Family IsrM

Download the aligments for this family. (.stk)

RNA Shape

Level1

(((((()((())))(())()))(())))(())

Level2

(((()())()())())()

Consensus Secondary Structure representation

>predicted reference IsrM 
AGCUUCAUGCUUCUUUUUUAGAUAGUUUGUUGUUCGUGCCUAUCGUACACUUUGCGACUGUUCGUUUUGCAUCUAUUCCAAGCAUCAAUCAAUACAAUAAAUUUCAGCACCAUAAAGAUAAUAAUAAAAAUCAACAAGAUACGAAAACCCCUUCCAUAUCAACAUCAUCACCACCCUUUUUGCGCCUUCCCUUCCCCGCAAAAAAUAAAAAUCUCCAACAAACUCAACCAUCUCCCCCACCAAUUACAAGGACGCCAGCCACUUUUUAGUUGUUUGAAGUUCAAUGAAGUCUACUAAGCCCGCACAGCACAAGCUCUGCGGGCUUUUUU
.((((((((((((......(((((((((((((...((((...(((((.....))))).((((.(((.(((...........)))..))).))))............))))...........................((((.(((......)))..))))................((((((((............))))))))...........))))))))).....)))).......((((((.((((..........)))).))))))...)))))...))))))).....(((((((((.(((....))).)))))))))....