Family RsaJ

Download the aligments for this family. (.stk)

RNA Shape

Level1

((())(((((((())()))(((()))))))))()

Level2

(()((()())()))()

Consensus Secondary Structure representation

>predicted reference RsaJ 
AUAACUAUAAAUUUUGGCAAAAUUUUGACCUUGCUAUUGAAAUGACCAAGGCUUCUUACGGAAUUCGGGCAGACAUAAACAGCGAUUCGCUAAAAUAUGUCAGUUAAAAUUAACAAUUGCAUUAUUCCUUAACAAAAAGACAUCCUAGCUCUACCACGUUGUGAAACAAUCCAUUAAUUGUAACACUACGUUGAGCGCCUUGUUCAUCAAUGCUAUAAUUAGUUACAUAAUAAAUUGAACAUCUAAAUACACCAAAUCCCCUCACUAUUGCCCUAGUGAGGGGAUUU
.((((((........(((((....))).))..((.(((((..(((.((((((.......(((((....(((((((((...((((...))))....)))))).((((....))))...)))...)))))...................((((....((((.(((..(((((......)))))..))).)))).)))))))))).))))))))))......))))))............................((((((((((((((......))))))))))))))