International institute of molecular and cell biology in Warzawa

Family IRES_Picorna_2


Download the aligments for this family. (.stk)

RNA Shape

Level1
()((()))(((((((()((())()())())))))))(((()))(()))(())
Level2
()()(()(()()())())(()())()

Consensus Secondary Structure representation

>predicted reference IRES_Picorna_2
ACGCAGGUUUCCCCAACUGACACAAACCGUGCAACUUGAAACUCCGCCUGGUCUUUCCAGGUCUAGAGGGGUGACACUUUGUACUGUGUUUGACUCCACGCUCGGUCCACUGGCGAGUGUUAGUAACAGCACUGUUGCUUCGUAGCGGAGCAUGAUGGCCGUGGGAACUCCUCCUUGGUAACAAGGACCCACGGGGCCAAAAGCCACGUCCUAACGGACCCAUCAUGUGUGCAACCCCAGCACGGCAACUUUACUGUGAAACCCACUUUAAGGUGACACUGAUACUGGUACUCAAACACUGGUGACAGGCUAAGGAUGCCCUUCAGGUACCCCGAGGUAACACGCGACACUCGGGAUCUGAGAAGGGGACUGGGGCUUCUUUAAAAGCGCCCAGUUUAAAAAGCUUCUAUGCCUGAAUAGGUGACCGGAGGCCGGCACCUUUCCUUUUACAACUACUGAUUU
.....((...))................((((((.......((((.(((((.....)))))......)))).......)))))).((((((((..(((...(((((.((((....((((......((((....((((((.((...))..((((((((((((((((.......(((((....))))).)))))))(((.....)))..((((....)))))))))))))((((.......))))))))))....))))......))))....))))..)))))...)))...))))))))......(((((........((((((((((...(((((.............))))).))))))..)))).((((((((..........)).))))))...............)))))...(((((.((((...)))))))))......................





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