
structured_simple
1
purD
Superfamily of purD
2H
structured_simple
1
Purine
Superfamily of Purine
3WJ
structured_simple
1
PutA_thermometer
Superfamily of PutA_thermometer
3H
structured_simple
1
PVT1_1
Superfamily of PVT1_1
complex unclassified
structured_complex
1
PVT1_2
Superfamily of PVT1_2
complex unclassified
structured_complex
1
PVT1_3
Superfamily of PVT1_3
3H
structured_simple
1
PVT1_4
Superfamily of PVT1_4
complex unclassified
structured_complex
1
PVT1_5
Superfamily of PVT1_5
2H
structured_simple
1
PVT1_6
Superfamily of PVT1_6
3WJ
structured_simple
1
PVT1_7
Superfamily of PVT1_7
3H
structured_simple
1
PVX_3
Superfamily of PVX_3
2H
structured_simple
1
Pxr
Superfamily of Pxr
3H
structured_simple
1
PYLIS_1
Superfamily of PYLIS_1
hairpin
structured_simple
1
PYLIS_2
Superfamily of PYLIS_2
2H
structured_simple
1
PYLIS_3
Superfamily of PYLIS_3
4H
structured_simple
1
PYLIS_4
Superfamily of PYLIS_4
2H
structured_simple
1
PYLIS_5
Superfamily of PYLIS_5
2H
structured_simple
1
PYLIS_6
Superfamily of PYLIS_6
hairpin
structured_simple
1
PyrC_leader
Superfamily of PyrC_leader
hairpin
structured_simple
1
PyrD_leader
Superfamily of PyrD_leader
hairpin
structured_simple
1
PyrG_leader
Superfamily of PyrG_leader
hairpin
structured_simple
1
Pyrobac-1
Superfamily of Pyrobac-1
hairpin
structured_simple
1
PyrR
Superfamily of PyrR
3H
structured_simple
1
Qrr
Superfamily of Qrr
3H
structured_simple
1
R2_retro_el
Superfamily of R2_retro_el
3WJ
structured_simple
1
radC
Superfamily of radC
4H
structured_simple
1
RAGATH-13
Superfamily of RAGATH-13
3WJ
structured_simple
1
RAGATH-5
Superfamily of RAGATH-5
pseudoknot_simple
structured_simple
1
RAGATH-6
Superfamily of RAGATH-6
complex unclassified
structured_complex
1
RAGATH-8
Superfamily of RAGATH-8
complex unclassified
structured_complex
1
RalA
Superfamily of RalA
complex unclassified
structured_complex
1
RatA
Superfamily of RatA
2H
structured_simple
1
RCNMV_5UTR
Superfamily of RCNMV_5UTR
4H
structured_simple
1
RCNMV_TE_DR1
Superfamily of RCNMV_TE_DR1
complex unclassified
structured_complex
1
RcsR1
Superfamily of RcsR1
3H
structured_simple
1
rdlD
Superfamily of rdlD
hairpin
structured_simple
1
REN-SRE
Superfamily of REN-SRE
hairpin
structured_simple
1
Retro_dr1
Superfamily of Retro_dr1
2H
structured_simple
1
Rev11
Superfamily of Rev11
complex unclassified
structured_complex
1
Rev13
Superfamily of Rev13
complex unclassified
structured_complex
1
Rev24
Superfamily of Rev24
complex unclassified
structured_complex
1
Rev39_5p_UTR
Superfamily of Rev39_5p_UTR
complex unclassified
structured_complex
1
Rev41
Superfamily of Rev41
complex unclassified
structured_complex
1
Rev42_5p_UTR
Superfamily of Rev42_5p_UTR
complex unclassified
structured_complex
1
Rev44
Superfamily of Rev44
complex unclassified
structured_complex
1
Rev72
Superfamily of Rev72
complex unclassified
structured_complex
1
RF_site1
Superfamily of RF_site1
hairpin
structured_simple
1
RF_site2
Superfamily of RF_site2
pseudoknot_simple
structured_simple
1
RF_site3
Superfamily of RF_site3
pseudoknot_simple
structured_simple
1
RF_site4
Superfamily of RF_site4
pseudoknot_simple
structured_simple
1
RF_site5
Superfamily of RF_site5
pseudoknot_simple
structured_simple
1
RF_site6
Superfamily of RF_site6
pseudoknot_simple
structured_simple
1
RF_site8
Superfamily of RF_site8
pseudoknot_simple
structured_simple
1
RF_site9
Superfamily of RF_site9
pseudoknot_simple
structured_simple
1
RFPL3-AS1_1
Superfamily of RFPL3-AS1_1
3WJ
structured_simple
1
RFPL3-AS1_2
Superfamily of RFPL3-AS1_2
2H
structured_simple
1
Rhino_CRE
Superfamily of Rhino_CRE
hairpin
structured_simple
1
Rhizobiales-2
Superfamily of Rhizobiales-2
3H
structured_simple
1
RhlA_thermometer
Superfamily of RhlA_thermometer
3WJ
structured_simple
1
rhtB
Superfamily of rhtB
hairpin
structured_simple
1
Ricks_sRNA10
Superfamily of Ricks_sRNA10
complex unclassified
structured_complex
1
rimP
Superfamily of rimP
2H
structured_simple
1
rivX
Superfamily of rivX
complex unclassified
structured_complex
1
rli22
Superfamily of rli22
2H
structured_simple
1
rli23
Superfamily of rli23
3WJ
structured_simple
1
rli24
Superfamily of rli24
complex unclassified
structured_complex
1
rli26
Superfamily of rli26
complex unclassified
structured_complex
1
rli27
Superfamily of rli27
3WJ
structured_simple
1
rli28
Superfamily of rli28
3WJ
structured_simple
1
rli31
Superfamily of rli31
hairpin
structured_simple
1
rli32
Superfamily of rli32
complex unclassified
structured_complex
1
rli33
Superfamily of rli33
complex unclassified
structured_complex
1
rli34
Superfamily of rli34
2H
structured_simple
1
rli36
Superfamily of rli36
2H
structured_simple
1
rli37
Superfamily of rli37
complex unclassified
structured_complex
1
rli38
Superfamily of rli38
3WJ
structured_simple
1
rli40
Superfamily of rli40
complex unclassified
structured_complex
1
rli41
Superfamily of rli41
complex unclassified
structured_complex
1
rli42
Superfamily of rli42
complex unclassified
structured_complex
1
rli43
Superfamily of rli43
complex unclassified
structured_complex
1
rli45
Superfamily of rli45
3WJ
structured_simple
1
rli47
Superfamily of rli47
complex unclassified
structured_complex
1
rli48
Superfamily of rli48
3WJ
structured_simple
1
rli49
Superfamily of rli49
3WJ
structured_simple
1
rli51
Superfamily of rli51
3WJ
structured_simple
1
rli52
Superfamily of rli52
3H
structured_simple
1
rli53
Superfamily of rli53
3WJ
structured_simple
1
rli54
Superfamily of rli54
complex unclassified
structured_complex
1
rli56
Superfamily of rli56
3WJ
structured_simple
1
rli59
Superfamily of rli59
3WJ
structured_simple
1
rli60
Superfamily of rli60
3WJ
structured_simple
1
rli61
Superfamily of rli61
2H
structured_simple
1
rli62
Superfamily of rli62
complex unclassified
structured_complex
1
rliA
Superfamily of rliA
complex unclassified
structured_complex
1
rliB
Superfamily of rliB
3WJ
structured_simple
1
rliD
Superfamily of rliD
complex unclassified
structured_complex
1
rliE
Superfamily of rliE
complex unclassified
structured_complex
1
rliF
Superfamily of rliF
complex unclassified
structured_complex
1
rliG
Superfamily of rliG
complex unclassified
structured_complex
1
rliH
Superfamily of rliH
complex unclassified
structured_complex
1
rliI
Superfamily of rliI
complex unclassified
structured_complex
1
RmaA
Superfamily of RmaA
2H
structured_simple
1
rmf
Superfamily of rmf
4H
structured_simple
1
RMST_1
Superfamily of RMST_1
hairpin
structured_simple
1
RMST_10
Superfamily of RMST_10
3H
structured_simple
1
RMST_2
Superfamily of RMST_2
complex unclassified
structured_complex
1
RMST_3
Superfamily of RMST_3
hairpin
structured_simple
1
RMST_4
Superfamily of RMST_4
2H
structured_simple
1
RMST_5
Superfamily of RMST_5
4H
structured_simple
1
RMST_6
Superfamily of RMST_6
complex unclassified
structured_complex
1
RMST_7
Superfamily of RMST_7
complex unclassified
structured_complex
1
RMST_8
Superfamily of RMST_8
3H
structured_simple
1
RMST_9
Superfamily of RMST_9
multiple_domains
structured_complex
1
RNA-OUT
Superfamily of RNA-OUT
hairpin
structured_simple
1
RnaG
Superfamily of RnaG
4WJ
structured_simple
1
RNAI
Superfamily of RNAI
3H
structured_simple
1
RNAIII
Superfamily of RNAIII
complex unclassified
structured_complex
1
RNaseP
Superfamily of RNaseP
RNaseP
structured_complex
7
rncO
Superfamily of rncO
3H
structured_simple
1
rne-II
Superfamily of rne-II
complex unclassified
structured_complex
1
rne5
Superfamily of rne5
complex unclassified
structured_complex
1
rnk_leader
Superfamily of rnk_leader
2H
structured_simple
1
rnk_pseudo
Superfamily of rnk_pseudo
2H
structured_simple
1
ROSE
Superfamily of ROSE
3H
structured_simple
1
ROSE_2
Superfamily of ROSE_2
2H
structured_simple
1
ROSE_3
Superfamily of ROSE_3
2H
structured_simple
1
Rota_CRE
Superfamily of Rota_CRE
hairpin
structured_simple
1
rox1
Superfamily of rox1
hairpin
structured_simple
1
rox2
Superfamily of rox2
hairpin
structured_simple
1
RprA
Superfamily of RprA
4H
structured_simple
1
rpsB
Superfamily of rpsB
3WJ
structured_simple
1
rpsL_psuedo
Superfamily of rpsL_psuedo
4H
structured_simple
1
rpsL_ricks
Superfamily of rpsL_ricks
3H
structured_simple
1
RRE
Superfamily of RRE
complex unclassified
structured_complex
1
RsaA
Superfamily of RsaA
3H
structured_simple
1
RsaB
Superfamily of RsaB
3H
structured_simple
1
RsaC
Superfamily of RsaC
complex unclassified
structured_complex
1
RsaD
Superfamily of RsaD
4H
structured_simple
1
RsaE
Superfamily of RsaE
3H
structured_simple
1
RsaF
Superfamily of RsaF
3H
structured_simple
1
RsaH
Superfamily of RsaH
complex unclassified
structured_complex
1
RsaJ
Superfamily of RsaJ
complex unclassified
structured_complex
1
RsaOG
Superfamily of RsaOG
complex unclassified
structured_complex
1
rseX
Superfamily of rseX
2H
structured_simple
1
rspL
Superfamily of rspL
3WJ
structured_simple
1
RSV_PBS
Superfamily of RSV_PBS
hairpin
structured_simple
1
RSV_RNA
Superfamily of RSV_RNA
complex unclassified
structured_complex
1
RtT
Superfamily of RtT
3WJ
structured_simple
1
Rubella_3
Superfamily of Rubella_3
2H
structured_simple
1
RUF1
Superfamily of RUF1
complex unclassified
structured_complex
1
RUF2
Superfamily of RUF2
2H
structured_simple
1
RUF20
Superfamily of RUF20
complex unclassified
structured_complex
1
RUF21
Superfamily of RUF21
complex unclassified
structured_complex
1
RUF3
Superfamily of RUF3
3WJ
structured_simple
1
RUF4
Superfamily of RUF4
complex unclassified
structured_complex
1
RUF6-5
Superfamily of RUF6-5
3WJ
structured_simple
1
RybB
Superfamily of RybB
hairpin
structured_simple
1
rydB
Superfamily of rydB
3WJ
structured_simple
1
RydC
Superfamily of RydC
pseudoknot_simple
structured_simple
1
RyeA-RyeB
Superfamily of RyeA-RyeB
3H
structured_simple
2
ryfA
Superfamily of ryfA
complex unclassified
structured_complex
1
RyhB
Superfamily of RyhB
2H
structured_simple
1
S-element
Superfamily of S-element
hairpin
structured_simple
1
S15
Superfamily of S15
2H
structured_simple
1
s2m
Superfamily of s2m
hairpin
structured_simple
1
sagA
Superfamily of sagA
complex unclassified
structured_complex
1
SAH_riboswitch
Superfamily of SAH_riboswitch
hairpin
structured_simple
1
SAM
Superfamily of SAM
3WJ
structured_simple
3
SAM-Chlorobi
Superfamily of SAM-Chlorobi
2H
structured_simple
1
SAM-II_long_loops
Superfamily of SAM-II_long_loops
pseudoknot_simple
structured_simple
1
SAM-SAH
Superfamily of SAM-SAH
hairpin
structured_simple
1
SAM_alpha
Superfamily of SAM_alpha
hairpin
structured_simple
1
SAM_V
Superfamily of SAM_V
hairpin
structured_simple
1
sar
Superfamily of sar
2H
structured_simple
1
SAR11_0636
Superfamily of SAR11_0636
3WJ
structured_simple
1
satBaMV_CRE
Superfamily of satBaMV_CRE
4WJ
structured_simple
1
sau-13
Superfamily of sau-13
3WJ
structured_simple
1
sau-19
Superfamily of sau-19
hairpin
structured_simple
1
sau-27
Superfamily of sau-27
2H
structured_simple
1
sau-30
Superfamily of sau-30
hairpin
structured_simple
1
sau-31
Superfamily of sau-31
hairpin
structured_simple
1
sau-41
Superfamily of sau-41
3WJ
structured_simple
1
sau-53
Superfamily of sau-53
complex unclassified
structured_complex
1
sau-59
Superfamily of sau-59
3WJ
structured_simple
1
sau-5949
Superfamily of sau-5949
hairpin
structured_simple
1
sau-5971
Superfamily of sau-5971
3H
structured_simple
1
sau-6072
Superfamily of sau-6072
2H
structured_simple
1
sau-63
Superfamily of sau-63
4H
structured_simple
1
sau-66
Superfamily of sau-66
3WJ
structured_simple
1
sbcD
Superfamily of sbcD
complex unclassified
structured_complex
1
sbrA
Superfamily of sbrA
2H
structured_simple
1
SBRMV1_UPD-PKd
Superfamily of SBRMV1_UPD-PKd
pseudoknot_simple
structured_simple
1
SBRMV1_UPD-PKf
Superfamily of SBRMV1_UPD-PKf
pseudoknot_simple
structured_simple
1
SBWMV1_UPD-PKb
Superfamily of SBWMV1_UPD-PKb
pseudoknot_simple
structured_simple
1
SBWMV1_UPD-PKe
Superfamily of SBWMV1_UPD-PKe
pseudoknot_simple
structured_simple
1
SBWMV1_UPD-PKh
Superfamily of SBWMV1_UPD-PKh
pseudoknot_simple
structured_simple
1
SBWMV2_UPD-PKb
Superfamily of SBWMV2_UPD-PKb
pseudoknot_simple
structured_simple
1
SBWMV2_UPD-PKk
Superfamily of SBWMV2_UPD-PKk
pseudoknot_simple
structured_simple
1
SBWMV2_UPD-PKl
Superfamily of SBWMV2_UPD-PKl
pseudoknot_simple
structured_simple
1
scr4677
Superfamily of scr4677
complex unclassified
structured_complex
1
scr5239
Superfamily of scr5239
complex unclassified
structured_complex
1
SECIS_1
Superfamily of SECIS_1
hairpin
structured_simple
1
SECIS_2
Superfamily of SECIS_2
hairpin
structured_simple
1
SECIS_3
Superfamily of SECIS_3
hairpin
structured_simple
1
SECIS_4
Superfamily of SECIS_4
hairpin
structured_simple
1
SECIS_5
Superfamily of SECIS_5
hairpin
structured_simple
1
serC
Superfamily of serC
2H
structured_simple
1
Sernc350
Superfamily of Sernc350
complex unclassified
structured_complex
1
Sernc389
Superfamily of Sernc389
complex unclassified
structured_complex
1
SgrS
Superfamily of SgrS
complex unclassified
structured_complex
1
shuA_thermo
Superfamily of shuA_thermo
hairpin
structured_simple
1
SIB_RNA
Superfamily of SIB_RNA
4WJ
structured_simple
1
Six3os1_1
Superfamily of Six3os1_1
3WJ
structured_simple
1
Six3os1_2
Superfamily of Six3os1_2
3WJ
structured_simple
1
Six3os1_3
Superfamily of Six3os1_3
2H
structured_simple
1
Six3os1_4
Superfamily of Six3os1_4
multiple_domains
structured_complex
1
Six3os1_5
Superfamily of Six3os1_5
complex unclassified
structured_complex
1
Six3os1_6
Superfamily of Six3os1_6
3WJ
structured_simple
1
Six3os1_7
Superfamily of Six3os1_7
complex unclassified
structured_complex
1
SL
Superfamily of SL
3H
structured_simple
2
SMAD5-AS1_1
Superfamily of SMAD5-AS1_1
complex unclassified
structured_complex
1
SMAD5-AS1_2
Superfamily of SMAD5-AS1_2
complex unclassified
structured_complex
1
SMAD5-AS1_3
Superfamily of SMAD5-AS1_3
3WJ
structured_simple
1
SMAD5-AS1_4
Superfamily of SMAD5-AS1_4
4WJ
structured_simple
1
SMCR2_1
Superfamily of SMCR2_1
complex unclassified
structured_complex
1
SMCR2_2
Superfamily of SMCR2_2
complex unclassified
structured_complex
1
SMK_box_riboswitch
Superfamily of SMK_box_riboswitch
3WJ
structured_simple
1
SmY
Superfamily of SmY
2H
structured_simple
1
snaR-A
Superfamily of snaR-A
hairpin
structured_simple
1
sobemo_FSE
Superfamily of sobemo_FSE
hairpin
structured_simple
1
SodB_thermometer
Superfamily of SodB_thermometer
2H
structured_simple
1
SodC_thermometer
Superfamily of SodC_thermometer
3WJ
structured_simple
1
sok
Superfamily of sok
2H
structured_simple
1
SorY
Superfamily of SorY
3H
structured_simple
1
sot0042
Superfamily of sot0042
complex unclassified
structured_complex
1
sot2652
Superfamily of sot2652
complex unclassified
structured_complex
1
SOX2OT_exon1
Superfamily of SOX2OT_exon1
complex unclassified
structured_complex
1
SOX2OT_exon2
Superfamily of SOX2OT_exon2
2H
structured_simple
1
SOX2OT_exon3
Superfamily of SOX2OT_exon3
complex unclassified
structured_complex
1
SOX2OT_exon4
Superfamily of SOX2OT_exon4
4H
structured_simple
1
Spd-sr07
Superfamily of Spd-sr07
hairpin
structured_simple
1
Spd-sr37
Superfamily of Spd-sr37
hairpin
structured_simple
1
speF
Superfamily of speF
complex unclassified
structured_complex
1
SpF01_sRNA
Superfamily of SpF01_sRNA
hairpin
structured_simple
1
SpF03_sRNA
Superfamily of SpF03_sRNA
3WJ
structured_simple
1
SpF10_sRNA
Superfamily of SpF10_sRNA
3WJ
structured_simple
1
SpF11_sRNA
Superfamily of SpF11_sRNA
2H
structured_simple
1
SpF14_sRNA
Superfamily of SpF14_sRNA
3WJ
structured_simple
1
SpF19_sRNA
Superfamily of SpF19_sRNA
3WJ
structured_simple
1
SpF22_sRNA
Superfamily of SpF22_sRNA
3WJ
structured_simple
1
SpF25_sRNA
Superfamily of SpF25_sRNA
2H
structured_simple
1
SpF36_sRNA
Superfamily of SpF36_sRNA
hairpin
structured_simple
1
SpF39_sRNA
Superfamily of SpF39_sRNA
2H
structured_simple
1
SpF41_sRNA
Superfamily of SpF41_sRNA
3WJ
structured_simple
1
SpF43_sRNA
Superfamily of SpF43_sRNA
hairpin
structured_simple
1
SpF44_sRNA
Superfamily of SpF44_sRNA
3WJ
structured_simple
1
SpF51_sRNA
Superfamily of SpF51_sRNA
2H
structured_simple
1
SpF56_sRNA
Superfamily of SpF56_sRNA
hairpin
structured_simple
1
SpF59_sRNA
Superfamily of SpF59_sRNA
4WJ
structured_simple
1
SpF61_sRNA
Superfamily of SpF61_sRNA
hairpin
structured_simple
1
SpF66_sRNA
Superfamily of SpF66_sRNA
complex unclassified
structured_complex
1
Sphinx_1
Superfamily of Sphinx_1
complex unclassified
structured_complex
1
Sphinx_2
Superfamily of Sphinx_2
multiple_domains
structured_complex
1
Spi-1
Superfamily of Spi-1
complex unclassified
structured_complex
1
Spot_42
Superfamily of Spot_42
3H
structured_simple
1
SpR08_sRNA
Superfamily of SpR08_sRNA
2H
structured_simple
1
SpR10_sRNA
Superfamily of SpR10_sRNA
hairpin
structured_simple
1
SpR14_sRNA
Superfamily of SpR14_sRNA
hairpin
structured_simple
1
SpR18_sRNA
Superfamily of SpR18_sRNA
3WJ
structured_simple
1
SpR19_sRNA
Superfamily of SpR19_sRNA
3WJ
structured_simple
1
SpR20_sRNA
Superfamily of SpR20_sRNA
2H
structured_simple
1
SprD
Superfamily of SprD
4H
structured_simple
1
SprX
Superfamily of SprX
complex unclassified
structured_complex
1
SPRY4-IT1_1
Superfamily of SPRY4-IT1_1
3WJ
structured_simple
1
SPRY4-IT1_2
Superfamily of SPRY4-IT1_2
complex unclassified
structured_complex
1
Spy1186876
Superfamily of Spy1186876
4H
structured_simple
1
Spy1786666
Superfamily of Spy1786666
2H
structured_simple
1
Spy392987
Superfamily of Spy392987
hairpin
structured_simple
1
Spy490380c
Superfamily of Spy490380c
3H
structured_simple
1
Spy490483c
Superfamily of Spy490483c
2H
structured_simple
1
Spy491311c
Superfamily of Spy491311c
3WJ
structured_simple
1
Spy491738
Superfamily of Spy491738
3H
structured_simple
1
Spy779816
Superfamily of Spy779816
2H
structured_simple
1
sR035
Superfamily of sR035
complex unclassified
structured_complex
1
sR084
Superfamily of sR084
2H
structured_simple
1
SR1
Superfamily of SR1
3H
structured_simple
1
sraA
Superfamily of sraA
2H
structured_simple
1
SraB
Superfamily of SraB
4H
structured_simple
1
SraG
Superfamily of SraG
3H
structured_simple
1
sraL
Superfamily of sraL
complex unclassified
structured_complex
1
srg1
Superfamily of srg1
complex unclassified
structured_complex
1
sRNA-Xcc1
Superfamily of sRNA-Xcc1
3WJ
structured_simple
1
sroB
Superfamily of sroB
3H
structured_simple
1
sroC
Superfamily of sroC
3WJ
structured_simple
1
sroD
Superfamily of sroD
2H
structured_simple
1
sroE
Superfamily of sroE
2H
structured_simple
1
sroH
Superfamily of sroH
hairpin
structured_simple
1
SRP
Superfamily of SRP
SRP
structured_complex
8
SscA
Superfamily of SscA
hairpin
structured_simple
1
Ssr1
Superfamily of Ssr1
complex unclassified
structured_complex
1
SSRC10
Superfamily of SSRC10
3H
structured_simple
1
SSRC30
Superfamily of SSRC30
complex unclassified
structured_complex
1
SSRC34_1
Superfamily of SSRC34_1
2H
structured_simple
1
SSRC34_2
Superfamily of SSRC34_2
2H
structured_simple
1
SSRC38
Superfamily of SSRC38
complex unclassified
structured_complex
1
SSRC41
Superfamily of SSRC41
2H
structured_simple
1
SSRC8_1
Superfamily of SSRC8_1
3WJ
structured_simple
1
SSRC8_2
Superfamily of SSRC8_2
complex unclassified
structured_complex
1
SSU_rRNA
Superfamily of SSU_rRNA
rRNA
structured_complex
5
ST7-AS1_1
Superfamily of ST7-AS1_1
hairpin
structured_simple
1
ST7-AS1_2
Superfamily of ST7-AS1_2
3WJ
structured_simple
1
ST7-AS2_1
Superfamily of ST7-AS2_1
hairpin
structured_simple
1
ST7-AS2_2
Superfamily of ST7-AS2_2
2H
structured_simple
1
ST7-OT3_1
Superfamily of ST7-OT3_1
hairpin
structured_simple
1
ST7-OT3_2
Superfamily of ST7-OT3_2
2H
structured_simple
1
ST7-OT3_3
Superfamily of ST7-OT3_3
hairpin
structured_simple
1
ST7-OT3_4
Superfamily of ST7-OT3_4
hairpin
structured_simple
1
ST7-OT4_1
Superfamily of ST7-OT4_1
complex unclassified
structured_complex
1
ST7-OT4_2
Superfamily of ST7-OT4_2
3WJ
structured_simple
1
ST7-OT4_3
Superfamily of ST7-OT4_3
multiple_domains
structured_complex
1
ST7-OT4_4
Superfamily of ST7-OT4_4
3WJ
structured_simple
1
STAXI
Superfamily of STAXI
4H
structured_simple
1
STnc100
Superfamily of STnc100
complex unclassified
structured_complex
1
STnc130
Superfamily of STnc130
2H
structured_simple
1
STnc150
Superfamily of STnc150
3H
structured_simple
1
STnc170
Superfamily of STnc170
complex unclassified
structured_complex
1
STnc180
Superfamily of STnc180
4H
structured_simple
1
STnc210
Superfamily of STnc210
3WJ
structured_simple
1
STnc220
Superfamily of STnc220
3WJ
structured_simple
1
STnc230
Superfamily of STnc230
hairpin
structured_simple
1
STnc240
Superfamily of STnc240
2H
structured_simple
1
STnc250
Superfamily of STnc250
4H
structured_simple
1
STnc260
Superfamily of STnc260
3WJ
structured_simple
1
STnc280
Superfamily of STnc280
2H
structured_simple
1
STnc290
Superfamily of STnc290
2H
structured_simple
1
STnc30
Superfamily of STnc30
complex unclassified
structured_complex
1
STnc300
Superfamily of STnc300
4H
structured_simple
1
STnc310
Superfamily of STnc310
2H
structured_simple
1
STnc320
Superfamily of STnc320
hairpin
structured_simple
1
STnc340
Superfamily of STnc340
2H
structured_simple
1
STnc350
Superfamily of STnc350
2H
structured_simple
1
STnc361
Superfamily of STnc361
complex unclassified
structured_complex
1
STnc370
Superfamily of STnc370
2H
structured_simple
1
STnc380
Superfamily of STnc380
2H
structured_simple
1
STnc390
Superfamily of STnc390
2H
structured_simple
1
STnc40
Superfamily of STnc40
2H
structured_simple
1
STnc400
Superfamily of STnc400
2H
structured_simple
1
STnc410
Superfamily of STnc410
3H
structured_simple
1
STnc420
Superfamily of STnc420
hairpin
structured_simple
1
STnc430
Superfamily of STnc430
3H
structured_simple
1
STnc450
Superfamily of STnc450
2H
structured_simple
1
STnc460
Superfamily of STnc460
4H
structured_simple
1
STnc470
Superfamily of STnc470
complex unclassified
structured_complex
1
STnc480
Superfamily of STnc480
hairpin
structured_simple
1
STnc490
Superfamily of STnc490
3H
structured_simple
1
STnc50
Superfamily of STnc50
2H
structured_simple
1
STnc500
Superfamily of STnc500
complex unclassified
structured_complex
1
STnc510
Superfamily of STnc510
complex unclassified
structured_complex
1
STnc540
Superfamily of STnc540
3WJ
structured_simple
1
STnc550
Superfamily of STnc550
complex unclassified
structured_complex
1
STnc560
Superfamily of STnc560
4H
structured_simple
1
STnc590
Superfamily of STnc590
complex unclassified
structured_complex
1
STnc630
Superfamily of STnc630
complex unclassified
structured_complex
1
STnc70
Superfamily of STnc70
3H
structured_simple
1
StyR-143
Superfamily of StyR-143
4H
structured_simple
1
StyR-3
Superfamily of StyR-3
3WJ
structured_simple
1
StyR-44
Superfamily of StyR-44
2H
structured_simple
1
sucA
Superfamily of sucA
4WJ
structured_simple
1
sucA-II
Superfamily of sucA-II
complex unclassified
structured_complex
1
sucC
Superfamily of sucC
hairpin
structured_simple
1
suhB
Superfamily of suhB
2H
structured_simple
2
SurA
Superfamily of SurA
complex unclassified
structured_complex
1
SurC
Superfamily of SurC
3WJ
structured_simple
1
sX11
Superfamily of sX11
complex unclassified
structured_complex
1
sX12
Superfamily of sX12
2H
structured_simple
1
sX13
Superfamily of sX13
4H
structured_simple
1
sX14
Superfamily of sX14
4H
structured_simple
1
sX15
Superfamily of sX15
3WJ
structured_simple
1
sX2
Superfamily of sX2
3WJ
structured_simple
1
sX4
Superfamily of sX4
complex unclassified
structured_complex
1
sX5
Superfamily of sX5
hairpin
structured_simple
1
sX6
Superfamily of sX6
complex unclassified
structured_complex
1
sX7
Superfamily of sX7
3H
structured_simple
1
sX8
Superfamily of sX8
2H
structured_simple
1
sX9
Superfamily of sX9
3H
structured_simple
1
sxy
Superfamily of sxy
3WJ
structured_simple
1
symR
Superfamily of symR
2H
structured_simple
1
T-box
Superfamily of T-box
complex unclassified
structured_complex
1
t44
Superfamily of t44
hairpin
structured_simple
1
TarA
Superfamily of TarA
3H
structured_simple
1
TarB
Superfamily of TarB
4H
structured_simple
1
TCL6_1
Superfamily of TCL6_1
2H
structured_simple
1
TCL6_2
Superfamily of TCL6_2
2H
structured_simple
1
TCL6_3
Superfamily of TCL6_3
multiple_domains
structured_complex
1
TCV_H4
Superfamily of TCV_H4
hairpin
structured_simple
1
TCV_H5
Superfamily of TCV_H5
hairpin
structured_simple
1
TCV_Pr
Superfamily of TCV_Pr
hairpin
structured_simple
1
Teg23
Superfamily of Teg23
complex unclassified
structured_complex
1
Teg49
Superfamily of Teg49
4WJ
structured_simple
1
Telomerase
Superfamily of Telomerase
telomerase
structured_complex
4
TeloSII_ncR30
Superfamily of TeloSII_ncR30
3WJ
structured_simple
1
TeloSII_ncR33
Superfamily of TeloSII_ncR33
4WJ
structured_simple
1
TeloSII_ncR40
Superfamily of TeloSII_ncR40
3WJ
structured_simple
1
TeloSII_ncR43
Superfamily of TeloSII_ncR43
complex unclassified
structured_complex
1
TeloSII_ncR45
Superfamily of TeloSII_ncR45
hairpin
structured_simple
1
TeloSII_ncR49
Superfamily of TeloSII_ncR49
hairpin
structured_simple
1
Termite-flg
Superfamily of Termite-flg
2H
structured_simple
1
Termite-leu
Superfamily of Termite-leu
2H
structured_simple
1
tfoR
Superfamily of tfoR
4H
structured_simple
1
THF
Superfamily of THF
complex unclassified
structured_complex
1
Thr_leader
Superfamily of Thr_leader
2H
structured_simple
1
TMV_UPD-PK1
Superfamily of TMV_UPD-PK1
pseudoknot_simple
structured_simple
1
TMV_UPD-PK3
Superfamily of TMV_UPD-PK3
pseudoknot_simple
structured_simple
1
Toga_5_CRE
Superfamily of Toga_5_CRE
complex unclassified
structured_complex
1
toga_FSE
Superfamily of toga_FSE
hairpin
structured_simple
1
Tombus_3_III
Superfamily of Tombus_3_III
2H
structured_simple
1
Tombus_3_IV
Superfamily of Tombus_3_IV
complex unclassified
structured_complex
1
Tombus_5
Superfamily of Tombus_5
complex unclassified
structured_complex
1
Tombus_IRE
Superfamily of Tombus_IRE
hairpin
structured_simple
1
ToxI
Superfamily of ToxI
hairpin
structured_simple
1
ToxT_thermometer
Superfamily of ToxT_thermometer
hairpin
structured_simple
1
tp2
Superfamily of tp2
hairpin
structured_simple
1
TP53TG1_1
Superfamily of TP53TG1_1
3WJ
structured_simple
1
TP53TG1_2
Superfamily of TP53TG1_2
4WJ
structured_simple
1
TP73-AS1
Superfamily of TP73-AS1
complex unclassified
structured_complex
1
tpke11
Superfamily of tpke11
2H
structured_simple
1
TPP
Superfamily of TPP
complex unclassified
structured_complex
1
tracrRNA
Superfamily of tracrRNA
hairpin
structured_simple
1
traJ-II
Superfamily of traJ-II
3WJ
structured_simple
1
Trans44_sRNA
Superfamily of Trans44_sRNA
4H
structured_simple
1
tRNA
Superfamily of tRNA
tRNA-like
structured_simple
15
Trp_leader
Superfamily of Trp_leader
2H
structured_simple
1
Trp_leader_2
Superfamily of Trp_leader_2
2H
structured_simple
1
TrxA_thermometer
Superfamily of TrxA_thermometer
2H
structured_simple
1
tsr1
Superfamily of tsr1
complex unclassified
structured_complex
1
tsr24
Superfamily of tsr24
complex unclassified
structured_complex
1
tsr25
Superfamily of tsr25
4H
structured_simple
1
tsr26
Superfamily of tsr26
4WJ
structured_simple
1
tsr31
Superfamily of tsr31
2H
structured_simple
1
tsr32
Superfamily of tsr32
4WJ
structured_simple
1
tsr33
Superfamily of tsr33
2H
structured_simple
1
TTC28-AS1_1
Superfamily of TTC28-AS1_1
complex unclassified
structured_complex
1
TTC28-AS1_2
Superfamily of TTC28-AS1_2
3WJ
structured_simple
1
TTC28-AS1_3
Superfamily of TTC28-AS1_3
3WJ
structured_simple
1
TTC28-AS1_4
Superfamily of TTC28-AS1_4
3WJ
structured_simple
1
TUG1_1
Superfamily of TUG1_1
hairpin
structured_simple
1
TUG1_2
Superfamily of TUG1_2
2H
structured_simple
1
TUG1_3
Superfamily of TUG1_3
complex unclassified
structured_complex
1
TUG1_4
Superfamily of TUG1_4
complex unclassified
structured_complex
1
TUSC7
Superfamily of TUSC7
4H
structured_simple
1
Twister-P5
Superfamily of Twister-P5
complex unclassified
structured_complex
1
Twister-sister
Superfamily of Twister-sister
4WJ
structured_simple
1
U1
Superfamily of U1
U1_snRNA
structured_complex
4
U1A_PIE
Superfamily of U1A_PIE
hairpin
structured_simple
1
U2
Superfamily of U2
Intron_gpII-like
structured_complex
3
U4
Superfamily of U4
U4_snRNA
structured_complex
3
U5
Superfamily of U5
Intron_gpII-like
structured_complex
1
U6
Superfamily of U6
Intron_gpII-like
structured_complex
3
U7
Superfamily of U7
hairpin
structured_simple
1
uc_338
Superfamily of uc_338
3WJ
structured_simple
1
UCA1
Superfamily of UCA1
3WJ
structured_simple
1
UnaL2
Superfamily of UnaL2
hairpin
structured_simple
1
UPD-PK2
Superfamily of UPD-PK2
pseudoknot_simple
structured_simple
1
UPD-PKc
Superfamily of UPD-PKc
pseudoknot_simple
structured_simple
1
UPD-PKib
Superfamily of UPD-PKib
pseudoknot_simple
structured_simple
1
UPSK
Superfamily of UPSK
pseudoknot_simple
structured_simple
1
UptR
Superfamily of UptR
3H
structured_simple
1
URE2_IRES
Superfamily of URE2_IRES
hairpin
structured_simple
1
VA
Superfamily of VA
3WJ
structured_simple
1
Va-907
Superfamily of Va-907
complex unclassified
structured_complex
1
Vault
Superfamily of Vault
hairpin
structured_simple
1
Vax2os1_1
Superfamily of Vax2os1_1
3WJ
structured_simple
1
Vax2os1_2
Superfamily of Vax2os1_2
complex unclassified
structured_complex
1
Vax2os1_3
Superfamily of Vax2os1_3
complex unclassified
structured_complex
1
veev_FSE
Superfamily of veev_FSE
hairpin
structured_simple
1
Vg1_ribozyme
Superfamily of Vg1_ribozyme
complex unclassified
structured_complex
1
Vimentin2
Superfamily of Vimentin2
3WJ
structured_simple
1
Virus_CITE_1
Superfamily of Virus_CITE_1
4WJ
structured_simple
1
Virus_CITE_2
Superfamily of Virus_CITE_2
3WJ
structured_simple
1
Virus_CITE_3
Superfamily of Virus_CITE_3
3WJ
structured_simple
1
Virus_CITE_4
Superfamily of Virus_CITE_4
3WJ
structured_simple
1
Virus_CITE_5
Superfamily of Virus_CITE_5
hairpin
structured_simple
1
Virus_CITE_6
Superfamily of Virus_CITE_6
3WJ
structured_simple
1
Virus_CITE_7
Superfamily of Virus_CITE_7
3WJ
structured_simple
1
Virus_CITE_8
Superfamily of Virus_CITE_8
3WJ
structured_simple
1
VIS1
Superfamily of VIS1
4H
structured_simple
1
VR-RNA
Superfamily of VR-RNA
complex unclassified
structured_complex
1
VrrA
Superfamily of VrrA
2H
structured_simple
1
wcaG
Superfamily of wcaG
complex unclassified
structured_complex
1
weev_FSE
Superfamily of weev_FSE
hairpin
structured_simple
1
whalefall-1
Superfamily of whalefall-1
2H
structured_simple
1
WLE3
Superfamily of WLE3
hairpin
structured_simple
1
WsnRNA46
Superfamily of WsnRNA46
hairpin
structured_simple
1
WsnRNA59
Superfamily of WsnRNA59
hairpin
structured_simple
1
WT1-AS_1
Superfamily of WT1-AS_1
3H
structured_simple
1
WT1-AS_2
Superfamily of WT1-AS_2
4WJ
structured_simple
1
WT1-AS_3
Superfamily of WT1-AS_3
complex unclassified
structured_complex
1
WT1-AS_4
Superfamily of WT1-AS_4
3WJ
structured_simple
1
WT1-AS_5
Superfamily of WT1-AS_5
hairpin
structured_simple
1
WT1-AS_6
Superfamily of WT1-AS_6
3WJ
structured_simple
1
WT1-AS_7
Superfamily of WT1-AS_7
complex unclassified
structured_complex
1
WT1-AS_8
Superfamily of WT1-AS_8
3H
structured_simple
1
XIST_A_REPEAT
Superfamily of XIST_A_REPEAT
2H
structured_simple
1
Xist_exon1
Superfamily of Xist_exon1
3H
structured_simple
1
Xist_exon4
Superfamily of Xist_exon4
hairpin
structured_simple
1
XIST_intron
Superfamily of XIST_intron
hairpin
structured_simple
1
Xoo1
Superfamily of Xoo1
complex unclassified
structured_complex
1
Xoo2
Superfamily of Xoo2
3H
structured_simple
1
Xoo5
Superfamily of Xoo5
3WJ
structured_simple
1
Xoo8
Superfamily of Xoo8
complex unclassified
structured_complex
1
Y_RNA
Superfamily of Y_RNA
hairpin
structured_simple
1
Yar_1
Superfamily of Yar_1
hairpin
structured_simple
1
Yar_2
Superfamily of Yar_2
2H
structured_simple
1
Yar_3
Superfamily of Yar_3
3WJ
structured_simple
1
ybhL
Superfamily of ybhL
hairpin
structured_simple
1
ydaO-yuaA
Superfamily of ydaO-yuaA
complex unclassified
structured_complex
1
YenS
Superfamily of YenS
complex unclassified
structured_complex
1
Yfr1
Superfamily of Yfr1
2H
structured_simple
1
Yfr10
Superfamily of Yfr10
2H
structured_simple
1
Yfr11
Superfamily of Yfr11
3WJ
structured_simple
1
Yfr13
Superfamily of Yfr13
4H
structured_simple
1
Yfr17
Superfamily of Yfr17
3WJ
structured_simple
1
Yfr19
Superfamily of Yfr19
2H
structured_simple
1
Yfr20
Superfamily of Yfr20
3H
structured_simple
1
Yfr21
Superfamily of Yfr21
complex unclassified
structured_complex
1
Yfr8
Superfamily of Yfr8
complex unclassified
structured_complex
1
YFV_3UTR
Superfamily of YFV_3UTR
complex unclassified
structured_complex
1
yjdF
Superfamily of yjdF
4WJ
structured_simple
1
ykkC-III
Superfamily of ykkC-III
2H
structured_simple
1
ykkC-yxkD
Superfamily of ykkC-yxkD
2H
structured_simple
1
ykoK
Superfamily of ykoK
complex unclassified
structured_complex
1
ylbH
Superfamily of ylbH
3H
structured_simple
1
YrlA
Superfamily of YrlA
4WJ
structured_simple
1
YrlB
Superfamily of YrlB
hairpin
structured_simple
1
Ysr141
Superfamily of Ysr141
complex unclassified
structured_complex
1
Ysr155(RyfD)
Superfamily of Ysr155(RyfD)
complex unclassified
structured_complex
1
Ysr190
Superfamily of Ysr190
2H
structured_simple
1
Ysr202
Superfamily of Ysr202
complex unclassified
structured_complex
1
Ysr209
Superfamily of Ysr209
hairpin
structured_simple
1
Ysr224
Superfamily of Ysr224
4WJ
structured_simple
1
Ysr35
Superfamily of Ysr35
complex unclassified
structured_complex
1
Ysr49
Superfamily of Ysr49
4H
structured_simple
1
yybP-ykoY
Superfamily of yybP-ykoY
3H
structured_simple
1
ZEB2_AS1_1
Superfamily of ZEB2_AS1_1
3H
structured_simple
1
ZEB2_AS1_2
Superfamily of ZEB2_AS1_2
2H
structured_simple
1
ZEB2_AS1_3
Superfamily of ZEB2_AS1_3
3WJ
structured_simple
1
ZEB2_AS1_4
Superfamily of ZEB2_AS1_4
2H
structured_simple
1
ZFAT-AS1_1
Superfamily of ZFAT-AS1_1
3WJ
structured_simple
1
ZFAT-AS1_2
Superfamily of ZFAT-AS1_2
4WJ
structured_simple
1
ZFAT-AS1_3
Superfamily of ZFAT-AS1_3
4WJ
structured_simple
1
ZNFX1-AS1_1
Superfamily of ZNFX1-AS1_1
multiple_domains
structured_complex
1
ZNFX1-AS1_2
Superfamily of ZNFX1-AS1_2
hairpin
structured_simple
1
ZNFX1-AS1_3
Superfamily of ZNFX1-AS1_3
hairpin
structured_simple
1
ZNRD1-AS1_1
Superfamily of ZNRD1-AS1_1
hairpin
structured_simple
1
ZNRD1-AS1_2
Superfamily of ZNRD1-AS1_2
4WJ
structured_simple
1
ZNRD1-AS1_3
Superfamily of ZNRD1-AS1_3
hairpin
structured_simple
1
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