Family beta_tmRNA

Download the aligments for this family. (.stk)

RNA Shape

Level1

(((((()())))))()[(])()

Level2

(()())()[(])()

Consensus Secondary Structure representation

>predicted reference beta_tmRNA 
ACACGCAAAUUGACUUGAAGCUGACGGCAGCGCGCGUAUAAUCUAGAGCAUGGUUGUAUUCCGGCAACCUGGAGGCGUUCUGGACGGGGGUUCGAUUCCCCCCACCUCCACCCAAGGGCAUUCCACGGAGAGUGUUUUGAUGGGGGUGUACUGGUUUCGACAGGGCGGGCAAAGGUGAGCAGGCAACCCGUCAGGCGACGGACGUUAAUAAUACAAAUCCAUAAAUGCCAACGAUGAGCAUUUCGCAAUGGCCGCCUAAAAACGGCUAGCUGGGGCUGCUGCUGCCUUGUUACCAAAGAGCAGCCGCCGGGGGCCUCGGGGCCCCCGGUCA
...................................................(((((....((.((.((((.....(((((((...(((((.......)))))(((((((................................)))))))............))))))).....))))..)).)))))))((((........))))....................................................................[[[[.((((((]]]]...........))))))..(((((((((....)))))))))...