Family hilD_3p_UTR

Download the aligments for this family. (.stk)

RNA Shape

Level1

(((())))()(((((())))(()(()))()))(())

Level2

()()(()(()())())()

Consensus Secondary Structure representation

>predicted reference hilD_3p_UTR 
CAUUUUUUGCGUCUGUCACUUAAGUAAAGAUUUUUAUUAAAAUCUUAAUAAUUUAAAAUUCAGAACGCGCAUUAACACGCUAUAUCAGGAUGGGAGGCUACUCAAUAUCAUUGUUCUGUCCAGAAGACAGCUUACACUGAUAUCUGUGGCAAUUUAAAGUAAGGCUGAUUAUAUAACACGAUUUUUGUGAACUUGUCAUCGCUAUGAUGACUGGUAAAACGAUAUUGCCUUAUUCACACCGUAAGGAUCCGUCCAGAUGAAACUAUCUCCUUCCGGCCUUAGCCCUGUGGACUAAGGCCGGCAUUUUAUU
........(((((((....((((((...((((((....))))))......))))))....)))).)))((........))..((((.((((((...(((((...((((((.(((.(((((.....)))))...))).))))))..))))).......((((((((...........(((((...))))).(((.((((((.....)))))).)))...........))))))))....((....))..)))))).)))).............((((((((((((....)).)))))))))).........