International institute of molecular and cell biology in Warzawa

Family HOTTIP_3


Download the aligments for this family. (.stk)

RNA Shape

Level1
((()))((()((((((())())(((((((((()))))))))))()(()))))))
Level2
()(()(((()())())()()))

Consensus Secondary Structure representation

>predicted reference HOTTIP_3 
UUUUGGGGCGGUGUUUACAGACUCUUCUUCUCUGCCUCCGCCCUGCUCUUGGCCGGGGCUUCGAGCCUCUUCUGUUUUCCAGCCAGACCCGGAAAAACGAAAACACAGCUCGGGGAGCCCCCACCAGCCGGCGCCUGUGCCAGCUCACCUCUGGCCAUGGCGCAGCUGCUGGUGCACACAGCGGCCAAGGCCAGCUCCACAUUCUUCCCUCCCCCUCCCACUUCACCGGAGACCGGAGCCCUGCGUGCAGAGGAAGGGCCUCAGCUCCACAGACUGCCAAAGUCGACUGGGUCCCUCCUCACCAAAAAUGGUGAGACAAGAUUUCAUCUUGUCCGCUGAGGAGCCACAAGCAG
....(((((((......(.((....))......)...)))))))((((((((.(((....)))((.((.((...........((......((....................((...))...............))..(((((.......)))))...))....((.((..(..........((((....(...(((.......(....((...((...........))......)).......)....)))...)))))....)..........).)...)).))(...)....((...((((....))))))...).).......))......)))))).)).........





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