Family HTT-AS1_1

Download the aligments for this family. (.stk)

RNA Shape

Level1

((((((())(())())))))((())())

Level2

(()()())(()())

Consensus Secondary Structure representation

Comment:Consensus Secondary Structure predicted by PETfold

>predicted reference HTT-AS1_1 
GGUCUCUGCACUGGCCAGGCAUGCAGAACAUUCUGUUCAGUACCACUGGACAGAGGGCCCCAUCUAGAUGAGACAGAGCUGGUGGGGCAGGACAAGGACUCCUGGGAGCUGAAAUGGCCUGGCAGAUGCUUGGUGAGAGGGGGCUUCUUGAGACAGCACCAUUUCUGGGAAGAGAGUCACCUGGGAGGGGUGAGGCCAUGCUCCGGCUUGGAGGUGAAGGGAGGGGCCAC
...((((((((..(((((((.....(....(((((((((((...)))))))))).)((((((((.((...........))))))))))((((.......)))).....).......))))))).).)))........))))((((((((.......((((..(((((((..........)))))))..))))(((((.......)))))...........))))))))..