Family rli54

Download the aligments for this family. (.stk)

RNA Shape

Level1

((())((((()((()))))(()))))(((()(()))(((())))))(((()))())

Level2

(()((()())()))((()())())(()())

Consensus Secondary Structure representation

>predicted reference rli54 
GUAUUAAUAAAAUUCUUGUUUUUAAGUAAAACAGAAAUAACUUUUAAAUAAAAGGAAAGUUCCUGUUUUUUUAUGAAACAUUGUGAAAGAACGAAUGUUUUUUCACAAACUCUCUUAAAACCCAUGUUUUCAAUGAGGAUUUUGUGGUAAUAACUGGAGAGGCUACGUAAUUAGUUAAUAGGAAUUUAGAAAAAAGCUUCCGGAAUCUGCUUCUUUCUACAGAAUAACUUUUCUUUUUACUACGCUAUUAUAAUUAAUACACAAUCAGGAUGGCAGUUUCAAAAGAACCCAUUUAGAUGGGUAAAUGACCGGACGAGCGUUACAUAAAACGCAUACCUAACUAAUGAAGAAUUUGAAACUGUACAAUGUGAAUGACGAAAGGGUGGAUACGAAAUGGCUUCUAAAACAAAGAAGGCUAUUAUCGACGUAAAGAAACAAUUUGAGGCUGUUCAUAAACAAUUUGAAUUAGUUCAAAUUUUGAAUGAAAAAGGAGAAAUCGUUAAUCCAGAUUUAAUGCCGGAUUUAACU
((((((((....((((.(((((.....))))))))).............((((((((((((.(((..(((((((..(((.((((((((((((....)))))))))))).((((((......(((((..(((.....)))...)))))........))))))............))).)))))))..((((((.((((...........)))).)))))))))...))))))))))))...............))))))))....(((((.(((((((((((((...((((((....))))))........((....(((((......)))))...))..............)))))))))))...((((....................(((((((((((((.......)))).)))))).))))))).......)).)))))(((..(((((..(.((((((((....)))))))).)..)))))...(((...........))).........)))..........