International institute of molecular and cell biology in Warzawa

Family IRES_n-myc


Download the aligments for this family. (.stk)

RNA Shape

Level1
(()())(((()()()))())
Level2
(()())((()()())())

Consensus Secondary Structure representation

>predicted reference IRES_n-myc 
CUCUAAACGAGCUGGGUAGAUAGGGAGGGAUACUGAGAACUGCGUUGAAGUUGAGCAAGAGUUAGCAAAGUGCAAGCGUUCGCAGAAUGAUUGGGCAACCUGGUUAGACCGGGCCCCCAUUGCCUAUCCCCAGACUCUAGCGCAGAAUCGCCUCCCUAUCCCCAUCAGUCUGUUGGAGUGUUGGAGGUCGGCGCCGGCCCCCGCCUUCCGCGCCCCCCACGGGAAGGAAGCACCCCCGGUAUUAAAACGAACGGGGCGGAAAGAAGCCCUCAGUCGCCGGCCGGGAGGCGAGCCGAUGCCGAGCUGCUCCACGUCCACCAUG
......................(((..............(((((....................................))))).........................(((...............)))......................))).........................((((...((((.((((((...............((....)).........(((...)))..............((((................)))))))))).......))))..((...)).........)))).....





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