Subfamily Intron_gpI-IA3

Tertiary Structure
Consensus Secondary Structure

Download the aligments for this family. (.stk)

RNA Shape

Level1

()((()))((((()))))(())()()(())(())

Level2

()()()()()()()()

Consensus Secondary Structure representation

>predicted reference Intron_gpI-IA3

AUCAUAAGGUAAACAAUAAUUGCCUCCUUAUAUAGUAAUAUAAUGGAAAAAAUUGGCUCAUAUCGGUGAAACCCUUAAUUAUUUUUAAAAUAAUAUGGCAAUACCGAGGGAAGUUUUUUUUAAAAAAAACCCCGUAACGACUGAAUUCGAAAGAAGUCAGAUAUUUUUAAUUAUAAAAAUAUAAUACGCCGACUCUUAUAUUAUAAGAUGAAGGUAUAGUCUAUGCCCUUAAGAAAUUAAGGGUAAACAUGAGGGAGGUAG

........(...............).(.(.((((....))))).).................((((((....((.(..((.(......)..)).).))...))))))(((..((((((((())))))))))))............((......)).....(((((((((....)))))))))..........(((((((...)))))).)............((.((((((......)))))).....))...........