Subfamily Intron_gpII-B_BactF
Download the aligments for this family. (.stk)
RNA Shape
Level1
((((((()()(())((()(((((()))()))))))))))((()))((()))(()(())))
Level2
((()()()(()(()())))()()(()()))
Consensus Secondary Structure representation
>predicted reference Intron_gpII-B_BactF
GUGCGCCAUGCCAAGCCUGCCUCUAUCUAGCGGGUGAAAGUCCCGCCCUGGUAAUUGCCGGUCGGCCAGGUAGCCGGCAAGCGGCACGUUGGGGUAACCCAACGUGUCGAAGCAUAGCGUAAGAAGCGGCUUCCUAACGGGCGAGCAAACCAGCGGGCCGUAACGUAAGUGAACCCCGACUCGGCCUCGUUAUUGUCAUUCAGCGGGAGCCGAGCCGGCGAUUUUAGGGCGAAGGCUGUACCCACGGGGAAGAAACAGGGGAAUGCACUAGCGUGGGACCCGCCGGGGUAGUGGGGACGGCACGUUGGAAAAGUAGGGGGAGGAACAUGGGAGGCCCUAUUGCCAGCGAUAUUGGAGGAAGGUCACCUAGGAUAUAACGCCAAAGGAGAAGAAAUGGACAGCCGGGCGUGUCGGGAGUCGGAGGGGCCCAUAGUACCGAUGAAGGUAAGGACAACAUAACCCCGGCGGAGGGAAGGGGCCCUACUUCAAUCAUGUUUACGCAUAAAGAAGGUAGAAGCUCUGGGAUGGCACAGCAGGAAGAUUAUCGGAAAGCCGUGUGCGGGAAAACCGCAUGCACGGUUUGAUGAGGGGGCGCUGGAAAGGUGGACCACGACGCCAGCGCUCGACCCUAGCCAGAUGAAGAGGGAACAAACUGAGAAAGCUAUGGUAAAGCUACCGAGGCCCGGCUCUACUCUAC
...(.(((((.....((..((.((...(.(((((.......)))))(((((..............))))).............(((((.((((....)))).)))))..........................................((((((.(((((.((....))....(((......((((((.............(((((.(((..((............).)...))).....(((((.........................)))))..)))))))))))...))).))))).))))))...)..)).))..))..)))))((..((...................................(......................)..................))..)).(.(((((((......((................................))....))))))).)..............(............((.............................)).....((((((((.((((.....))))...))))))))...)..........)....................................................................................................
