Family IRES_HIF1

Download the aligments for this family. (.stk)

RNA Shape

Level1

()()()((()))((()))(())

Level2

()()()()()()

Consensus Secondary Structure representation

>predicted reference IRES_HIF1 
CUCGUCUGAGGGGACGCGAGGAUCGUCCUCGCCGCCGCUUCGGCCAGUGUGUCGGCCGGGCCUUGACAAGCUACCUGAGGAGGGUCUCGGAGCCGGACCUGGAGCCCAGCGAUUGCCGCCUGCUUCUCCCGCCUCUGGUCUCGGGAGGCCUCCCGCCUCGCACCCCCCCUCUGGACCUGCCUCCCUUCUCCUCCCGCGUGCGGAGGGAGCCAGCGCUUAGGCCCGAGCGAGCCUGGGGGCCGCCGGCCGUGAAGGCAUCGCGGGGACCGAUUCGCCAUG
(((.......)))..((((((.....)))))).(((......................)))....................(((.(.......................................(((((............))))))))).........................(((.((((....(((..........))).)))).))).........(((.(((...........)))))).................................