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RNA shape search tool
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Genesilico.pl
Families
Family
Superfamily
Architecture
Class
Structure
23S-methyl
23S-methyl
2H
structured_simple
5_8S_rRNA
LSU_rRNA
rRNA
structured_complex
5S_rRNA
5S_rRNA
rRNA
structured_complex
5_ureB_sRNA
5_ureB_sRNA
complex unclassified
structured_complex
6C
6C
pseudoknot_simple
structured_simple
6S
6S
hairpin
structured_simple
6S-Flavo
6S-Flavo
hairpin
structured_simple
7SK
7SK
2H
structured_simple
Aar
Aar
complex unclassified
structured_complex
AbsR11
AbsR11
complex unclassified
structured_complex
AbsR25
AbsR25
2H
structured_simple
AbsR28
AbsR28
complex unclassified
structured_complex
ACA59
H/ACA-box
2H
structured_simple
ACA64
H/ACA-box
2H
structured_simple
ACAT
ACAT
3H
structured_simple
ACEA_U3
C/D-box
hairpin
structured_simple
Acido-1
Acido-1
2H
structured_simple
Acido-Lenti-1
Acido-Lenti-1
2H
structured_simple
Actino-pnp
Actino-pnp
hairpin
structured_simple
adapt33_1
adapt33_1
2H
structured_simple
adapt33_2
adapt33_2
hairpin
structured_simple
adapt33_3
adapt33_3
4WJ
structured_simple
adapt33_4
adapt33_4
hairpin
structured_simple
AdoCbl_riboswitch
Cobalamin
4WJ
structured_simple
AdoCbl-variant
Cobalamin
4WJ
structured_simple
AEV_CRE
AEV_CRE
hairpin
structured_simple
AfaR
AfaR
3WJ
structured_simple
Afu_182
Afu_182
2H
structured_simple
Afu_190
C/D-box
hairpin
structured_simple
Afu_191
C/D-box
hairpin
structured_simple
Afu_198
C/D-box
hairpin
structured_simple
Afu_199
C/D-box
hairpin
structured_simple
Afu_203
Afu_203
2H
structured_simple
Afu_254
Afu_254
2H
structured_simple
Afu_263
C/D-box
hairpin
structured_simple
Afu_264
C/D-box
hairpin
structured_simple
Afu_294
C/D-box
hairpin
structured_simple
Afu_298
C/D-box
hairpin
structured_simple
Afu_300
C/D-box
hairpin
structured_simple
Afu_304
C/D-box
hairpin
structured_simple
Afu_309
Afu_309
complex unclassified
structured_complex
Afu_328
C/D-box
hairpin
structured_simple
Afu_335
C/D-box
hairpin
structured_simple
Afu_455
C/D-box
hairpin
structured_simple
Afu_513
C/D-box
hairpin
structured_simple
Afu_514
C/D-box
hairpin
structured_simple
AgvB
AgvB
3H
structured_simple
AHBV_epsilon
Hepadnavirus_epsilon
hairpin
structured_simple
AilA_thermometer
AilA_thermometer
2H
structured_simple
Alfamo_CPB
Alfamo_CPB
complex unclassified
structured_complex
ALIL
ALIL
2H
structured_simple
Alpha_RBS
Alpha_RBS
complex unclassified
structured_complex
alpha_tmRNA
tRNA
tRNA-like
structured_simple
AMV_RNA1_SL
AMV_RNA1_SL
hairpin
structured_simple
AniS
AniS
2H
structured_simple
Anti-Q_RNA
Anti-Q_RNA
3WJ
structured_simple
Antizyme_FSE
Antizyme_FSE
pseudoknot_simple
structured_simple
ApoB_5_CRE
ApoB_5_CRE
complex unclassified
structured_complex
ar14
ar14
3H
structured_simple
ar15
suhB
2H
structured_simple
ar35
ar35
3H
structured_simple
ar45
ar45
4WJ
structured_simple
ar7
ar7
3H
structured_simple
ar9
ar9
complex unclassified
structured_complex
Archaea_SRP
SRP
SRP
structured_complex
ArcZ
ArcZ
2H
structured_simple
Arthropod_7SK
7SK
2H
structured_simple
AS1726
AS1726
2H
structured_simple
AS1890
AS1890
4WJ
structured_simple
asd
asd
complex unclassified
structured_complex
AsdA
AsdA
2H
structured_simple
ASdes
ASdes
3WJ
structured_simple
ASpks
ASpks
2H
structured_simple
AsrC
AsrC
complex unclassified
structured_complex
astro_FSE
astro_FSE
pseudoknot_simple
structured_simple
asX1
asX1
3WJ
structured_simple
asX2
asX2
2H
structured_simple
asX3
asX3
3WJ
structured_simple
asX4
asX4
3WJ
structured_simple
asX6
asX6
2H
structured_simple
AsxR
AsxR
2H
structured_simple
atoC
atoC
2H
structured_simple
ATPC
ATPC
3WJ
structured_simple
Atu_At1
Atu_At1
complex unclassified
structured_complex
Atu_C10
Atu_C10
2H
structured_simple
Atu_C3
Atu_C3
complex unclassified
structured_complex
Atu_C4
Atu_C4
2H
structured_simple
Atu_C6
Atu_C6
2H
structured_simple
Atu_C7
Atu_C7
2H
structured_simple
Atu_C8
Atu_C8
3WJ
structured_simple
Atu_C9
Atu_C9
2H
structured_simple
Atu_L1
Atu_L1
complex unclassified
structured_complex
Atu_L6
Atu_L6
3H
structured_simple
Atu_Ti1
Atu_Ti1
3H
structured_simple
Atu_Ti3
Atu_Ti3
hairpin
structured_simple
Atu_Ti4
Atu_Ti4
hairpin
structured_simple
Avalong_thermometer
Avalong_thermometer
3WJ
structured_simple
Avashort_thermometer
Avashort_thermometer
3H
structured_simple
b55
b55
2H
structured_simple
bablM
bablM
2H
structured_simple
babR_5UTR
babR_5UTR
3WJ
structured_simple
Bacillaceae-1
Bacillaceae-1
2H
structured_simple
Bacillus-plasmid
Bacillus-plasmid
hairpin
structured_simple
Bacteria_large_SRP
SRP
SRP
structured_complex
Bacteria_small_SRP
SRP
SRP
structured_complex
Bacteroidales-1
Bacteroidales-1
3WJ
structured_simple
Bacteroides-1
Bacteroides-1
2H
structured_simple
Bacteroid-trp
Bacteroid-trp
hairpin
structured_simple
BaMV_CRE
BaMV_CRE
4H
structured_simple
bantam
mir-81
hairpin
structured_simple
BASRCI153
BASRCI153
complex unclassified
structured_complex
BASRCI27
BASRCI27
3WJ
structured_simple
BASRCI337
BASRCI337
complex unclassified
structured_complex
BASRCI408
BASRCI408
complex unclassified
structured_complex
BASRCI414
BASRCI414
complex unclassified
structured_complex
BASRCII26
BASRCII26
complex unclassified
structured_complex
Betaproteobacteria_toxic_sRNA
Betaproteobacteria_toxic_sRNA
2H
structured_simple
beta_tmRNA
tRNA
tRNA-like
structured_simple
bicoid_3
bicoid_3
complex unclassified
structured_complex
BjrC1505
BjrC1505
complex unclassified
structured_complex
BjrC174
BjrC174
3WJ
structured_simple
BjrC68
BjrC68
2H
structured_simple
BjrC80
BjrC80
4H
structured_simple
BLi_r0872
BLi_r0872
hairpin
structured_simple
blv_FSE
blv_FSE
pseudoknot_simple
structured_simple
BLV_package
BLV_package
2H
structured_simple
BM-sr0117
BM-sr0117
hairpin
structured_simple
BMV3_UPD-PK1
BMV3_UPD-PK1
pseudoknot_simple
structured_simple
BMV3_UPD-PK3
BMV3_UPD-PK3
pseudoknot_simple
structured_simple
Bp1_162
Bp1_162
2H
structured_simple
Bp1_684
Bp1_684
3WJ
structured_simple
Bp1_738
Bp1_738
complex unclassified
structured_complex
Bp1_781
Bp1_781
complex unclassified
structured_complex
Bp2_287
Bp2_287
complex unclassified
structured_complex
B_rapa_snoR775
H/ACA-box
2H
structured_simple
BSnc115
BSnc115
2H
structured_simple
BSnc119
BSnc119
2H
structured_simple
BSnc120
BSnc120
3H
structured_simple
BSnc121
BSnc121
3H
structured_simple
BSnc140
BSnc140
3H
structured_simple
BSnc150
BSnc150
hairpin
structured_simple
BSR0441
BSR0441
complex unclassified
structured_complex
BSR0602
BSR0602
complex unclassified
structured_complex
BSR0626
BSR0626
3H
structured_simple
BSR0653
BSR0653
complex unclassified
structured_complex
BSR0709
BSR0709
complex unclassified
structured_complex
BSR0739
BSR0739
complex unclassified
structured_complex
BSR1073
BSR1073
complex unclassified
structured_complex
BSR1350
BSR1350
3WJ
structured_simple
BsrC
BsrC
hairpin
structured_simple
BsrF
BsrF
3WJ
structured_simple
BsrG
BsrG
complex unclassified
structured_complex
BTE
BTE
4WJ
structured_simple
BTH_s1
BTH_s1
complex unclassified
structured_complex
BTH_s19
BTH_s19
3WJ
structured_simple
BTH_s39
BTH_s39
4WJ
structured_simple
bxd_1
bxd_1
3WJ
structured_simple
bxd_2
bxd_2
3H
structured_simple
bxd_3
bxd_3
2H
structured_simple
bxd_4
bxd_4
3WJ
structured_simple
bxd_5
bxd_5
2H
structured_simple
bxd_6
bxd_6
2H
structured_simple
bxd_7
bxd_7
hairpin
structured_simple
BYDV_5_UTR
BYDV_5_UTR
4H
structured_simple
C0299
C0299
2H
structured_simple
C0465
C0465
3H
structured_simple
C0719
C0719
complex unclassified
structured_complex
C1_109596F_thermometer
C1_109596F_thermometer
complex unclassified
structured_complex
C4
C4
3WJ
structured_simple
CAESAR
CAESAR
3WJ
structured_simple
Cardiovirus_CRE
Cardiovirus_CRE
hairpin
structured_simple
CbSR1
CbSR1
complex unclassified
structured_complex
CbSR12
CbSR12
complex unclassified
structured_complex
CbSR14
CbSR14
3WJ
structured_simple
CbSR2
CbSR2
complex unclassified
structured_complex
CbSR3
CbSR3
complex unclassified
structured_complex
CbSR4
CbSR4
complex unclassified
structured_complex
CbSR9
CbSR9
complex unclassified
structured_complex
CC0196
CC0196
hairpin
structured_simple
CC0734
CC0734
2H
structured_simple
CC1840
CC1840
2H
structured_simple
CC2171
CC2171
complex unclassified
structured_complex
CC3513
CC3513
3WJ
structured_simple
CC3552
CC3552
3WJ
structured_simple
CC3664
CC3664
3H
structured_simple
c-di-GMP-I
c-di-GMP-I
2H
structured_simple
c-di-GMP-II
c-di-GMP-II
complex unclassified
structured_complex
CDKN2B-AS
CDKN2B-AS
complex unclassified
structured_complex
CDKN2B-AS_2
CDKN2B-AS_2
2H
structured_simple
CDKN2B-AS_3
CDKN2B-AS_3
3H
structured_simple
ceN100
H/ACA-box
2H
structured_simple
ceN101
H/ACA-box
2H
structured_simple
ceN102
H/ACA-box
2H
structured_simple
ceN103
C/D-box
hairpin
structured_simple
ceN104
H/ACA-box
2H
structured_simple
ceN105
H/ACA-box
2H
structured_simple
ceN106
C/D-box
hairpin
structured_simple
ceN108
C/D-box
hairpin
structured_simple
ceN109
C/D-box
hairpin
structured_simple
ceN110
H/ACA-box
2H
structured_simple
ceN111
C/D-box
hairpin
structured_simple
ceN113
C/D-box
hairpin
structured_simple
ceN114
C/D-box
hairpin
structured_simple
ceN115
ceN115
3WJ
structured_simple
ceN125
H/ACA-box
2H
structured_simple
ceN126
H/ACA-box
2H
structured_simple
ceN22
C/D-box
hairpin
structured_simple
ceN23-1
ceN23-1
hairpin
structured_simple
ceN27
C/D-box
hairpin
structured_simple
ceN28
C/D-box
hairpin
structured_simple
ceN30
C/D-box
hairpin
structured_simple
ceN33
C/D-box
hairpin
structured_simple
ceN36-1
H/ACA-box
2H
structured_simple
ceN38
H/ACA-box
2H
structured_simple
ceN39
H/ACA-box
2H
structured_simple
ceN40
C/D-box
hairpin
structured_simple
ceN41
H/ACA-box
2H
structured_simple
ceN42
H/ACA-box
2H
structured_simple
ceN43
H/ACA-box
2H
structured_simple
ceN44
C/D-box
hairpin
structured_simple
ceN45
H/ACA-box
2H
structured_simple
ceN46
H/ACA-box
2H
structured_simple
ceN47
C/D-box
hairpin
structured_simple
ceN48
H/ACA-box
2H
structured_simple
ceN49
H/ACA-box
2H
structured_simple
ceN51
H/ACA-box
2H
structured_simple
ceN53
C/D-box
hairpin
structured_simple
ceN54
C/D-box
hairpin
structured_simple
ceN56
ceN56
3WJ
structured_simple
ceN58
H/ACA-box
2H
structured_simple
ceN59
H/ACA-box
2H
structured_simple
ceN61
C/D-box
hairpin
structured_simple
ceN63
C/D-box
hairpin
structured_simple
ceN65
C/D-box
hairpin
structured_simple
ceN67
H/ACA-box
2H
structured_simple
ceN68
H/ACA-box
2H
structured_simple
ceN69
C/D-box
hairpin
structured_simple
ceN70
C/D-box
hairpin
structured_simple
ceN72-3_ceN74-2
ceN72-3_ceN74-2
4WJ
structured_simple
ceN80
H/ACA-box
2H
structured_simple
ceN81
H/ACA-box
2H
structured_simple
ceN82
H/ACA-box
2H
structured_simple
ceN84
H/ACA-box
2H
structured_simple
ceN86
H/ACA-box
2H
structured_simple
ceN88
H/ACA-box
2H
structured_simple
ceN89
C/D-box
hairpin
structured_simple
ceN92
H/ACA-box
2H
structured_simple
ceN93
ceN93
2H
structured_simple
Cgb105
Cgb105
4WJ
structured_simple
Chlorobi-1
Chlorobi-1
2H
structured_simple
Chlorobi-RRM
Chlorobi-RRM
2H
structured_simple
Chloroflexi-1
Chloroflexi-1
2H
structured_simple
cHP
cHP
hairpin
structured_simple
ciona-mir-92
miRNA2
hairpin
structured_simple
Cis2_sRNA
Cis2_sRNA
complex unclassified
structured_complex
Cis52_sRNA
Cis52_sRNA
3WJ
structured_simple
Cis8_sRNA
Cis8_sRNA
2H
structured_simple
Cis90_sRNA
Cis90_sRNA
complex unclassified
structured_complex
class_I_RNA
class_I_RNA
hairpin
structured_simple
Clostridiales-1
Clostridiales-1
4WJ
structured_simple
ClpQY_promoter
ClpQY_promoter
hairpin
structured_simple
CLRN1-AS1
CLRN1-AS1
3H
structured_simple
CncR1
CncR1
complex unclassified
structured_complex
CnfY_thermometer
CnfY_thermometer
hairpin
structured_simple
Cobalamin
Cobalamin
4WJ
structured_simple
Collinsella-1
Collinsella-1
4H
structured_simple
CopA
CopA
2H
structured_simple
Corona_FSE
Corona_FSE
pseudoknot_simple
structured_simple
Corona_package
Corona_package
hairpin
structured_simple
Corona_pk3
Corona_pk3
pseudoknot_simple
structured_simple
Corona_SL-III
Corona_SL-III
hairpin
structured_simple
CoTC_ribozyme
CoTC_ribozyme
complex unclassified
structured_complex
CPEB3_ribozyme
CPEB3_ribozyme
complex unclassified
structured_complex
CpoB_ybgF_thermometer
CpoB_ybgF_thermometer
2H
structured_simple
crcB
crcB
hairpin
structured_simple
CrcZ
CrcZ
complex unclassified
structured_complex
CrfA
CrfA
complex unclassified
structured_complex
CRISPR-DR10
CRISPR-DR
hairpin
structured_simple
CRISPR-DR11
CRISPR-DR
hairpin
structured_simple
CRISPR-DR12
CRISPR-DR
hairpin
structured_simple
CRISPR-DR13
CRISPR-DR
hairpin
structured_simple
CRISPR-DR14
CRISPR-DR
hairpin
structured_simple
CRISPR-DR15
CRISPR-DR
hairpin
structured_simple
CRISPR-DR16
CRISPR-DR
hairpin
structured_simple
CRISPR-DR17
CRISPR-DR
hairpin
structured_simple
CRISPR-DR18
CRISPR-DR
hairpin
structured_simple
CRISPR-DR19
CRISPR-DR
hairpin
structured_simple
CRISPR-DR2
CRISPR-DR
hairpin
structured_simple
CRISPR-DR20
CRISPR-DR
hairpin
structured_simple
CRISPR-DR21
CRISPR-DR
hairpin
structured_simple
CRISPR-DR22
CRISPR-DR
hairpin
structured_simple
CRISPR-DR23
CRISPR-DR
hairpin
structured_simple
CRISPR-DR24
CRISPR-DR
hairpin
structured_simple
CRISPR-DR25
CRISPR-DR
hairpin
structured_simple
CRISPR-DR26
CRISPR-DR
hairpin
structured_simple
CRISPR-DR27
CRISPR-DR
hairpin
structured_simple
CRISPR-DR28
CRISPR-DR
hairpin
structured_simple
CRISPR-DR29
CRISPR-DR
hairpin
structured_simple
CRISPR-DR3
CRISPR-DR
hairpin
structured_simple
CRISPR-DR30
CRISPR-DR
hairpin
structured_simple
CRISPR-DR31
CRISPR-DR
hairpin
structured_simple
CRISPR-DR32
CRISPR-DR
hairpin
structured_simple
CRISPR-DR33
CRISPR-DR
hairpin
structured_simple
CRISPR-DR34
CRISPR-DR
hairpin
structured_simple
CRISPR-DR35
CRISPR-DR
hairpin
structured_simple
CRISPR-DR36
CRISPR-DR
hairpin
structured_simple
CRISPR-DR37
CRISPR-DR
hairpin
structured_simple
CRISPR-DR38
CRISPR-DR
hairpin
structured_simple
CRISPR-DR39
CRISPR-DR
hairpin
structured_simple
CRISPR-DR4
CRISPR-DR
hairpin
structured_simple
CRISPR-DR40
CRISPR-DR
hairpin
structured_simple
CRISPR-DR41
CRISPR-DR
hairpin
structured_simple
CRISPR-DR42
CRISPR-DR
hairpin
structured_simple
CRISPR-DR43
CRISPR-DR
hairpin
structured_simple
CRISPR-DR44
CRISPR-DR
hairpin
structured_simple
CRISPR-DR45
CRISPR-DR
hairpin
structured_simple
CRISPR-DR46
CRISPR-DR
hairpin
structured_simple
CRISPR-DR47
CRISPR-DR
hairpin
structured_simple
CRISPR-DR48
CRISPR-DR
hairpin
structured_simple
CRISPR-DR49
CRISPR-DR
hairpin
structured_simple
CRISPR-DR5
CRISPR-DR
hairpin
structured_simple
CRISPR-DR50
CRISPR-DR
hairpin
structured_simple
CRISPR-DR51
CRISPR-DR
hairpin
structured_simple
CRISPR-DR52
CRISPR-DR
hairpin
structured_simple
CRISPR-DR53
CRISPR-DR
hairpin
structured_simple
CRISPR-DR54
CRISPR-DR
hairpin
structured_simple
CRISPR-DR55
CRISPR-DR
hairpin
structured_simple
CRISPR-DR56
CRISPR-DR
hairpin
structured_simple
CRISPR-DR57
CRISPR-DR
hairpin
structured_simple
CRISPR-DR58
CRISPR-DR
hairpin
structured_simple
CRISPR-DR6
CRISPR-DR
hairpin
structured_simple
CRISPR-DR60
CRISPR-DR
hairpin
structured_simple
CRISPR-DR61
CRISPR-DR
hairpin
structured_simple
CRISPR-DR62
CRISPR-DR
hairpin
structured_simple
CRISPR-DR63
CRISPR-DR
hairpin
structured_simple
CRISPR-DR64
CRISPR-DR
hairpin
structured_simple
CRISPR-DR65
CRISPR-DR
hairpin
structured_simple
CRISPR-DR66
CRISPR-DR
hairpin
structured_simple
CRISPR-DR7
CRISPR-DR
hairpin
structured_simple
CRISPR-DR8
CRISPR-DR
hairpin
structured_simple
CRISPR-DR9
CRISPR-DR
hairpin
structured_simple
cspA
cspA
complex unclassified
structured_complex
CsrB
Csr_Rsm_clan
complex unclassified
structured_complex
CsrC
Csr_Rsm_clan
complex unclassified
structured_complex
csRNA
csRNA
2H
structured_simple
ctRNA_p42d
ctRNA_p42d
hairpin
structured_simple
ctRNA_pGA1
ctRNA_pGA1
2H
structured_simple
ctRNA_pND324
ctRNA_pND324
2H
structured_simple
ctRNA_pT181
ctRNA_pT181
2H
structured_simple
CTV_rep_sig
CTV_rep_sig
complex unclassified
structured_complex
Cyano-1
Cyano-1
hairpin
structured_simple
Cyano-2
Cyano-2
3H
structured_simple
cyano_het_sRNA
cyano_het_sRNA
2H
structured_simple
cyano_tmRNA
tRNA
tRNA-like
structured_simple
CyaR_RyeE
CyaR_RyeE
2H
structured_simple
DAOA-AS1_1
DAOA-AS1_1
3H
structured_simple
DAOA-AS1_2
DAOA-AS1_2
complex unclassified
structured_complex
DapZ
DapZ
2H
structured_simple
DdR1
C/D-box
hairpin
structured_simple
DdR10
C/D-box
hairpin
structured_simple
DdR11
C/D-box
hairpin
structured_simple
DdR12
C/D-box
hairpin
structured_simple
DdR13
C/D-box
hairpin
structured_simple
DdR14
C/D-box
hairpin
structured_simple
DdR15
C/D-box
hairpin
structured_simple
DdR16
C/D-box
hairpin
structured_simple
DdR17
C/D-box
hairpin
structured_simple
DdR18
H/ACA-box
2H
structured_simple
DdR2
C/D-box
hairpin
structured_simple
DdR35
DdR34
3WJ
structured_simple
DdR4
C/D-box
hairpin
structured_simple
DdR5
C/D-box
hairpin
structured_simple
DdR6
C/D-box
hairpin
structured_simple
DdR7
C/D-box
hairpin
structured_simple
DdR8
C/D-box
hairpin
structured_simple
Deinococcus_Y_RNA
Deinococcus_Y_RNA
3WJ
structured_simple
DENV_SLA
DENV_SLA
3WJ
structured_simple
DGCR5
DGCR5
hairpin
structured_simple
Diantho_3_UTR
Diantho_3_UTR
4H
structured_simple
DicF
DicF
hairpin
structured_simple
Dictyoglomi-1
Dictyoglomi-1
3WJ
structured_simple
Dictyostelium_SRP
SRP
SRP
structured_complex
DISC2
DISC2
2H
structured_simple
DLEU1_1
DLEU1_1
complex unclassified
structured_complex
DLEU1_2
DLEU1_2
complex unclassified
structured_complex
DLEU2_1
DLEU2_1
2H
structured_simple
DLEU2_2
DLEU2_2
2H
structured_simple
DLEU2_3
DLEU2_3
hairpin
structured_simple
DLEU2_4
DLEU2_4
2H
structured_simple
DLEU2_5
DLEU2_5
hairpin
structured_simple
DLEU2_6
DLEU2_6
4H
structured_simple
DLG2-AS1_1
DLG2-AS1_1
4H
structured_simple
DLG2-AS1_2
DLG2-AS1_2
multiple_domains
structured_complex
DLX6-AS1_1
DLX6-AS1_1
hairpin
structured_simple
DLX6-AS1_2
DLX6-AS1_2
3WJ
structured_simple
DM_SisR1
DM_SisR1
complex unclassified
structured_complex
DnaX
DnaX
hairpin
structured_simple
Downstream-peptide
Downstream-peptide
complex unclassified
structured_complex
DPB
DPB
hairpin
structured_simple
drz-agam-1
drz-agam-1
3WJ
structured_simple
drz-agam-2-2
drz-agam-2-2
complex unclassified
structured_complex
DsrA
DsrA
3H
structured_simple
EAV_LTH
EAV_LTH
hairpin
structured_simple
EBER1
EBER1
complex unclassified
structured_complex
EBER2
EBER2
3WJ
structured_simple
EBv-sisRNA-1
EBv-sisRNA-1
2H
structured_simple
EBv-sisRNA-2
EBv-sisRNA-2
hairpin
structured_simple
eeev_FSE
eeev_FSE
hairpin
structured_simple
EF0408_EF0409
EF0408_EF0409
complex unclassified
structured_complex
EF0605_EF0606
EF0605_EF0606
3H
structured_simple
EF0820_EF0821
EF0820_EF0821
complex unclassified
structured_complex
EF0869_EF0870
EF0869_EF0870
complex unclassified
structured_complex
EF1368_EF1369
EF1368_EF1369
complex unclassified
structured_complex
EF3314_EF3315
EF3314_EF3315
4H
structured_simple
eiav_FSE
eiav_FSE
hairpin
structured_simple
enod40
enod40
3H
structured_simple
Entero_5_CRE
Entero_5_CRE
4WJ
structured_simple
Entero_CRE
Entero_CRE
hairpin
structured_simple
Entero_OriR
Entero_OriR
complex unclassified
structured_complex
epsC
epsC
complex unclassified
structured_complex
Erse
Erse
complex unclassified
structured_complex
ES003
ES003
2H
structured_simple
ES036
ES036
hairpin
structured_simple
ES056
ES056
2H
structured_simple
ES173
ES173
hairpin
structured_simple
ES205
ES205
hairpin
structured_simple
ES222
ES222
2H
structured_simple
ES239
ES239
3H
structured_simple
Esr41
Esr41
3H
structured_simple
Evf-2_5p
Evf-2_5p
3H
structured_simple
F6
F6
hairpin
structured_simple
FAM13A-AS1_1
FAM13A-AS1_1
4H
structured_simple
FAM13A-AS1_2
FAM13A-AS1_2
3WJ
structured_simple
FAS-AS1
FAS-AS1
multiple_domains
structured_complex
FasX
FasX
3H
structured_simple
FdoG1_thermometer
FdoG1_thermometer
complex unclassified
structured_complex
ffh
ffh
hairpin
structured_simple
FIE3
FIE3
hairpin
structured_simple
FinP
FinP-traJ
2H
structured_simple
fiv_FSE
fiv_FSE
pseudoknot_simple
structured_simple
Flavi_CRE
Flavi_CRE
2H
structured_simple
flavi_FSE
flavi_FSE
pseudoknot_simple
structured_simple
Flavivirus_DB
Flavivirus_DB
3WJ
structured_simple
Flavivirus_SLIV
Flavivirus_SLIV
3WJ
structured_simple
Flavo-1
Flavo-1
hairpin
structured_simple
flg-Rhizobiales
flg-Rhizobiales
3H
structured_simple
flpD
flpD
hairpin
structured_simple
FMN
FMN
complex unclassified
structured_complex
FMR1-AS1_1
FMR1-AS1_1
hairpin
structured_simple
FMR1-AS1_2
FMR1-AS1_2
hairpin
structured_simple
FourU
FourU
2H
structured_simple
frnS
frnS
3H
structured_simple
FsrA
FsrA
2H
structured_simple
fstAT
fstAT
3WJ
structured_simple
FtrA
FtrA
3H
structured_simple
FtrB
FtrB
3H
structured_simple
FTX_1
FTX_1
2H
structured_simple
FTX_2
FTX_2
2H
structured_simple
FTX_3
FTX_3
3WJ
structured_simple
FTX_4
FTX_4
4WJ
structured_simple
FTX_5
FTX_5
complex unclassified
structured_complex
Fungi_SRP
SRP
SRP
structured_complex
Fungi_U3
C/D-box
hairpin
structured_simple
Fwd6_3p_UTR
Fwd6_3p_UTR
4H
structured_simple
g2
g2
hairpin
structured_simple
GABA3
GABA3
hairpin
structured_simple
gabT
gabT
hairpin
structured_simple
gadd7
gadd7
complex unclassified
structured_complex
GadY
GadY
3H
structured_simple
GAIT
GAIT
hairpin
structured_simple
Gammaretro_CES
Gammaretro_CES
3H
structured_simple
G-CSF_SLDE
G-CSF_SLDE
3H
structured_simple
GcvB
GcvB
complex unclassified
structured_complex
GHRLOS
GHRLOS
3H
structured_simple
GIR1
GIR1
complex unclassified
structured_complex
glmS
glmS
4H
structured_simple
GlmY_tke1
Glm
3WJ
structured_simple
GlmZ_SraJ
Glm
3WJ
structured_simple
glnA
glnA
3WJ
structured_simple
Gl_RNase_MRP
Gl_RNase_MRP
3H
structured_simple
GlsR10
C/D-box
hairpin
structured_simple
GlsR13
C/D-box
hairpin
structured_simple
GlsR14
C/D-box
hairpin
structured_simple
GlsR16_miR3
GlsR16_miR3
hairpin
structured_simple
GlsR17_miR2
GlsR17_miR2
hairpin
structured_simple
GlsR18
H/ACA-box
2H
structured_simple
GlsR19
H/ACA-box
2H
structured_simple
GlsR1_miR6
GlsR1_miR6
hairpin
structured_simple
GlsR20
H/ACA-box
2H
structured_simple
GlsR21
H/ACA-box
2H
structured_simple
GlsR22
H/ACA-box
2H
structured_simple
GlsR23
H/ACA-box
2H
structured_simple
GlsR24
H/ACA-box
2H
structured_simple
GlsR25
H/ACA-box
2H
structured_simple
GlsR26
H/ACA-box
2H
structured_simple
GlsR27
H/ACA-box
2H
structured_simple
GlsR2_miR4
GlsR2_miR4
hairpin
structured_simple
GlsR4
C/D-box
hairpin
structured_simple
GlsR5
C/D-box
hairpin
structured_simple
GlsR6
C/D-box
hairpin
structured_simple
GlsR7
C/D-box
hairpin
structured_simple
GlsR8_miR10
GlsR8_miR10
hairpin
structured_simple
GlsR9
C/D-box
hairpin
structured_simple
Gl_U1
U1
U1_snRNA
structured_complex
Gl_U2
U2
Intron_gpII-like
structured_complex
Gl_U4
U4
U4_snRNA
structured_complex
Gl_U6
U6
Intron_gpII-like
structured_complex
Glycine
Glycine
3WJ
structured_simple
GmglnB1_5p_UTR
GmglnB1_5p_UTR
2H
structured_simple
GNAS-AS1_1
GNAS-AS1_1
2H
structured_simple
GNAS-AS1_2
GNAS-AS1_2
2H
structured_simple
GNAS-AS1_3
GNAS-AS1_3
hairpin
structured_simple
GNAS-AS1_4
GNAS-AS1_4
complex unclassified
structured_complex
GNAS-AS1_5
GNAS-AS1_5
hairpin
structured_simple
GOLLD
GOLLD
complex unclassified
structured_complex
GP_knot1
GP_knot1
pseudoknot_simple
structured_simple
GP_knot2
GP_knot2
pseudoknot_simple
structured_simple
greA
greA
4H
structured_simple
GRIK4_3p_UTR
GRIK4_3p_UTR
hairpin
structured_simple
Gurken
Gurken
hairpin
structured_simple
Gut-1
Gut-1
3H
structured_simple
gyrA
gyrA
2H
structured_simple
H19_1
H19_1
hairpin
structured_simple
H19_2
H19_2
hairpin
structured_simple
H19_3
H19_3
2H
structured_simple
h2cR
h2cR
hairpin
structured_simple
Hairpin_ribozyme
Hairpin ribozyme
hairpin
structured_simple
Hammerhead_1
Hammerhead
3WJ
structured_simple
Hammerhead_3
Hammerhead
3WJ
structured_simple
Hammerhead_HH10
Hammerhead
3WJ
structured_simple
Hammerhead_HH9
Hammerhead
3WJ
structured_simple
Hammerhead_II
Hammerhead
3WJ
structured_simple
HAR1A
HAR1A
3WJ
structured_simple
Hatchet
Hatchet
2H
structured_simple
HAV_CRE
HAV_CRE
hairpin
structured_simple
HBV_epsilon
Hepadnavirus_epsilon
hairpin
structured_simple
HCV_ARF_SL
HCV_ARF_SL
2H
structured_simple
HCV_package
HCV_package
hairpin
structured_simple
HCV_package-SL4629
HCV_package-SL4629
hairpin
structured_simple
HCV_package-SL6067
HCV_package-SL6067
hairpin
structured_simple
HCV_package-SL733
HCV_package-SL733
hairpin
structured_simple
HCV_SLIV
HCV_SLIV
hairpin
structured_simple
HCV_SLVII
HCV_SLVII
hairpin
structured_simple
HCV_X3
HCV_X2
3H
structured_simple
HDV-F-prausnitzii
HDV-F-prausnitzii
2H
structured_simple
HDV_ribozyme
HDV_ribozyme
complex unclassified
structured_complex
HEARO
HEARO
complex unclassified
structured_complex
HepC_CRE
HepC_CRE
hairpin
structured_simple
HepE_CRE
HepE_CRE
2H
structured_simple
HgcC
HgcC
4WJ
structured_simple
HgcE
HgcE
hairpin
structured_simple
HgcF
HgcF
3H
structured_simple
HgcG
HgcG
3WJ
structured_simple
hilD_3p_UTR
hilD_3p_UTR
complex unclassified
structured_complex
His_leader
His_leader
3H
structured_simple
Histone3
Histone3
3WJ
structured_simple
HIV-1_DIS
HIV-1_DIS
hairpin
structured_simple
HIV-1_SD
HIV-1_SD
hairpin
structured_simple
HIV-1_SL3
HIV-1_SL3
hairpin
structured_simple
HIV-1_SL4
HIV-1_SL4
hairpin
structured_simple
HIV_FE
HIV_FE
hairpin
structured_simple
HIV_FS2
HIV_FS2
hairpin
structured_simple
HIV_GSL3
HIV_GSL3
hairpin
structured_simple
HIV_PBS
HIV_PBS
3WJ
structured_simple
HIV_POL-1_SL
HIV_POL-1_SL
3WJ
structured_simple
HLE
HLE
2H
structured_simple
hopC
hopC
hairpin
structured_simple
HOTAIR_1
HOTAIR_1
hairpin
structured_simple
HOTAIR_2
HOTAIR_2
2H
structured_simple
HOTAIR_3
HOTAIR_3
hairpin
structured_simple
HOTAIRM1_1
HOTAIRM1_1
multiple_domains
structured_complex
HOTAIRM1_2
HOTAIRM1_2
multiple_domains
structured_complex
HOTAIRM1_3
HOTAIRM1_3
hairpin
structured_simple
HOTAIRM1_4
HOTAIRM1_4
3WJ
structured_simple
HOTAIRM1_5
HOTAIRM1_5
3WJ
structured_simple
HOTTIP_1
HOTTIP_1
hairpin
structured_simple
HOTTIP_2
HOTTIP_2
multiple_domains
structured_complex
HOTTIP_3
HOTTIP_3
complex unclassified
structured_complex
HOTTIP_4
HOTTIP_4
multiple_domains
structured_complex
HOXA11-AS1_1
HOXA11-AS1_1
3H
structured_simple
HOXA11-AS1_2
HOXA11-AS1_2
complex unclassified
structured_complex
HOXA11-AS1_3
HOXA11-AS1_3
4WJ
structured_simple
HOXA11-AS1_4
HOXA11-AS1_4
complex unclassified
structured_complex
HOXA11-AS1_5
HOXA11-AS1_5
multiple_domains
structured_complex
HOXA11-AS1_6
HOXA11-AS1_6
complex unclassified
structured_complex
HOXB13-AS1_1
HOXB13-AS1_1
4H
structured_simple
HOXB13-AS1_2
HOXB13-AS1_2
3WJ
structured_simple
HPnc0260
HPnc0260
3H
structured_simple
HPnc0580
HPnc0580
3H
structured_simple
HrrF
HrrF
3H
structured_simple
Hrs1
Hrs1
2H
structured_simple
Hrs10
Hrs10
3H
structured_simple
Hrs12
Hrs12
3H
structured_simple
Hrs13
Hrs13
3H
structured_simple
Hrs21
Hrs21
4WJ
structured_simple
hsp17
hsp17
hairpin
structured_simple
Hsp83_3_UTR
Hsp83_3_UTR
complex unclassified
structured_complex
Hsp90_CRE
Hsp90_CRE
3WJ
structured_simple
HSR-omega_1
HSR-omega_1
hairpin
structured_simple
HSR-omega_2
HSR-omega_2
hairpin
structured_simple
HSUR
HSUR
2H
structured_simple
htlv_FSE
htlv_FSE
hairpin
structured_simple
HtrA_thermometer
HtrA_thermometer
hairpin
structured_simple
HTT-AS1_1
HTT-AS1_1
multiple_domains
structured_complex
HTT-AS1_2
HTT-AS1_2
3WJ
structured_simple
HTT-AS1_3
HTT-AS1_3
3WJ
structured_simple
HULC
HULC
2H
structured_simple
hveRNA
5S_rRNA
rRNA
structured_complex
hvt-mir-H
hvt-mir-H
hairpin
structured_simple
HYMAI
HYMAI
complex unclassified
structured_complex
IBV_D-RNA
IBV_D-RNA
hairpin
structured_simple
icaR_3p_UTR
icaR_3p_UTR
complex unclassified
structured_complex
icaR_5p_UTR
icaR_5p_UTR
hairpin
structured_simple
IFN_gamma
IFN_gamma
complex unclassified
structured_complex
IhtA
IhtA
3H
structured_simple
IMES-1
IMES-1
complex unclassified
structured_complex
IMES-2
IMES-2
4H
structured_simple
IMES-3
IMES-3
2H
structured_simple
IMES-4
IMES-4
3H
structured_simple
Intron_gpI-IA
Intron_gpI
Intron_gpI-like
structured_complex
Intron_gpII-A
Intron_gpII
Intron_gpII-like
structured_complex
Intron_gpI-IB
Intron_gpI
Intron_gpI-like
structured_complex
Intron_gpII-B
Intron_gpII
Intron_gpII-like
structured_complex
Intron_gpI-IC
Intron_gpI
Intron_gpI-like
structured_complex
Intron_gpII-C
Intron_gpII
Intron_gpII-like
structured_complex
Intron_gpI-ID
Intron_gpI
Intron_gpI-like
structured_complex
Intron_gpI-IE
Intron_gpI
Intron_gpI-like
structured_complex
Intron_gpII-ORFless
Intron_gpII
Intron_gpII-like
structured_complex
Intron_gpII-Unclassified
Intron_gpII
Intron_gpII-like
structured_complex
InvR
InvR
3WJ
structured_simple
IRE_I
IRE_I
hairpin
structured_simple
IRE_II
IRE_II
hairpin
structured_simple
IRES_APC
IRES_APC
hairpin
structured_simple
IRES_Bag1
IRES_Bag1
IRES_multi_domain
structured_complex
IRES_Bip
IRES_Bip
IRES_multi_domain
structured_complex
IRES_c-myc
IRES_c-myc
IRES_multi_domain
structured_complex
IRES_Cripavirus
IRES_Cripavirus
IRES_multi_domain
structured_complex
IRES_c-sis
IRES_c-sis
IRES_multi_domain
structured_complex
IRES_Cx32
IRES_Cx32
IRES_multi_domain
structured_complex
IRES_Cx43
IRES_Cx43
IRES_multi_domain
structured_complex
IRES_cyp24a1
IRES_cyp24a1
IRES_multi_domain
structured_complex
IRES_EBNA
IRES_EBNA
IRES_multi_domain
structured_complex
IRES_FGF1
IRES_FGF1
IRES_multi_domain
structured_complex
IRES_FGF2
IRES_FGF2
IRES_multi_domain
structured_complex
IRES_HCV
IRES_HCV
IRES_multi_domain
structured_complex
IRES_HepA
IRES_HepA
IRES_multi_domain
structured_complex
IRES_HIF1
IRES_HIF1
IRES_multi_domain
structured_complex
IRES_Hsp70
IRES_Hsp70
IRES_multi_domain
structured_complex
IRES_IGF2
IRES_IGF2
IRES_multi_domain
structured_complex
IRES_KSHV
IRES_KSHV
IRES_multi_domain
structured_complex
IRES_Kv1_4
IRES_Kv1_4
IRES_multi_domain
structured_complex
IRES_L-myc
IRES_L-myc
IRES_multi_domain
structured_complex
IRES_mnt
IRES_mnt
IRES_multi_domain
structured_complex
IRES_n-myc
IRES_n-myc
IRES_multi_domain
structured_complex
IRES_Pesti
IRES_Pesti
IRES_multi_domain
structured_complex
IRES_Picorna
IRES_Picorna
IRES_multi_domain
structured_complex
IRES_Picorna_2
IRES_Picorna_2
IRES_multi_domain
structured_complex
IRES_RhPV
IRES_RhPV
IRES_multi_domain
structured_complex
IRES_Tobamo
IRES_Tobamo
IRES_multi_domain
structured_complex
IRES_TrkB
IRES_TrkB
IRES_multi_domain
structured_complex
IRES_VEGF_A
IRES_VEGF_A
IRES_multi_domain
structured_complex
IS009
IS009
3WJ
structured_simple
IS061
IS061
complex unclassified
structured_complex
IS102
IS102
4H
structured_simple
IS1222_FSE
IS1222_FSE
3WJ
structured_simple
IS128
IS128
complex unclassified
structured_complex
iscRS
iscRS
complex unclassified
structured_complex
IscS1_thermometer
IscS1_thermometer
4WJ
structured_simple
isrA
isrA
2H
structured_simple
isrB
isrB
3H
structured_simple
isrC
isrC
4WJ
structured_simple
isrD
isrD
2H
structured_simple
isrF
isrF
complex unclassified
structured_complex
isrG
isrG
complex unclassified
structured_complex
isrH
isrH
complex unclassified
structured_complex
isrI
isrI
2H
structured_simple
isrJ
isrJ
2H
structured_simple
isrK
isrK
3H
structured_simple
isrL
isrL
complex unclassified
structured_complex
IsrM
IsrM
complex unclassified
structured_complex
isrN
isrN
3WJ
structured_simple
isrO
isrO
3WJ
structured_simple
isrP
isrP
3WJ
structured_simple
isrQ
isrQ
complex unclassified
structured_complex
IsrR
IsrR
hairpin
structured_simple
istR
istR
3H
structured_simple
JA01
JA01
4WJ
structured_simple
JA02
JA02
3H
structured_simple
JA03
JA03
complex unclassified
structured_complex
JA04
JA04
2H
structured_simple
JEV_hairpin
JEV_hairpin
hairpin
structured_simple
JPX_1
JPX_1
multiple_domains
structured_complex
JPX_2
JPX_2
2H
structured_simple
JUMPstart
JUMPstart
hairpin
structured_simple
K10_TLS
K10_TLS
hairpin
structured_simple
KatA_thermometer
KatA_thermometer
4H
structured_simple
K_chan_RES
K_chan_RES
hairpin
structured_simple
KCNQ1OT1_1
KCNQ1OT1_1
hairpin
structured_simple
KCNQ1OT1_2
KCNQ1OT1_2
complex unclassified
structured_complex
KCNQ1OT1_3
KCNQ1OT1_3
hairpin
structured_simple
KCNQ1OT1_5
KCNQ1OT1_5
2H
structured_simple
KRAS_3UTR
KRAS_3UTR
hairpin
structured_simple
L10_leader
L10_leader
2H
structured_simple
L13_leader
L13_leader
hairpin
structured_simple
L17DE
L17DE
2H
structured_simple
L19_leader
L19_leader
hairpin
structured_simple
L20_leader
L20_leader
3H
structured_simple
L21_leader
L21_leader
hairpin
structured_simple
lactis-plasmid
lactis-plasmid
2H
structured_simple
Lacto-rpoB
Lacto-rpoB
hairpin
structured_simple
Lacto-usp
Lacto-usp
hairpin
structured_simple
Lambda_thermo
Lambda_thermo
hairpin
structured_simple
LasI_thermometer
LasI_thermometer
3H
structured_simple
LcrF_thermometer
LcrF_thermometer
3WJ
structured_simple
LDH1_5p_UTR
LDH1_5p_UTR
3WJ
structured_simple
let-7
let-7
hairpin
structured_simple
Leu_leader
Leu_leader
2H
structured_simple
leu-phe_leader
leu-phe_leader
3WJ
structured_simple
LhrA
LhrA
4H
structured_simple
LhrC
LhrC
2H
structured_simple
lin-4
lin-4
hairpin
structured_simple
LINC00901
LINC00901
complex unclassified
structured_complex
lincRNA-p21_1
lincRNA-p21_1
complex unclassified
structured_complex
lincRNA-p21_2
lincRNA-p21_2
hairpin
structured_simple
livK
livK
2H
structured_simple
LLnc147
LLnc147
4H
structured_simple
Lnt
Lnt
hairpin
structured_simple
LSU_rRNA_archaea
LSU_rRNA
rRNA
structured_complex
LSU_rRNA_bacteria
LSU_rRNA
rRNA
structured_complex
LSU_rRNA_eukarya
LSU_rRNA
rRNA
structured_complex
LSU_trypano_mito
LSU_rRNA
rRNA
structured_complex
lsy-6
lsy-6
hairpin
structured_simple
Lysine
Lysine
complex unclassified
structured_complex
MALAT1
MALAT1
2H
structured_simple
manA
manA
complex unclassified
structured_complex
ManX_thermometer
ManX_thermometer
hairpin
structured_simple
mascRNA-menRNA
tRNA
tRNA-like
structured_simple
MAT2A_A
MAT2A_A
hairpin
structured_simple
MAT2A_B
MAT2A_B
hairpin
structured_simple
MAT2A_C
MAT2A_C
hairpin
structured_simple
MAT2A_D
MAT2A_D
hairpin
structured_simple
MAT2A_E
MAT2A_E
hairpin
structured_simple
MAT2A_F
MAT2A_F
hairpin
structured_simple
Mcr7
Mcr7
complex unclassified
structured_complex
MCS4
MCS4
3H
structured_simple
MEG3_2
MEG3_2
2H
structured_simple
MEG8_1
MEG8_1
hairpin
structured_simple
MEG8_2
MEG8_2
4WJ
structured_simple
MEG8_3
MEG8_3
multiple_domains
structured_complex
MESTIT1_1
MESTIT1_1
4H
structured_simple
MESTIT1_2
MESTIT1_2
multiple_domains
structured_complex
MESTIT1_3
MESTIT1_3
2H
structured_simple
Metazoa_SRP
SRP
SRP
structured_complex
Methylobacterium-1
Methylobacterium-1
3H
structured_simple
MFR
MFR
3WJ
structured_simple
Mg_sensor
Mg_sensor
3WJ
structured_simple
MIAT_exon1
MIAT_exon1
4WJ
structured_simple
MIAT_exon5_1
MIAT_exon5_1
2H
structured_simple
MIAT_exon5_2
MIAT_exon5_2
2H
structured_simple
MIAT_exon5_3
MIAT_exon5_3
complex unclassified
structured_complex
MicA
MicA
2H
structured_simple
MicC
MicC
3H
structured_simple
MicF
MicF
2H
structured_simple
MicL
MicL
complex unclassified
structured_complex
Mico1
Mico1
complex unclassified
structured_complex
MicX
MicX
4H
structured_simple
MIMT1_1
MIMT1_1
3WJ
structured_simple
mini-ykkC
mini-ykkC
2H
structured_simple
mir-1
miRNA2
hairpin
structured_simple
mir-10
miRNA2
hairpin
structured_simple
mir-101
miRNA2
hairpin
structured_simple
mir-1017
mir-1017
hairpin
structured_simple
MIR1023
miRNA1
hairpin
structured_simple
MIR1027
miRNA2
hairpin
structured_simple
mir-103
miRNA2
hairpin
structured_simple
mir-105
miRNA2
hairpin
structured_simple
mir-11
miRNA1
hairpin
structured_simple
MIR1122
miRNA1
hairpin
structured_simple
MIR1151
MIR1151
hairpin
structured_simple
mir-1178
miRNA2
hairpin
structured_simple
mir-1180
miRNA2
hairpin
structured_simple
mir-1183
miRNA2
hairpin
structured_simple
mir-12
miRNA2
hairpin
structured_simple
mir-1207
miRNA2
hairpin
structured_simple
mir-1208
miRNA2
hairpin
structured_simple
mir-122
miRNA2
hairpin
structured_simple
MIR1222
miRNA2
hairpin
structured_simple
MIR1223
MIR1223
hairpin
structured_simple
mir-1224
miRNA2
hairpin
structured_simple
mir-1225
mir-1225
hairpin
structured_simple
mir-1226
miRNA2
hairpin
structured_simple
mir-1227
miRNA2
hairpin
structured_simple
mir-1237
miRNA2
hairpin
structured_simple
mir-124
mir-124
hairpin
structured_simple
mir-1249
miRNA2
hairpin
structured_simple
mir-1251
miRNA2
hairpin
structured_simple
mir-1253
miRNA2
hairpin
structured_simple
mir-1255
miRNA2
hairpin
structured_simple
mir-126
miRNA2
hairpin
structured_simple
mir-1265
miRNA2
hairpin
structured_simple
mir-127
miRNA2
hairpin
structured_simple
mir-1275
miRNA2
hairpin
structured_simple
mir-128
miRNA2
hairpin
structured_simple
mir-1280
miRNA2
hairpin
structured_simple
mir-1287
miRNA2
hairpin
structured_simple
mir-129
miRNA2
hairpin
structured_simple
mir-1296
miRNA2
hairpin
structured_simple
mir-130
miRNA2
hairpin
structured_simple
mir-1302
mir-1302
hairpin
structured_simple
mir-1306
mir-1306
hairpin
structured_simple
mir-1307
miRNA2
hairpin
structured_simple
mir-132
mir-132
hairpin
structured_simple
mir-133
miRNA2
hairpin
structured_simple
mir-134
miRNA2
hairpin
structured_simple
mir-135
miRNA2
hairpin
structured_simple
mir-136
miRNA2
hairpin
structured_simple
mir-137
miRNA2
hairpin
structured_simple
mir-138
miRNA2
hairpin
structured_simple
mir-1388
miRNA2
hairpin
structured_simple
mir-139
miRNA2
hairpin
structured_simple
mir-14
miRNA2
hairpin
structured_simple
mir-140
miRNA2
hairpin
structured_simple
mir-1419
mir-1419
hairpin
structured_simple
mir-142
miRNA2
hairpin
structured_simple
MIR1428
miRNA2
hairpin
structured_simple
mir-143
miRNA2
hairpin
structured_simple
mir-144
miRNA2
hairpin
structured_simple
MIR1444
miRNA2
hairpin
structured_simple
MIR1446
miRNA2
hairpin
structured_simple
mir-145
miRNA2
hairpin
structured_simple
mir-146
miRNA2
hairpin
structured_simple
mir-147
miRNA2
hairpin
structured_simple
mir-1473
miRNA2
hairpin
structured_simple
mir-148
miRNA2
hairpin
structured_simple
mir-149
miRNA2
hairpin
structured_simple
mir-1497
mir-1497
hairpin
structured_simple
mir-15
mir-15
hairpin
structured_simple
mir-150
miRNA2
hairpin
structured_simple
mir-153
miRNA2
hairpin
structured_simple
mir-154
miRNA2
hairpin
structured_simple
mir-155
miRNA2
hairpin
structured_simple
mir-156
miRNA1
hairpin
structured_simple
MIR158
miRNA2
hairpin
structured_simple
MIR159
MIR159
hairpin
structured_simple
mir-16
miRNA2
hairpin
structured_simple
mir-160
miRNA1
hairpin
structured_simple
MIR162_2
miRNA1
hairpin
structured_simple
MIR164
MIR164
hairpin
structured_simple
mir-166
mir-166
hairpin
structured_simple
mir-1662
mir-1662
hairpin
structured_simple
MIR167_1
MIR167_1
hairpin
structured_simple
MIR168
miRNA1
hairpin
structured_simple
MIR169_2
miRNA1
hairpin
structured_simple
MIR169_5
miRNA1
hairpin
structured_simple
mir-17
miRNA2
hairpin
structured_simple
MIR171_1
miRNA1
hairpin
structured_simple
MIR171_2
miRNA1
hairpin
structured_simple
mir-172
miRNA1
hairpin
structured_simple
mir-1803
mir-1803
hairpin
structured_simple
mir-181
miRNA2
hairpin
structured_simple
mir-182
miRNA2
hairpin
structured_simple
mir-1827
miRNA2
hairpin
structured_simple
mir-1829
miRNA2
hairpin
structured_simple
mir-183
miRNA2
hairpin
structured_simple
mir-184
miRNA2
hairpin
structured_simple
MIR1846
miRNA2
hairpin
structured_simple
mir-185
miRNA2
hairpin
structured_simple
mir-186
miRNA2
hairpin
structured_simple
mir-187
miRNA2
hairpin
structured_simple
mir-188
miRNA2
hairpin
structured_simple
mir-19
miRNA2
hairpin
structured_simple
mir-190
miRNA2
hairpin
structured_simple
mir-191
miRNA2
hairpin
structured_simple
mir-1912
miRNA2
hairpin
structured_simple
mir-192
miRNA2
hairpin
structured_simple
mir-193
miRNA2
hairpin
structured_simple
mir-1937
mir-1937
hairpin
structured_simple
mir-194
miRNA2
hairpin
structured_simple
mir-196
miRNA2
hairpin
structured_simple
mir-197
miRNA2
hairpin
structured_simple
mir-198
miRNA2
hairpin
structured_simple
mir-199
miRNA2
hairpin
structured_simple
mir-2
miRNA2
hairpin
structured_simple
mir-202
miRNA2
hairpin
structured_simple
mir-2024
miRNA2
hairpin
structured_simple
mir-203
miRNA2
hairpin
structured_simple
mir-204
miRNA2
hairpin
structured_simple
mir-205
miRNA2
hairpin
structured_simple
mir-207
miRNA2
hairpin
structured_simple
mir-208
miRNA2
hairpin
structured_simple
mir-21
miRNA2
hairpin
structured_simple
mir-210
miRNA2
hairpin
structured_simple
MIR2118
miRNA1
hairpin
structured_simple
mir-214
miRNA2
hairpin
structured_simple
mir-216
miRNA2
hairpin
structured_simple
mir-217
miRNA2
hairpin
structured_simple
mir-218
miRNA2
hairpin
structured_simple
mir-219
miRNA2
hairpin
structured_simple
mir-22
miRNA2
hairpin
structured_simple
mir-221
miRNA2
hairpin
structured_simple
mir-223
miRNA2
hairpin
structured_simple
mir-2238
miRNA2
hairpin
structured_simple
mir-224
miRNA2
hairpin
structured_simple
mir-2241
miRNA2
hairpin
structured_simple
mir-228
miRNA2
hairpin
structured_simple
mir-23
miRNA2
hairpin
structured_simple
mir-230
miRNA2
hairpin
structured_simple
mir-231
miRNA2
hairpin
structured_simple
mir-232
miRNA2
hairpin
structured_simple
mir-233
miRNA2
hairpin
structured_simple
mir-234
miRNA2
hairpin
structured_simple
mir-235
miRNA2
hairpin
structured_simple
mir-239
miRNA2
hairpin
structured_simple
mir-24
miRNA2
hairpin
structured_simple
mir-240
miRNA2
hairpin
structured_simple
mir-241
miRNA2
hairpin
structured_simple
mir-242
miRNA2
hairpin
structured_simple
mir-244
miRNA2
hairpin
structured_simple
mir-245
miRNA2
hairpin
structured_simple
mir-246
miRNA2
hairpin
structured_simple
mir-248
miRNA2
hairpin
structured_simple
mir-249
miRNA2
hairpin
structured_simple
mir-2494
mir-2494
hairpin
structured_simple
mir-25
miRNA2
hairpin
structured_simple
mir-250
miRNA2
hairpin
structured_simple
mir-251
miRNA2
hairpin
structured_simple
mir-2518
miRNA2
hairpin
structured_simple
mir-252
mir-252
hairpin
structured_simple
mir-253
miRNA2
hairpin
structured_simple
mir-254
miRNA2
hairpin
structured_simple
mir-255
miRNA2
hairpin
structured_simple
MIR2587
miRNA2
hairpin
structured_simple
mir-259
miRNA2
hairpin
structured_simple
mir-26
miRNA2
hairpin
structured_simple
mir-263
miRNA2
hairpin
structured_simple
mir-268
miRNA2
hairpin
structured_simple
mir-27
miRNA2
hairpin
structured_simple
mir-274
miRNA1
hairpin
structured_simple
mir-275
miRNA2
hairpin
structured_simple
mir-276
miRNA2
hairpin
structured_simple
mir-277
miRNA1
hairpin
structured_simple
mir-2774
miRNA2
hairpin
structured_simple
mir-2778
miRNA2
hairpin
structured_simple
mir-278
miRNA2
hairpin
structured_simple
mir-2780
mir-2780
hairpin
structured_simple
mir-279
miRNA2
hairpin
structured_simple
mir-28
miRNA1
hairpin
structured_simple
mir-280
miRNA2
hairpin
structured_simple
mir-2807
miRNA2
hairpin
structured_simple
mir-281
miRNA2
hairpin
structured_simple
mir-282
miRNA2
hairpin
structured_simple
mir-283
miRNA2
hairpin
structured_simple
mir-2833
mir-2833
hairpin
structured_simple
mir-284
miRNA2
hairpin
structured_simple
mir-286
miRNA1
hairpin
structured_simple
mir-287
miRNA2
hairpin
structured_simple
mir-288
miRNA2
hairpin
structured_simple
mir-289
miRNA2
hairpin
structured_simple
mir-29
miRNA2
hairpin
structured_simple
mir-290
miRNA2
hairpin
structured_simple
MIR2907
MIR2907
hairpin
structured_simple
mir-296
miRNA2
hairpin
structured_simple
mir-2968
mir-2968
hairpin
structured_simple
mir-2970
mir-2970
hairpin
structured_simple
mir-2973
mir-2973
hairpin
structured_simple
mir-298
miRNA2
hairpin
structured_simple
mir-2985-2
mir-2985-2
hairpin
structured_simple
mir-299
miRNA2
hairpin
structured_simple
mir-3
miRNA2
hairpin
structured_simple
mir-30
miRNA2
hairpin
structured_simple
mir-301
mir-301
hairpin
structured_simple
mir-3017
miRNA1
hairpin
structured_simple
mir-302
miRNA2
hairpin
structured_simple
mir-304
miRNA2
hairpin
structured_simple
mir-305
miRNA2
hairpin
structured_simple
mir-306
miRNA2
hairpin
structured_simple
mir-308
miRNA2
hairpin
structured_simple
mir-31
mir-31
hairpin
structured_simple
mir-314
miRNA2
hairpin
structured_simple
mir-315
miRNA2
hairpin
structured_simple
mir-316
miRNA2
hairpin
structured_simple
mir-317
miRNA2
hairpin
structured_simple
mir-3179
miRNA2
hairpin
structured_simple
mir-318
miRNA2
hairpin
structured_simple
mir-3180
miRNA2
hairpin
structured_simple
mir-32
miRNA2
hairpin
structured_simple
mir-320
miRNA2
hairpin
structured_simple
mir-322
miRNA2
hairpin
structured_simple
mir-326
miRNA2
hairpin
structured_simple
mir-327
mir-327
hairpin
structured_simple
mir-328
miRNA2
hairpin
structured_simple
mir-33
miRNA2
hairpin
structured_simple
mir-330
miRNA2
hairpin
structured_simple
mir-331
miRNA2
hairpin
structured_simple
mir-335
miRNA2
hairpin
structured_simple
mir-337
miRNA2
hairpin
structured_simple
mir-338
miRNA2
hairpin
structured_simple
mir-339
miRNA2
hairpin
structured_simple
mir-34
miRNA2
hairpin
structured_simple
mir-340
miRNA2
hairpin
structured_simple
mir-342
miRNA2
hairpin
structured_simple
mir-344
miRNA2
hairpin
structured_simple
mir-345
miRNA2
hairpin
structured_simple
mir-346
miRNA2
hairpin
structured_simple
mir-35
mir-36
hairpin
structured_simple
mir-350
miRNA2
hairpin
structured_simple
mir-351
miRNA2
hairpin
structured_simple
mir-353
miRNA2
hairpin
structured_simple
mir-354
miRNA2
hairpin
structured_simple
mir-355
miRNA2
hairpin
structured_simple
mir-357
miRNA2
hairpin
structured_simple
mir-358
miRNA2
hairpin
structured_simple
mir-359
miRNA2
hairpin
structured_simple
mir-36
miRNA2
hairpin
structured_simple
mir-360
miRNA2
hairpin
structured_simple
mir-361
miRNA2
hairpin
structured_simple
mir-363
miRNA2
hairpin
structured_simple
mir-365
miRNA2
hairpin
structured_simple
mir-367
miRNA2
hairpin
structured_simple
mir-370
miRNA2
hairpin
structured_simple
mir-374
miRNA2
hairpin
structured_simple
mir-375
miRNA2
hairpin
structured_simple
mir-378
miRNA2
hairpin
structured_simple
mir-383
miRNA2
hairpin
structured_simple
mir-384
miRNA2
hairpin
structured_simple
MIR390
miRNA1
hairpin
structured_simple
mir-392
miRNA2
hairpin
structured_simple
mir-393
mir-393
hairpin
structured_simple
MIR394
miRNA1
hairpin
structured_simple
mir-395
miRNA1
hairpin
structured_simple
MIR396
MIR396
hairpin
structured_simple
MIR397
miRNA1
hairpin
structured_simple
MIR398
miRNA1
hairpin
structured_simple
mir-399
miRNA1
hairpin
structured_simple
MIR403
miRNA1
hairpin
structured_simple
MIR405
miRNA2
hairpin
structured_simple
MIR408
miRNA1
hairpin
structured_simple
mir-412
miRNA2
hairpin
structured_simple
mir-42
miRNA2
hairpin
structured_simple
mir-422
miRNA2
hairpin
structured_simple
mir-423
miRNA2
hairpin
structured_simple
mir-425
miRNA2
hairpin
structured_simple
mir-43
miRNA2
hairpin
structured_simple
miR-430
mir-290
hairpin
structured_simple
mir-431
miRNA2
hairpin
structured_simple
mir-432
miRNA2
hairpin
structured_simple
mir-433
miRNA2
hairpin
structured_simple
mir-434
miRNA2
hairpin
structured_simple
MIR439
miRNA2
hairpin
structured_simple
mir-44
miRNA2
hairpin
structured_simple
MIR444
miRNA1
hairpin
structured_simple
mir-448
miRNA2
hairpin
structured_simple
mir-449
miRNA2
hairpin
structured_simple
mir-450
miRNA2
hairpin
structured_simple
mir-451
miRNA2
hairpin
structured_simple
mir-452
miRNA2
hairpin
structured_simple
mir-454
miRNA2
hairpin
structured_simple
mir-455
miRNA2
hairpin
structured_simple
mir-456
miRNA2
hairpin
structured_simple
mir-458
miRNA2
hairpin
structured_simple
mir-46
miRNA2
hairpin
structured_simple
mir-460
miRNA2
hairpin
structured_simple
mir-463
miRNA2
hairpin
structured_simple
mir-471
miRNA2
hairpin
structured_simple
MIR473
miRNA1
hairpin
structured_simple
MIR474
miRNA1
hairpin
structured_simple
MIR475
miRNA1
hairpin
structured_simple
MIR476
miRNA2
hairpin
structured_simple
MIR477
miRNA1
hairpin
structured_simple
MIR478
MIR478
hairpin
structured_simple
mir-48
miRNA2
hairpin
structured_simple
MIR480
miRNA1
hairpin
structured_simple
mir-484
miRNA2
hairpin
structured_simple
mir-486
miRNA2
hairpin
structured_simple
mir-488
miRNA2
hairpin
structured_simple
mir-489
miRNA2
hairpin
structured_simple
mir-49
miRNA2
hairpin
structured_simple
mir-490
miRNA2
hairpin
structured_simple
mir-491
miRNA2
hairpin
structured_simple
mir-492
miRNA2
hairpin
structured_simple
mir-497
miRNA2
hairpin
structured_simple
mir-498
miRNA2
hairpin
structured_simple
mir-499
miRNA2
hairpin
structured_simple
mir-5
miRNA2
hairpin
structured_simple
mir-50
miRNA2
hairpin
structured_simple
mir-500
miRNA2
hairpin
structured_simple
mir-503
miRNA2
hairpin
structured_simple
mir-504
miRNA2
hairpin
structured_simple
mir-505
miRNA2
hairpin
structured_simple
mir-506
miRNA2
hairpin
structured_simple
mir-515
mir-290
hairpin
structured_simple
mir-52
miRNA2
hairpin
structured_simple
MIR529
miRNA1
hairpin
structured_simple
MIR530
miRNA1
hairpin
structured_simple
MIR535
miRNA2
hairpin
structured_simple
mir-540
miRNA2
hairpin
structured_simple
mir-541
miRNA2
hairpin
structured_simple
mir-542
miRNA2
hairpin
structured_simple
mir-544
miRNA1
hairpin
structured_simple
mir-548
miRNA2
hairpin
structured_simple
mir-549
miRNA2
hairpin
structured_simple
mir-55
miRNA2
hairpin
structured_simple
mir-550
miRNA2
hairpin
structured_simple
mir-551
miRNA2
hairpin
structured_simple
mir-552
miRNA2
hairpin
structured_simple
mir-553
miRNA2
hairpin
structured_simple
mir-554
mir-554
hairpin
structured_simple
mir-556
miRNA2
hairpin
structured_simple
mir-557
miRNA2
hairpin
structured_simple
mir-558
miRNA2
hairpin
structured_simple
mir-56
mir-56
hairpin
structured_simple
mir-562
miRNA2
hairpin
structured_simple
mir-563
miRNA2
hairpin
structured_simple
mir-567
miRNA2
hairpin
structured_simple
mir-569
miRNA2
hairpin
structured_simple
mir-572
miRNA2
hairpin
structured_simple
mir-573
miRNA2
hairpin
structured_simple
mir-574
miRNA2
hairpin
structured_simple
mir-575
miRNA2
hairpin
structured_simple
mir-576
miRNA2
hairpin
structured_simple
mir-577
miRNA2
hairpin
structured_simple
mir-578
miRNA2
hairpin
structured_simple
mir-58
miRNA2
hairpin
structured_simple
mir-580
miRNA2
hairpin
structured_simple
mir-581
miRNA2
hairpin
structured_simple
mir-582
miRNA2
hairpin
structured_simple
mir-583
miRNA2
hairpin
structured_simple
mir-584
miRNA1
hairpin
structured_simple
mir-586
miRNA2
hairpin
structured_simple
mir-589
miRNA2
hairpin
structured_simple
mir-590
miRNA2
hairpin
structured_simple
mir-592
miRNA2
hairpin
structured_simple
mir-593
miRNA2
hairpin
structured_simple
mir-597
miRNA2
hairpin
structured_simple
mir-598
miRNA2
hairpin
structured_simple
mir-599
miRNA2
hairpin
structured_simple
mir-6
miRNA2
hairpin
structured_simple
mir-60
miRNA2
hairpin
structured_simple
mir-600
miRNA2
hairpin
structured_simple
mir-601
mir-601
hairpin
structured_simple
mir-604
miRNA2
hairpin
structured_simple
mir-605
miRNA2
hairpin
structured_simple
mir-607
miRNA2
hairpin
structured_simple
mir-609
miRNA2
hairpin
structured_simple
mir-61
miRNA2
hairpin
structured_simple
mir-611
mir-611
hairpin
structured_simple
mir-612
miRNA2
hairpin
structured_simple
mir-615
miRNA2
hairpin
structured_simple
mir-616
miRNA2
hairpin
structured_simple
mir-618
miRNA2
hairpin
structured_simple
mir-62
miRNA2
hairpin
structured_simple
mir-621
miRNA2
hairpin
structured_simple
mir-624
miRNA2
hairpin
structured_simple
mir-626
miRNA2
hairpin
structured_simple
mir-628
miRNA2
hairpin
structured_simple
mir-63
miRNA2
hairpin
structured_simple
mir-631
miRNA2
hairpin
structured_simple
mir-632
miRNA2
hairpin
structured_simple
mir-633
miRNA2
hairpin
structured_simple
mir-636
miRNA2
hairpin
structured_simple
mir-638
mir-638
hairpin
structured_simple
mir-639
miRNA2
hairpin
structured_simple
mir-64
miRNA2
hairpin
structured_simple
mir-640
miRNA2
hairpin
structured_simple
mir-642
miRNA2
hairpin
structured_simple
mir-643
miRNA2
hairpin
structured_simple
mir-644
miRNA2
hairpin
structured_simple
mir-648
miRNA2
hairpin
structured_simple
mir-649
miRNA1
hairpin
structured_simple
mir-650
miRNA2
hairpin
structured_simple
mir-651
miRNA2
hairpin
structured_simple
mir-652
miRNA2
hairpin
structured_simple
mir-653
miRNA2
hairpin
structured_simple
mir-654
miRNA2
hairpin
structured_simple
mir-657
miRNA2
hairpin
structured_simple
mir-661
miRNA2
hairpin
structured_simple
mir-662
miRNA2
hairpin
structured_simple
mir-663
miRNA2
hairpin
structured_simple
mir-665
miRNA2
hairpin
structured_simple
mir-668
miRNA2
hairpin
structured_simple
mir-67
miRNA2
hairpin
structured_simple
mir-671
miRNA2
hairpin
structured_simple
mir-672
miRNA2
hairpin
structured_simple
mir-673
miRNA2
hairpin
structured_simple
mir-674
miRNA2
hairpin
structured_simple
mir-675
miRNA2
hairpin
structured_simple
mir-676
miRNA2
hairpin
structured_simple
mir-684
miRNA2
hairpin
structured_simple
mir-689
miRNA1
hairpin
structured_simple
mir-692
miRNA2
hairpin
structured_simple
mir-7
miRNA2
hairpin
structured_simple
mir-70
miRNA2
hairpin
structured_simple
mir-708
miRNA2
hairpin
structured_simple
mir-71
miRNA2
hairpin
structured_simple
mir-711
miRNA2
hairpin
structured_simple
mir-720
miRNA2
hairpin
structured_simple
mir-73
miRNA2
hairpin
structured_simple
mir-74
miRNA2
hairpin
structured_simple
mir-744
miRNA2
hairpin
structured_simple
mir-75
miRNA2
hairpin
structured_simple
mir-760
miRNA2
hairpin
structured_simple
mir-761
miRNA2
hairpin
structured_simple
mir-764
miRNA2
hairpin
structured_simple
mir-765
miRNA2
hairpin
structured_simple
mir-767
miRNA2
hairpin
structured_simple
mir-77
miRNA2
hairpin
structured_simple
mir-770
miRNA2
hairpin
structured_simple
mir-785
mir-785
hairpin
structured_simple
mir-786
miRNA2
hairpin
structured_simple
mir-787
miRNA2
hairpin
structured_simple
mir-788
mir-788
hairpin
structured_simple
mir-789
miRNA2
hairpin
structured_simple
mir-790
miRNA2
hairpin
structured_simple
mir-791
miRNA2
hairpin
structured_simple
mir-8
miRNA2
hairpin
structured_simple
mir-80
miRNA2
hairpin
structured_simple
mir-802
miRNA2
hairpin
structured_simple
MIR807
MIR807
hairpin
structured_simple
mir-81
miRNA2
hairpin
structured_simple
MIR811
MIR811
hairpin
structured_simple
MIR815
miRNA2
hairpin
structured_simple
MIR820
MIR820
hairpin
structured_simple
MIR821
MIR821
hairpin
structured_simple
MIR824
MIR824
hairpin
structured_simple
MIR828
miRNA1
hairpin
structured_simple
mir-83
miRNA2
hairpin
structured_simple
mir-84
miRNA2
hairpin
structured_simple
MIR845_1
miRNA2
hairpin
structured_simple
MIR845_2
MIR845_2
hairpin
structured_simple
mir-85
miRNA2
hairpin
structured_simple
MIR854
MIR854
hairpin
structured_simple
mir-86
miRNA2
hairpin
structured_simple
mir-87
miRNA2
hairpin
structured_simple
mir-872
miRNA2
hairpin
structured_simple
mir-873
mir-872
hairpin
structured_simple
mir-874
miRNA2
hairpin
structured_simple
mir-875
miRNA2
hairpin
structured_simple
mir-876
miRNA2
hairpin
structured_simple
mir-877
miRNA2
hairpin
structured_simple
mir-879
miRNA2
hairpin
structured_simple
mir-883
miRNA2
hairpin
structured_simple
mir-885
miRNA2
hairpin
structured_simple
mir-887
miRNA2
hairpin
structured_simple
mir-891
miRNA2
hairpin
structured_simple
mir-9
miRNA2
hairpin
structured_simple
mir-90
miRNA2
hairpin
structured_simple
mir-92
miRNA2
hairpin
structured_simple
mir-920
miRNA2
hairpin
structured_simple
mir-922
miRNA2
hairpin
structured_simple
mir-924
mir-924
hairpin
structured_simple
mir-927
miRNA2
hairpin
structured_simple
mir-929
miRNA2
hairpin
structured_simple
mir-932
miRNA2
hairpin
structured_simple
mir-934
miRNA2
hairpin
structured_simple
mir-936
miRNA2
hairpin
structured_simple
mir-937
miRNA2
hairpin
structured_simple
mir-938
miRNA2
hairpin
structured_simple
mir-939
miRNA2
hairpin
structured_simple
mir-940
miRNA2
hairpin
structured_simple
mir-941
miRNA2
hairpin
structured_simple
mir-942
miRNA2
hairpin
structured_simple
mir-944
miRNA2
hairpin
structured_simple
mir-96
miRNA2
hairpin
structured_simple
mir-965
mir-965
hairpin
structured_simple
mir-969
miRNA2
hairpin
structured_simple
mir-981
miRNA2
hairpin
structured_simple
mir-983
miRNA2
hairpin
structured_simple
mir-987
miRNA2
hairpin
structured_simple
mir-988
miRNA2
hairpin
structured_simple
mir-995
miRNA2
hairpin
structured_simple
mir-996
miRNA2
hairpin
structured_simple
mir-999
miRNA2
hairpin
structured_simple
mir-BART1
miRNA2
hairpin
structured_simple
mir-BART12
miRNA2
hairpin
structured_simple
mir-BART15
miRNA2
hairpin
structured_simple
mir-BART17
miRNA2
hairpin
structured_simple
mir-BART2
miRNA2
hairpin
structured_simple
mir-BART20
miRNA2
hairpin
structured_simple
mir-BART3
miRNA2
hairpin
structured_simple
mir-BART5
miRNA2
hairpin
structured_simple
mir-BART7
miRNA2
hairpin
structured_simple
mir-BHRF1-1
miRNA2
hairpin
structured_simple
mir-BHRF1-2
miRNA2
hairpin
structured_simple
mir-BHRF1-3
miRNA2
hairpin
structured_simple
mir-iab-4
miRNA2
hairpin
structured_simple
mir-M7
miRNA2
hairpin
structured_simple
mir-TAR
miRNA2
hairpin
structured_simple
MNV_3UTR
MNV_3UTR
3H
structured_simple
Moco-II
Moco-II
hairpin
structured_simple
MOCO_RNA_motif
MOCO_RNA_motif
complex unclassified
structured_complex
MOSES4
MOSES4
4WJ
structured_simple
MPMV_package
MPMV_package
complex unclassified
structured_complex
mraW
mraW
hairpin
structured_simple
Ms1
Ms1
complex unclassified
structured_complex
MS2
MS2
hairpin
structured_simple
Ms_AS-1
Ms_AS-1
3H
structured_simple
Ms_AS-4
Ms_AS-4
2H
structured_simple
Ms_AS-5
Ms_AS-5
hairpin
structured_simple
Ms_AS-8
Ms_AS-8
2H
structured_simple
Ms_IGR-2
Ms_IGR-2
2H
structured_simple
Ms_IGR-4
Ms_IGR-4
hairpin
structured_simple
Ms_IGR-5
Ms_IGR-5
3H
structured_simple
Ms_IGR-7
Ms_IGR-7
2H
structured_simple
Ms_IGR-8
Ms_IGR-8
hairpin
structured_simple
msiK
msiK
hairpin
structured_simple
msr
msr
hairpin
structured_simple
mtDNA_ssA
mtDNA_ssA
4WJ
structured_simple
MtlS
MtlS
3WJ
structured_simple
mtPerm-5S
5S_rRNA
rRNA
structured_complex
mt-tmRNA
tRNA
tRNA-like
structured_simple
mycoplasma_FSE
mycoplasma_FSE
hairpin
structured_simple
naRNA4
naRNA3
2H
structured_simple
NBR2
NBR2
hairpin
structured_simple
ncr1015
ncr1015
2H
structured_simple
ncr1175
ncr1175
2H
structured_simple
ncr1241
ncr1241
2H
structured_simple
ncr1575
ncr1575
3H
structured_simple
ncr952
ncr952
4H
structured_simple
ncr982
ncr982
2H
structured_simple
ncrMT1302
ncrMT1302
3WJ
structured_simple
NCRUPAR_1
NCRUPAR_1
hairpin
structured_simple
NCRUPAR_2
NCRUPAR_2
2H
structured_simple
ncRv12659
ncRv12659
3H
structured_simple
Ncrwmel02
Ncrwmel02
complex unclassified
structured_complex
NEAT1_1
NEAT1_1
4WJ
structured_simple
NEAT1_2
NEAT1_2
3H
structured_simple
NEAT1_3
NEAT1_3
multiple_domains
structured_complex
neisseria_FSE
neisseria_FSE
hairpin
structured_simple
NiCo
NiCo
4WJ
structured_simple
Noro_CRE
Noro_CRE
hairpin
structured_simple
nos_TCE
nos_TCE
3WJ
structured_simple
NPPA-AS1_1
NPPA-AS1_1
multiple_domains
structured_complex
NPPA-AS1_2
NPPA-AS1_2
multiple_domains
structured_complex
NPPA-AS1_3
NPPA-AS1_3
3WJ
structured_simple
NRF2_IRES
NRF2_IRES
4H
structured_simple
NRON
NRON
complex unclassified
structured_complex
NrrF
NrrF
2H
structured_simple
NrsZ
NrsZ
complex unclassified
structured_complex
nse_sRNA
nse_sRNA
2H
structured_simple
NsiR1
NsiR1
2H
structured_simple
NsiR4
NsiR4
2H
structured_simple
NsiR8
NsiR8
3H
structured_simple
NsiR9
NsiR9
3H
structured_simple
nuoG
nuoG
hairpin
structured_simple
Ocean-V
Ocean-V
2H
structured_simple
ODC_IRES
ODC_IRES
2H
structured_simple
ohsC_RNA
ohsC_RNA
2H
structured_simple
OLE
OLE
complex unclassified
structured_complex
OmrA-B
OmrA-B
2H
structured_simple
OppA_thermometer
OppA_thermometer
complex unclassified
structured_complex
OrzO-P
OrzO-P
2H
structured_simple
Oskar_OES
Oskar_OES
hairpin
structured_simple
ovine_lenti_FSE
ovine_lenti_FSE
complex unclassified
structured_complex
OxyS
OxyS
3H
structured_simple
P1
P1
2H
structured_simple
P10
P10
3WJ
structured_simple
P11
P11
4WJ
structured_simple
P13
P13
3H
structured_simple
P14
P14
3H
structured_simple
P15
P15
4H
structured_simple
P16
P16
3WJ
structured_simple
P17
P17
complex unclassified
structured_complex
P18
P18
3WJ
structured_simple
P2
P2
3WJ
structured_simple
P24
P24
complex unclassified
structured_complex
P26
P26
2H
structured_simple
P27
P27
4WJ
structured_simple
p27_CRE
p27_CRE
2H
structured_simple
P31
P31
2H
structured_simple
P33
P33
complex unclassified
structured_complex
P34
P34
complex unclassified
structured_complex
P35
P35
2H
structured_simple
P36
P36
2H
structured_simple
P37
P37
2H
structured_simple
P4
P4
complex unclassified
structured_complex
P5
P5
3H
structured_simple
P6
P6
complex unclassified
structured_complex
P8
P8
2H
structured_simple
P9
P9
2H
structured_simple
pan
pan
2H
structured_simple
Parecho_CRE
Parecho_CRE
complex unclassified
structured_complex
PART1_1
PART1_1
3H
structured_simple
PART1_2
PART1_2
complex unclassified
structured_complex
PART1_3
PART1_3
3H
structured_simple
PCA3_2
PCA3_2
complex unclassified
structured_complex
PCGEM1
PCGEM1
multiple_domains
structured_complex
Pedo-repair
Pedo-repair
complex unclassified
structured_complex
PepN_thermometer
PepN_thermometer
2H
structured_simple
pfl
pfl
3WJ
structured_simple
Phage_pRNA
Phage_pRNA
complex unclassified
structured_complex
Phe_leader
Phe_leader
hairpin
structured_simple
PhotoRC-I
PhotoRC-I
2H
structured_simple
PhotoRC-II
PhotoRC-II
2H
structured_simple
PhrS
PhrS
complex unclassified
structured_complex
Pinc
Pinc
multiple_domains
structured_complex
PinT
PinT
2H
structured_simple
PISRT1
PISRT1
2H
structured_simple
Pistol
Pistol
complex unclassified
structured_complex
PK1-TEV_CVMV
PK1-TEV_CVMV
pseudoknot_simple
structured_simple
PK-BYV
PK-BYV
pseudoknot_simple
structured_simple
PK-CuYV_BPYV
PK-CuYV_BPYV
complex unclassified
structured_complex
PK-HAV
PK-HAV
pseudoknot_simple
structured_simple
PK-IAV
PK-IAV
pseudoknot_simple
structured_simple
PK-PYVV
PK-PYVV
complex unclassified
structured_complex
PK-repBA
PK-repBA
hairpin
structured_simple
PK-repZ
PK-repZ
pseudoknot_simple
structured_simple
PK-SPCSV
PK-SPCSV
complex unclassified
structured_complex
Plant_SRP
SRP
SRP
structured_complex
Plant_U3
C/D-box
hairpin
structured_simple
Plasmid_R1162
Plasmid_R1162
2H
structured_simple
Plasmid_RNAIII
Plasmid_RNAIII
4H
structured_simple
plasmodium_snoR11
H/ACA-box
2H
structured_simple
plasmodium_snoR14
C/D-box
hairpin
structured_simple
plasmodium_snoR16
C/D-box
hairpin
structured_simple
plasmodium_snoR17
C/D-box
hairpin
structured_simple
plasmodium_snoR20
C/D-box
hairpin
structured_simple
plasmodium_snoR21
C/D-box
hairpin
structured_simple
plasmodium_snoR24
C/D-box
hairpin
structured_simple
plasmodium_snoR26
C/D-box
hairpin
structured_simple
plasmodium_snoR27
H/ACA-box
2H
structured_simple
plasmodium_snoR28
C/D-box
hairpin
structured_simple
plasmodium_snoR30
C/D-box
hairpin
structured_simple
plasmodium_snoR31
H/ACA-box
2H
structured_simple
pntA
pntA
2H
structured_simple
Polynucleobacter-1
Polynucleobacter-1
complex unclassified
structured_complex
Pospi_RY
Pospi_RY
hairpin
structured_simple
potC
potC
hairpin
structured_simple
Pox_AX_element
Pox_AX_element
2H
structured_simple
ppoRNA
5S_rRNA
rRNA
structured_complex
PreQ1
PreQ1
hairpin
structured_simple
preQ1-II
preQ1-II
3H
structured_simple
PreQ1-III
PreQ1-III
3WJ
structured_simple
PrfA
PrfA
hairpin
structured_simple
Prion_pknot
Prion_pknot
hairpin
structured_simple
pRNA
pRNA
hairpin
structured_simple
Protozoa_SRP
SRP
SRP
structured_complex
PrrB_RsmZ
Csr_Rsm_clan
complex unclassified
structured_complex
PrrF
PrrF
4H
structured_simple
psaA
psaA
complex unclassified
structured_complex
psbNH
psbNH
hairpin
structured_simple
Pseudomon-1
Pseudomon-1
2H
structured_simple
Pseudomon-groES
Pseudomon-groES
complex unclassified
structured_complex
Pseudomon-Rho
Pseudomon-Rho
2H
structured_simple
PsiU1-6
H/ACA-box
2H
structured_simple
PsiU2-35.45
H/ACA-box
2H
structured_simple
PsiU2-38.40.42
H/ACA-box
2H
structured_simple
PsiU2-55
H/ACA-box
2H
structured_simple
PsiU6-40
H/ACA-box
2H
structured_simple
psm_mec_RNA
psm_mec_RNA
2H
structured_simple
psRNA14
psRNA14
3WJ
structured_simple
psRNA2
psRNA2
complex unclassified
structured_complex
psRNA6
psRNA6
complex unclassified
structured_complex
PsrR1
PsrR1
hairpin
structured_simple
PtaRNA1
PtaRNA1
2H
structured_simple
purD
purD
2H
structured_simple
Purine
Purine
3WJ
structured_simple
PutA_thermometer
PutA_thermometer
3H
structured_simple
PVT1_1
PVT1_1
complex unclassified
structured_complex
PVT1_2
PVT1_2
complex unclassified
structured_complex
PVT1_3
PVT1_3
3H
structured_simple
PVT1_4
PVT1_4
complex unclassified
structured_complex
PVT1_5
PVT1_5
2H
structured_simple
PVT1_6
PVT1_6
3WJ
structured_simple
PVT1_7
PVT1_7
3H
structured_simple
PVX_3
PVX_3
2H
structured_simple
Pxr
Pxr
3H
structured_simple
PYLIS_1
PYLIS_1
hairpin
structured_simple
PYLIS_2
PYLIS_2
2H
structured_simple
PYLIS_3
PYLIS_3
4H
structured_simple
PYLIS_4
PYLIS_4
2H
structured_simple
PYLIS_5
PYLIS_5
2H
structured_simple
PYLIS_6
PYLIS_6
hairpin
structured_simple
PyrC_leader
PyrC_leader
hairpin
structured_simple
PyrD_leader
PyrD_leader
hairpin
structured_simple
PyrG_leader
PyrG_leader
hairpin
structured_simple
Pyrobac-1
Pyrobac-1
hairpin
structured_simple
PyrR
PyrR
3H
structured_simple
Qrr
Qrr
3H
structured_simple
R2_retro_el
R2_retro_el
3WJ
structured_simple
radC
radC
4H
structured_simple
RAGATH-13
RAGATH-13
3WJ
structured_simple
RAGATH-5
RAGATH-5
pseudoknot_simple
structured_simple
RAGATH-6
RAGATH-6
complex unclassified
structured_complex
RAGATH-8
RAGATH-8
complex unclassified
structured_complex
RalA
RalA
complex unclassified
structured_complex
RatA
RatA
2H
structured_simple
RCNMV_5UTR
RCNMV_5UTR
4H
structured_simple
RCNMV_TE_DR1
RCNMV_TE_DR1
complex unclassified
structured_complex
RcsR1
RcsR1
3H
structured_simple
rdlD
rdlD
hairpin
structured_simple
REN-SRE
REN-SRE
hairpin
structured_simple
Retro_dr1
Retro_dr1
2H
structured_simple
Rev11
Rev11
complex unclassified
structured_complex
Rev13
Rev13
complex unclassified
structured_complex
Rev24
Rev24
complex unclassified
structured_complex
Rev39_5p_UTR
Rev39_5p_UTR
complex unclassified
structured_complex
Rev41
Rev41
complex unclassified
structured_complex
Rev42_5p_UTR
Rev42_5p_UTR
complex unclassified
structured_complex
Rev44
Rev44
complex unclassified
structured_complex
Rev72
Rev72
complex unclassified
structured_complex
RFPL3-AS1_1
RFPL3-AS1_1
3WJ
structured_simple
RFPL3-AS1_2
RFPL3-AS1_2
2H
structured_simple
RF_site1
RF_site1
hairpin
structured_simple
RF_site2
RF_site2
pseudoknot_simple
structured_simple
RF_site3
RF_site3
pseudoknot_simple
structured_simple
RF_site4
RF_site4
pseudoknot_simple
structured_simple
RF_site5
RF_site5
pseudoknot_simple
structured_simple
RF_site6
RF_site6
pseudoknot_simple
structured_simple
RF_site8
RF_site8
pseudoknot_simple
structured_simple
RF_site9
RF_site9
pseudoknot_simple
structured_simple
Rhino_CRE
Rhino_CRE
hairpin
structured_simple
Rhizobiales-2
Rhizobiales-2
3H
structured_simple
RhlA_thermometer
RhlA_thermometer
3WJ
structured_simple
rhtB
rhtB
hairpin
structured_simple
Ricks_sRNA10
Ricks_sRNA10
complex unclassified
structured_complex
rimP
rimP
2H
structured_simple
rivX
rivX
complex unclassified
structured_complex
rli22
rli22
2H
structured_simple
rli23
rli23
3WJ
structured_simple
rli24
rli24
complex unclassified
structured_complex
rli26
rli26
complex unclassified
structured_complex
rli27
rli27
3WJ
structured_simple
rli28
rli28
3WJ
structured_simple
rli31
rli31
hairpin
structured_simple
rli32
rli32
complex unclassified
structured_complex
rli33
rli33
complex unclassified
structured_complex
rli34
rli34
2H
structured_simple
rli36
rli36
2H
structured_simple
rli37
rli37
complex unclassified
structured_complex
rli38
rli38
3WJ
structured_simple
rli40
rli40
complex unclassified
structured_complex
rli41
rli41
complex unclassified
structured_complex
rli42
rli42
complex unclassified
structured_complex
rli43
rli43
complex unclassified
structured_complex
rli45
rli45
3WJ
structured_simple
rli47
rli47
complex unclassified
structured_complex
rli48
rli48
3WJ
structured_simple
rli49
rli49
3WJ
structured_simple
rli51
rli51
3WJ
structured_simple
rli52
rli52
3H
structured_simple
rli53
rli53
3WJ
structured_simple
rli54
rli54
complex unclassified
structured_complex
rli56
rli56
3WJ
structured_simple
rli59
rli59
3WJ
structured_simple
rli60
rli60
3WJ
structured_simple
rli61
rli61
2H
structured_simple
rli62
rli62
complex unclassified
structured_complex
rliA
rliA
complex unclassified
structured_complex
rliB
rliB
3WJ
structured_simple
rliD
rliD
complex unclassified
structured_complex
rliE
rliE
complex unclassified
structured_complex
rliF
rliF
complex unclassified
structured_complex
rliG
rliG
complex unclassified
structured_complex
rliH
rliH
complex unclassified
structured_complex
rliI
rliI
complex unclassified
structured_complex
RmaA
RmaA
2H
structured_simple
rmf
rmf
4H
structured_simple
RMST_1
RMST_1
hairpin
structured_simple
RMST_10
RMST_10
3H
structured_simple
RMST_2
RMST_2
complex unclassified
structured_complex
RMST_3
RMST_3
hairpin
structured_simple
RMST_4
RMST_4
2H
structured_simple
RMST_5
RMST_5
4H
structured_simple
RMST_6
RMST_6
complex unclassified
structured_complex
RMST_7
RMST_7
complex unclassified
structured_complex
RMST_8
RMST_8
3H
structured_simple
RMST_9
RMST_9
multiple_domains
structured_complex
RnaG
RnaG
4WJ
structured_simple
RNAI
RNAI
3H
structured_simple
RNAIII
RNAIII
complex unclassified
structured_complex
RNA-OUT
RNA-OUT
hairpin
structured_simple
RNase_MRP
RNaseP
RNaseP
structured_complex
RNase_P
RNaseP
RNaseP
structured_complex
RNaseP_arch
RNaseP
RNaseP
structured_complex
RNaseP_bact_a
RNaseP
RNaseP
structured_complex
RNaseP_bact_b
RNaseP
RNaseP
structured_complex
RNaseP_nuc
RNaseP
RNaseP
structured_complex
RNaseP-T
RNaseP
RNaseP
structured_complex
rncO
rncO
3H
structured_simple
rne5
rne5
complex unclassified
structured_complex
rne-II
rne-II
complex unclassified
structured_complex
rnk_leader
rnk_leader
2H
structured_simple
rnk_pseudo
rnk_pseudo
2H
structured_simple
ROSE
ROSE
3H
structured_simple
ROSE_2
ROSE_2
2H
structured_simple
ROSE_3
ROSE_3
2H
structured_simple
Rota_CRE
Rota_CRE
hairpin
structured_simple
rox1
rox1
hairpin
structured_simple
rox2
rox2
hairpin
structured_simple
RprA
RprA
4H
structured_simple
rpsB
rpsB
3WJ
structured_simple
rpsL_psuedo
rpsL_psuedo
4H
structured_simple
rpsL_ricks
rpsL_ricks
3H
structured_simple
RRE
RRE
complex unclassified
structured_complex
RsaA
RsaA
3H
structured_simple
RsaB
RsaB
3H
structured_simple
RsaC
RsaC
complex unclassified
structured_complex
RsaD
RsaD
4H
structured_simple
RsaE
RsaE
3H
structured_simple
RsaF
RsaF
3H
structured_simple
RsaH
RsaH
complex unclassified
structured_complex
RsaJ
RsaJ
complex unclassified
structured_complex
RsaOG
RsaOG
complex unclassified
structured_complex
rseX
rseX
2H
structured_simple
rsmX
Csr_Rsm_clan
complex unclassified
structured_complex
RsmY
Csr_Rsm_clan
complex unclassified
structured_complex
rspL
rspL
3WJ
structured_simple
RSV_PBS
RSV_PBS
hairpin
structured_simple
RSV_RNA
RSV_RNA
complex unclassified
structured_complex
RtT
RtT
3WJ
structured_simple
Rubella_3
Rubella_3
2H
structured_simple
RUF1
RUF1
complex unclassified
structured_complex
RUF2
RUF2
2H
structured_simple
RUF20
RUF20
complex unclassified
structured_complex
RUF21
RUF21
complex unclassified
structured_complex
RUF3
RUF3
3WJ
structured_simple
RUF4
RUF4
complex unclassified
structured_complex
RUF6-5
RUF6-5
3WJ
structured_simple
RybB
RybB
hairpin
structured_simple
rydB
rydB
3WJ
structured_simple
RydC
RydC
pseudoknot_simple
structured_simple
ryfA
ryfA
complex unclassified
structured_complex
RyhB
RyhB
2H
structured_simple
S15
S15
2H
structured_simple
s2m
s2m
hairpin
structured_simple
Sacc_telomerase
Telomerase
telomerase
structured_complex
sagA
sagA
complex unclassified
structured_complex
SAH_riboswitch
SAH_riboswitch
hairpin
structured_simple
SAM
SAM
3WJ
structured_simple
SAM_alpha
SAM_alpha
hairpin
structured_simple
SAM-Chlorobi
SAM-Chlorobi
2H
structured_simple
SAM-II_long_loops
SAM-II_long_loops
pseudoknot_simple
structured_simple
SAM-I-IV-variant
SAM
3WJ
structured_simple
SAM-IV
SAM
3WJ
structured_simple
SAM-SAH
SAM-SAH
hairpin
structured_simple
SAM_V
SAM_V
hairpin
structured_simple
sar
sar
2H
structured_simple
SAR11_0636
SAR11_0636
3WJ
structured_simple
satBaMV_CRE
satBaMV_CRE
4WJ
structured_simple
sau-13
sau-13
3WJ
structured_simple
sau-19
sau-19
hairpin
structured_simple
sau-27
sau-27
2H
structured_simple
sau-30
sau-30
hairpin
structured_simple
sau-31
sau-31
hairpin
structured_simple
sau-41
sau-41
3WJ
structured_simple
sau-53
sau-53
complex unclassified
structured_complex
sau-59
sau-59
3WJ
structured_simple
sau-5949
sau-5949
hairpin
structured_simple
sau-5971
sau-5971
3H
structured_simple
sau-6072
sau-6072
2H
structured_simple
sau-63
sau-63
4H
structured_simple
sau-66
sau-66
3WJ
structured_simple
sbcD
sbcD
complex unclassified
structured_complex
sbrA
sbrA
2H
structured_simple
SBRMV1_UPD-PKd
SBRMV1_UPD-PKd
pseudoknot_simple
structured_simple
SBRMV1_UPD-PKf
SBRMV1_UPD-PKf
pseudoknot_simple
structured_simple
SBWMV1_UPD-PKb
SBWMV1_UPD-PKb
pseudoknot_simple
structured_simple
SBWMV1_UPD-PKe
SBWMV1_UPD-PKe
pseudoknot_simple
structured_simple
SBWMV1_UPD-PKh
SBWMV1_UPD-PKh
pseudoknot_simple
structured_simple
SBWMV2_UPD-PKb
SBWMV2_UPD-PKb
pseudoknot_simple
structured_simple
SBWMV2_UPD-PKk
SBWMV2_UPD-PKk
pseudoknot_simple
structured_simple
SBWMV2_UPD-PKl
SBWMV2_UPD-PKl
pseudoknot_simple
structured_simple
scaDm46E3
H/ACA-box
2H
structured_simple
sca_ncR14
H/ACA-box
2H
structured_simple
sca_ncR20
H/ACA-box
2H
structured_simple
sca_ncR21
H/ACA-box
2H
structured_simple
sca_ncR26
H/ACA-box
2H
structured_simple
sca_ncR27
H/ACA-box
2H
structured_simple
SCARNA1
H/ACA-box
2H
structured_simple
SCARNA11
H/ACA-box
2H
structured_simple
SCARNA13
H/ACA-box
2H
structured_simple
SCARNA14
H/ACA-box
2H
structured_simple
SCARNA15
H/ACA-box
2H
structured_simple
SCARNA16
H/ACA-box
2H
structured_simple
SCARNA17
C/D-box
hairpin
structured_simple
SCARNA18
C/D-box
hairpin
structured_simple
SCARNA2
C/D-box
hairpin
structured_simple
SCARNA20
H/ACA-box
2H
structured_simple
SCARNA21
H/ACA-box
2H
structured_simple
SCARNA23
H/ACA-box
2H
structured_simple
SCARNA24
H/ACA-box
2H
structured_simple
SCARNA3
H/ACA-box
2H
structured_simple
SCARNA4
H/ACA-box
2H
structured_simple
SCARNA6
H/ACA-box
2H
structured_simple
SCARNA7
C/D-box
hairpin
structured_simple
SCARNA8
H/ACA-box
2H
structured_simple
scr4677
scr4677
complex unclassified
structured_complex
scr5239
scr5239
complex unclassified
structured_complex
SdsR_RyeB
RyeA-RyeB
3H
structured_simple
SECIS_1
SECIS_1
hairpin
structured_simple
SECIS_2
SECIS_2
hairpin
structured_simple
SECIS_3
SECIS_3
hairpin
structured_simple
SECIS_4
SECIS_4
hairpin
structured_simple
SECIS_5
SECIS_5
hairpin
structured_simple
S-element
S-element
hairpin
structured_simple
serC
serC
2H
structured_simple
Sernc350
Sernc350
complex unclassified
structured_complex
Sernc389
Sernc389
complex unclassified
structured_complex
SgrS
SgrS
complex unclassified
structured_complex
shuA_thermo
shuA_thermo
hairpin
structured_simple
SIB_RNA
SIB_RNA
4WJ
structured_simple
Six3os1_1
Six3os1_1
3WJ
structured_simple
Six3os1_2
Six3os1_2
3WJ
structured_simple
Six3os1_3
Six3os1_3
2H
structured_simple
Six3os1_4
Six3os1_4
multiple_domains
structured_complex
Six3os1_5
Six3os1_5
complex unclassified
structured_complex
Six3os1_6
Six3os1_6
3WJ
structured_simple
Six3os1_7
Six3os1_7
complex unclassified
structured_complex
SL1
SL
3H
structured_simple
SL2
SL
3H
structured_simple
SMAD5-AS1_1
SMAD5-AS1_1
complex unclassified
structured_complex
SMAD5-AS1_2
SMAD5-AS1_2
complex unclassified
structured_complex
SMAD5-AS1_3
SMAD5-AS1_3
3WJ
structured_simple
SMAD5-AS1_4
SMAD5-AS1_4
4WJ
structured_simple
SMCR2_1
SMCR2_1
complex unclassified
structured_complex
SMCR2_2
SMCR2_2
complex unclassified
structured_complex
SMK_box_riboswitch
SMK_box_riboswitch
3WJ
structured_simple
SmY
SmY
2H
structured_simple
sn1185
C/D-box
hairpin
structured_simple
sn1502
C/D-box
hairpin
structured_simple
sn2317
C/D-box
hairpin
structured_simple
sn2343
C/D-box
hairpin
structured_simple
sn2417
C/D-box
hairpin
structured_simple
sn2429
C/D-box
hairpin
structured_simple
sn2524
C/D-box
hairpin
structured_simple
sn2841
C/D-box
hairpin
structured_simple
sn2903
C/D-box
hairpin
structured_simple
sn2991
C/D-box
hairpin
structured_simple
sn3060
C/D-box
hairpin
structured_simple
sn3071
C/D-box
hairpin
structured_simple
sn668
C/D-box
hairpin
structured_simple
snaR-A
snaR-A
hairpin
structured_simple
snoCD11
C/D-box
hairpin
structured_simple
snoF1_F2
H/ACA-box
2H
structured_simple
snoJ26
C/D-box
hairpin
structured_simple
snoJ33
C/D-box
hairpin
structured_simple
snoM1
H/ACA-box
2H
structured_simple
snoMBII-202
C/D-box
hairpin
structured_simple
snoMe18S-Gm1358
C/D-box
hairpin
structured_simple
snoMe18S-Um1356
C/D-box
hairpin
structured_simple
snoMe28S-Am2589
C/D-box
hairpin
structured_simple
snoMe28S-Am2634
C/D-box
hairpin
structured_simple
snoMe28S-Am982
C/D-box
hairpin
structured_simple
snoMe28S-Cm2645
C/D-box
hairpin
structured_simple
snoMe28S-Cm3227
C/D-box
hairpin
structured_simple
snoMe28S-Cm788
C/D-box
hairpin
structured_simple
snoMe28S-G3255
C/D-box
hairpin
structured_simple
snoMe28S-Gm1083
C/D-box
hairpin
structured_simple
snoMe28S-Gm3113
C/D-box
hairpin
structured_simple
snoMe28S-U3344
C/D-box
hairpin
structured_simple
sno_ncR1
H/ACA-box
2H
structured_simple
sno_ncR3
C/D-box
hairpin
structured_simple
sno_ncR4
C/D-box
hairpin
structured_simple
snopsi18S-1377
H/ACA-box
2H
structured_simple
snopsi18S-1854
H/ACA-box
2H
structured_simple
snopsi18S-841
H/ACA-box
2H
structured_simple
snopsi28S-1192
H/ACA-box
2H
structured_simple
snopsi28S-2876
H/ACA-box
2H
structured_simple
snopsi28S-3316
H/ACA-box
2H
structured_simple
snopsi28S-3327
H/ACA-box
2H
structured_simple
snopsi28S-3378
H/ACA-box
2H
structured_simple
snoPyro_CD
C/D-box
hairpin
structured_simple
snoR01
C/D-box
hairpin
structured_simple
snoR03
H/ACA-box
2H
structured_simple
snoR07
C/D-box
hairpin
structured_simple
snoR09
C/D-box
hairpin
structured_simple
snoR1
C/D-box
hairpin
structured_simple
snoR10
C/D-box
hairpin
structured_simple
snoR100
H/ACA-box
2H
structured_simple
snoR101
C/D-box
hairpin
structured_simple
snoR103
H/ACA-box
2H
structured_simple
snoR104
H/ACA-box
2H
structured_simple
snoR109
H/ACA-box
2H
structured_simple
snoR11
C/D-box
hairpin
structured_simple
snoR110
H/ACA-box
2H
structured_simple
snoR111
H/ACA-box
2H
structured_simple
snoR113
C/D-box
hairpin
structured_simple
snoR114
C/D-box
hairpin
structured_simple
snoR116
C/D-box
hairpin
structured_simple
snoR117
C/D-box
hairpin
structured_simple
snoR118
C/D-box
hairpin
structured_simple
snoR12
C/D-box
hairpin
structured_simple
snoR120
C/D-box
hairpin
structured_simple
snoR121
C/D-box
hairpin
structured_simple
snoR122
C/D-box
hairpin
structured_simple
snoR124
C/D-box
hairpin
structured_simple
snoR125
C/D-box
hairpin
structured_simple
snoR126
C/D-box
hairpin
structured_simple
snoR127
C/D-box
hairpin
structured_simple
snoR128
C/D-box
hairpin
structured_simple
snoR13
C/D-box
hairpin
structured_simple
snoR130
C/D-box
hairpin
structured_simple
snoR134
H/ACA-box
2H
structured_simple
snoR135
H/ACA-box
2H
structured_simple
snoR136
H/ACA-box
2H
structured_simple
snoR137
H/ACA-box
2H
structured_simple
snoR138
H/ACA-box
2H
structured_simple
snoR14
C/D-box
hairpin
structured_simple
snoR143
H/ACA-box
2H
structured_simple
snoR144
H/ACA-box
2H
structured_simple
snoR145
H/ACA-box
2H
structured_simple
snoR15
C/D-box
hairpin
structured_simple
snoR16
C/D-box
hairpin
structured_simple
snoR160
C/D-box
hairpin
structured_simple
snoR17
C/D-box
hairpin
structured_simple
snoR18
C/D-box
hairpin
structured_simple
snoR19
C/D-box
hairpin
structured_simple
snoR2
H/ACA-box
2H
structured_simple
snoR20
C/D-box
hairpin
structured_simple
snoR20a
C/D-box
hairpin
structured_simple
snoR21
C/D-box
hairpin
structured_simple
snoR22
C/D-box
hairpin
structured_simple
snoR23
C/D-box
hairpin
structured_simple
snoR24
C/D-box
hairpin
structured_simple
snoR25
C/D-box
hairpin
structured_simple
snoR26
C/D-box
hairpin
structured_simple
snoR27
C/D-box
hairpin
structured_simple
snoR28
C/D-box
hairpin
structured_simple
snoR29
C/D-box
hairpin
structured_simple
snoR30
C/D-box
hairpin
structured_simple
snoR31
C/D-box
hairpin
structured_simple
snoR31_Z110_Z27
C/D-box
hairpin
structured_simple
snoR32_R81
C/D-box
hairpin
structured_simple
snoR35
C/D-box
hairpin
structured_simple
snoR38
C/D-box
hairpin
structured_simple
snoR4
C/D-box
hairpin
structured_simple
snoR41
C/D-box
hairpin
structured_simple
snoR43
C/D-box
hairpin
structured_simple
snoR442
C/D-box
hairpin
structured_simple
snoR44_J54
C/D-box
hairpin
structured_simple
snoR4a
C/D-box
hairpin
structured_simple
snoR53
C/D-box
hairpin
structured_simple
snoR53Y
C/D-box
hairpin
structured_simple
snoR60
C/D-box
hairpin
structured_simple
snoR639
H/ACA-box
2H
structured_simple
snoR64
C/D-box
hairpin
structured_simple
snoR64a
C/D-box
hairpin
structured_simple
snoR66
C/D-box
hairpin
structured_simple
snoR69Y
C/D-box
hairpin
structured_simple
snoR71
C/D-box
hairpin
structured_simple
snoR72
C/D-box
hairpin
structured_simple
snoR74
H/ACA-box
2H
structured_simple
SNOR75
C/D-box
hairpin
structured_simple
snoR77
H/ACA-box
2H
structured_simple
snoR77Y
C/D-box
hairpin
structured_simple
snoR79
C/D-box
hairpin
structured_simple
snoR80
H/ACA-box
2H
structured_simple
snoR83
H/ACA-box
2H
structured_simple
snoR86
H/ACA-box
2H
structured_simple
snoR8a
C/D-box
hairpin
structured_simple
snoR9
C/D-box
hairpin
structured_simple
snoR97
H/ACA-box
2H
structured_simple
snoR98
H/ACA-box
2H
structured_simple
snoR99
H/ACA-box
2H
structured_simple
snoR9_plant
C/D-box
hairpin
structured_simple
SNORA1
H/ACA-box
2H
structured_simple
SNORA11
H/ACA-box
2H
structured_simple
SNORA12
H/ACA-box
2H
structured_simple
SNORA13
H/ACA-box
2H
structured_simple
SNORA14
H/ACA-box
2H
structured_simple
SNORA15
H/ACA-box
2H
structured_simple
SNORA16
H/ACA-box
2H
structured_simple
SNORA17
H/ACA-box
2H
structured_simple
SNORA18
H/ACA-box
2H
structured_simple
SNORA19
H/ACA-box
2H
structured_simple
SNORA2
H/ACA-box
2H
structured_simple
SNORA20
H/ACA-box
2H
structured_simple
SNORA21
H/ACA-box
2H
structured_simple
SNORA22
H/ACA-box
2H
structured_simple
SNORA23
H/ACA-box
2H
structured_simple
SNORA24
H/ACA-box
2H
structured_simple
SNORA25
H/ACA-box
2H
structured_simple
SNORA26
H/ACA-box
2H
structured_simple
SNORA27
H/ACA-box
2H
structured_simple
SNORA28
H/ACA-box
2H
structured_simple
SNORA29
H/ACA-box
2H
structured_simple
SNORA3
H/ACA-box
2H
structured_simple
SNORA30
H/ACA-box
2H
structured_simple
SNORA31
H/ACA-box
2H
structured_simple
SNORA32
H/ACA-box
2H
structured_simple
SNORA33
H/ACA-box
2H
structured_simple
SNORA35
H/ACA-box
2H
structured_simple
SNORA36
H/ACA-box
2H
structured_simple
SNORA38
H/ACA-box
2H
structured_simple
SNORA4
H/ACA-box
2H
structured_simple
SNORA40
H/ACA-box
2H
structured_simple
SNORA41
H/ACA-box
2H
structured_simple
SNORA42
H/ACA-box
2H
structured_simple
SNORA43
H/ACA-box
2H
structured_simple
SNORA44
H/ACA-box
2H
structured_simple
SNORA46
H/ACA-box
2H
structured_simple
SNORA47
H/ACA-box
2H
structured_simple
SNORA48
H/ACA-box
2H
structured_simple
SNORA49
H/ACA-box
2H
structured_simple
SNORA5
H/ACA-box
2H
structured_simple
SNORA50
H/ACA-box
2H
structured_simple
SNORA51
H/ACA-box
2H
structured_simple
SNORA52
H/ACA-box
2H
structured_simple
SNORA53
H/ACA-box
2H
structured_simple
SNORA54
H/ACA-box
2H
structured_simple
SNORA55
H/ACA-box
2H
structured_simple
SNORA56
H/ACA-box
2H
structured_simple
SNORA57
H/ACA-box
2H
structured_simple
SNORA58
H/ACA-box
2H
structured_simple
SNORA61
H/ACA-box
2H
structured_simple
SNORA62
H/ACA-box
2H
structured_simple
SNORA63
H/ACA-box
2H
structured_simple
SNORA64
H/ACA-box
2H
structured_simple
SNORA65
H/ACA-box
2H
structured_simple
SNORA66
H/ACA-box
2H
structured_simple
SNORA67
H/ACA-box
2H
structured_simple
SNORA68
H/ACA-box
2H
structured_simple
SNORA69
H/ACA-box
2H
structured_simple
SNORA7
H/ACA-box
2H
structured_simple
SNORA70
H/ACA-box
2H
structured_simple
SNORA71
H/ACA-box
2H
structured_simple
SNORA72
H/ACA-box
2H
structured_simple
SNORA73
H/ACA-box
2H
structured_simple
SNORA74
H/ACA-box
2H
structured_simple
SNORA75
H/ACA-box
2H
structured_simple
SNORA76
H/ACA-box
2H
structured_simple
SNORA77
H/ACA-box
2H
structured_simple
SNORA79
H/ACA-box
2H
structured_simple
SNORA8
H/ACA-box
2H
structured_simple
SNORA81
H/ACA-box
2H
structured_simple
SNORA84
H/ACA-box
2H
structured_simple
SNORA9
H/ACA-box
2H
structured_simple
SNORD10
C/D-box
hairpin
structured_simple
SNORD100
C/D-box
hairpin
structured_simple
SNORD101
C/D-box
hairpin
structured_simple
SNORD102
C/D-box
hairpin
structured_simple
SNORD103
C/D-box
hairpin
structured_simple
SNORD105
C/D-box
hairpin
structured_simple
SNORD107
C/D-box
hairpin
structured_simple
SNORD108
C/D-box
hairpin
structured_simple
SNORD109A
C/D-box
hairpin
structured_simple
SNORD11
C/D-box
hairpin
structured_simple
SNORD110
C/D-box
hairpin
structured_simple
SNORD111
C/D-box
hairpin
structured_simple
SNORD112
C/D-box
hairpin
structured_simple
SNORD113
C/D-box
hairpin
structured_simple
SNORD115
C/D-box
hairpin
structured_simple
SNORD116
C/D-box
hairpin
structured_simple
SNORD11B
C/D-box
hairpin
structured_simple
SNORD12
C/D-box
hairpin
structured_simple
SNORD121A
C/D-box
hairpin
structured_simple
SNORD123
C/D-box
hairpin
structured_simple
SNORD124
C/D-box
hairpin
structured_simple
SNORD125
C/D-box
hairpin
structured_simple
SNORD126
C/D-box
hairpin
structured_simple
SNORD127
C/D-box
hairpin
structured_simple
SNORD14
C/D-box
hairpin
structured_simple
SNORD15
C/D-box
hairpin
structured_simple
SNORD16
C/D-box
hairpin
structured_simple
SNORD17
C/D-box
hairpin
structured_simple
SNORD18
C/D-box
hairpin
structured_simple
SNORD19
C/D-box
hairpin
structured_simple
SNORD19B
C/D-box
hairpin
structured_simple
SNORD2
C/D-box
hairpin
structured_simple
SNORD20
C/D-box
hairpin
structured_simple
SNORD21
C/D-box
hairpin
structured_simple
SNORD22
C/D-box
hairpin
structured_simple
SNORD23
C/D-box
hairpin
structured_simple
SNORD24
C/D-box
hairpin
structured_simple
SNORD25
C/D-box
hairpin
structured_simple
SNORD26
C/D-box
hairpin
structured_simple
SNORD27
C/D-box
hairpin
structured_simple
SNORD28
C/D-box
hairpin
structured_simple
SNORD29
C/D-box
hairpin
structured_simple
SNORD30
C/D-box
hairpin
structured_simple
SNORD31
C/D-box
hairpin
structured_simple
SNORD33
C/D-box
hairpin
structured_simple
SNORD34
C/D-box
hairpin
structured_simple
SNORD35
C/D-box
hairpin
structured_simple
SNORD36
C/D-box
hairpin
structured_simple
SNORD37
C/D-box
hairpin
structured_simple
SNORD38
C/D-box
hairpin
structured_simple
SNORD39
C/D-box
hairpin
structured_simple
SNORD41
C/D-box
hairpin
structured_simple
SNORD42
C/D-box
hairpin
structured_simple
SNORD43
C/D-box
hairpin
structured_simple
SNORD44
C/D-box
hairpin
structured_simple
SNORD45
C/D-box
hairpin
structured_simple
SNORD46
C/D-box
hairpin
structured_simple
SNORD47
C/D-box
hairpin
structured_simple
SNORD48
C/D-box
hairpin
structured_simple
SNORD49
C/D-box
hairpin
structured_simple
SNORD5
C/D-box
hairpin
structured_simple
SNORD50
C/D-box
hairpin
structured_simple
SNORD51
C/D-box
hairpin
structured_simple
SNORD52
C/D-box
hairpin
structured_simple
SNORD53_SNORD92
C/D-box
hairpin
structured_simple
SNORD56
C/D-box
hairpin
structured_simple
SNORD57
C/D-box
hairpin
structured_simple
SNORD58
C/D-box
hairpin
structured_simple
SNORD59
C/D-box
hairpin
structured_simple
SNORD60
C/D-box
hairpin
structured_simple
SNORD61
C/D-box
hairpin
structured_simple
SNORD62
C/D-box
hairpin
structured_simple
SNORD63
C/D-box
hairpin
structured_simple
SNORD64
C/D-box
hairpin
structured_simple
SNORD65
C/D-box
hairpin
structured_simple
SNORD66
C/D-box
hairpin
structured_simple
SNORD67
C/D-box
hairpin
structured_simple
SNORD69
C/D-box
hairpin
structured_simple
SNORD70
C/D-box
hairpin
structured_simple
SNORD71
H/ACA-box
2H
structured_simple
SNORD72
C/D-box
hairpin
structured_simple
SNORD73
C/D-box
hairpin
structured_simple
SNORD74
C/D-box
hairpin
structured_simple
SNORD75
C/D-box
hairpin
structured_simple
SNORD77
C/D-box
hairpin
structured_simple
SNORD78
C/D-box
hairpin
structured_simple
SNORD79
C/D-box
hairpin
structured_simple
SNORD81
C/D-box
hairpin
structured_simple
SNORD82
C/D-box
hairpin
structured_simple
SNORD83
C/D-box
hairpin
structured_simple
SNORD86
C/D-box
hairpin
structured_simple
SNORD87
C/D-box
hairpin
structured_simple
SNORD88
C/D-box
hairpin
structured_simple
SNORD89
C/D-box
hairpin
structured_simple
SNORD90
C/D-box
hairpin
structured_simple
SNORD91
C/D-box
hairpin
structured_simple
SNORD93
C/D-box
hairpin
structured_simple
SNORD94
C/D-box
hairpin
structured_simple
SNORD95
C/D-box
hairpin
structured_simple
SNORD96
C/D-box
hairpin
structured_simple
SNORD97
C/D-box
hairpin
structured_simple
SNORD98
C/D-box
hairpin
structured_simple
SNORD99
C/D-box
hairpin
structured_simple
SNORND104
C/D-box
hairpin
structured_simple
snosnR48
C/D-box
hairpin
structured_simple
snosnR54
C/D-box
hairpin
structured_simple
snosnR55
C/D-box
hairpin
structured_simple
snosnR57
C/D-box
hairpin
structured_simple
snosnR60_Z15
C/D-box
hairpin
structured_simple
snosnR61
C/D-box
hairpin
structured_simple
snosnR64
C/D-box
hairpin
structured_simple
snosnR66
C/D-box
hairpin
structured_simple
snosnR69
C/D-box
hairpin
structured_simple
snosnR71
C/D-box
hairpin
structured_simple
snoTBR17
C/D-box
hairpin
structured_simple
snoTBR5
C/D-box
hairpin
structured_simple
snoTBR7
C/D-box
hairpin
structured_simple
snoU105B
C/D-box
hairpin
structured_simple
snoU109
H/ACA-box
2H
structured_simple
snoU13
C/D-box
hairpin
structured_simple
snoU18
C/D-box
hairpin
structured_simple
snoU19
H/ACA-box
2H
structured_simple
snoU2_19
C/D-box
hairpin
structured_simple
snoU2-30
C/D-box
hairpin
structured_simple
snoU25
C/D-box
hairpin
structured_simple
snoU30
C/D-box
hairpin
structured_simple
snoU31b
C/D-box
hairpin
structured_simple
snoU36a
C/D-box
hairpin
structured_simple
snoU43
C/D-box
hairpin
structured_simple
snoU49
C/D-box
hairpin
structured_simple
snoU54
C/D-box
hairpin
structured_simple
snoU61
C/D-box
hairpin
structured_simple
snoU6-47
C/D-box
hairpin
structured_simple
snoU6-53
C/D-box
hairpin
structured_simple
snoU82P
C/D-box
hairpin
structured_simple
snoU83
C/D-box
hairpin
structured_simple
snoU83B
C/D-box
hairpin
structured_simple
snoU83D
C/D-box
hairpin
structured_simple
snoU85
H/ACA-box
2H
structured_simple
snoU89
H/ACA-box
2H
structured_simple
snoZ101
C/D-box
hairpin
structured_simple
snoZ102_R77
C/D-box
hairpin
structured_simple
snoZ103
C/D-box
hairpin
structured_simple
snoZ105
C/D-box
hairpin
structured_simple
snoZ107_R87
C/D-box
hairpin
structured_simple
snoZ112
C/D-box
hairpin
structured_simple
snoZ118
C/D-box
hairpin
structured_simple
snoZ119
C/D-box
hairpin
structured_simple
snoZ122
C/D-box
hairpin
structured_simple
snoZ13_snr52
C/D-box
hairpin
structured_simple
snoZ152
C/D-box
hairpin
structured_simple
snoZ155
C/D-box
hairpin
structured_simple
snoZ157
C/D-box
hairpin
structured_simple
snoZ159
C/D-box
hairpin
structured_simple
snoZ161_228
C/D-box
hairpin
structured_simple
snoZ162
C/D-box
hairpin
structured_simple
snoZ163
C/D-box
hairpin
structured_simple
snoZ165
C/D-box
hairpin
structured_simple
snoZ168
C/D-box
hairpin
structured_simple
snoZ169
C/D-box
hairpin
structured_simple
snoZ17
C/D-box
hairpin
structured_simple
snoZ173
C/D-box
hairpin
structured_simple
snoZ175
C/D-box
hairpin
structured_simple
snoZ178
C/D-box
hairpin
structured_simple
snoZ182
C/D-box
hairpin
structured_simple
snoZ185
C/D-box
hairpin
structured_simple
snoZ188
C/D-box
hairpin
structured_simple
snoZ194
C/D-box
hairpin
structured_simple
snoZ196
C/D-box
hairpin
structured_simple
snoZ199
C/D-box
hairpin
structured_simple
snoZ206
C/D-box
hairpin
structured_simple
snoZ221_snoR21b
C/D-box
hairpin
structured_simple
snoZ223
C/D-box
hairpin
structured_simple
snoZ242
C/D-box
hairpin
structured_simple
snoZ247
C/D-box
hairpin
structured_simple
snoZ248
C/D-box
hairpin
structured_simple
snoZ256
C/D-box
hairpin
structured_simple
snoZ266
C/D-box
hairpin
structured_simple
snoZ267
C/D-box
hairpin
structured_simple
snoZ278
C/D-box
hairpin
structured_simple
snoZ279_R105_R108
C/D-box
hairpin
structured_simple
snoZ30
C/D-box
hairpin
structured_simple
snoZ30a
C/D-box
hairpin
structured_simple
snoZ39
C/D-box
hairpin
structured_simple
snoZ40
C/D-box
hairpin
structured_simple
snoZ43
C/D-box
hairpin
structured_simple
snoZ5
C/D-box
hairpin
structured_simple
snoZ6
C/D-box
hairpin
structured_simple
snoZ7
C/D-box
hairpin
structured_simple
sno_ZL1
C/D-box
hairpin
structured_simple
sno_ZL116
C/D-box
hairpin
structured_simple
sno_ZL2
C/D-box
hairpin
structured_simple
sno_ZL63
C/D-box
hairpin
structured_simple
sno_ZL8
C/D-box
hairpin
structured_simple
snR10
H/ACA-box
2H
structured_simple
snR11
H/ACA-box
2H
structured_simple
snR13
C/D-box
hairpin
structured_simple
snR161
H/ACA-box
2H
structured_simple
snR189
H/ACA-box
2H
structured_simple
snR190
C/D-box
hairpin
structured_simple
snR191
H/ACA-box
2H
structured_simple
snR3
H/ACA-box
2H
structured_simple
snR30
H/ACA-box
2H
structured_simple
snR31
H/ACA-box
2H
structured_simple
snR32
H/ACA-box
2H
structured_simple
snR33
H/ACA-box
2H
structured_simple
snR34
H/ACA-box
2H
structured_simple
snR35
H/ACA-box
2H
structured_simple
snR36
H/ACA-box
2H
structured_simple
snR37
H/ACA-box
2H
structured_simple
snR39
C/D-box
hairpin
structured_simple
snR4
C/D-box
hairpin
structured_simple
snR40
C/D-box
hairpin
structured_simple
snR41
C/D-box
hairpin
structured_simple
snR42
H/ACA-box
2H
structured_simple
snR43
H/ACA-box
2H
structured_simple
snR44
H/ACA-box
2H
structured_simple
snR45
C/D-box
hairpin
structured_simple
snR46
H/ACA-box
2H
structured_simple
snR47
C/D-box
hairpin
structured_simple
snR49
H/ACA-box
2H
structured_simple
snR5
H/ACA-box
2H
structured_simple
snR50
C/D-box
hairpin
structured_simple
snR51
C/D-box
hairpin
structured_simple
snR52
C/D-box
hairpin
structured_simple
snR56
C/D-box
hairpin
structured_simple
snR58
C/D-box
hairpin
structured_simple
snR62
C/D-box
hairpin
structured_simple
snR63
C/D-box
hairpin
structured_simple
snR65
C/D-box
hairpin
structured_simple
snR67
C/D-box
hairpin
structured_simple
snR68
C/D-box
hairpin
structured_simple
snR70
C/D-box
hairpin
structured_simple
snR73
C/D-box
hairpin
structured_simple
snR75
C/D-box
hairpin
structured_simple
snR76
C/D-box
hairpin
structured_simple
snR77
C/D-box
hairpin
structured_simple
snR78
C/D-box
hairpin
structured_simple
snR79
C/D-box
hairpin
structured_simple
snR8
H/ACA-box
2H
structured_simple
snR80
H/ACA-box
2H
structured_simple
snR81
H/ACA-box
2H
structured_simple
snR82
H/ACA-box
2H
structured_simple
snR83
H/ACA-box
2H
structured_simple
snR84
H/ACA-box
2H
structured_simple
snR85
H/ACA-box
2H
structured_simple
snR86
H/ACA-box
2H
structured_simple
snR87
C/D-box
hairpin
structured_simple
snR9
H/ACA-box
2H
structured_simple
sobemo_FSE
sobemo_FSE
hairpin
structured_simple
SodB_thermometer
SodB_thermometer
2H
structured_simple
SodC_thermometer
SodC_thermometer
3WJ
structured_simple
sok
sok
2H
structured_simple
SorY
SorY
3H
structured_simple
sot0042
sot0042
complex unclassified
structured_complex
sot2652
sot2652
complex unclassified
structured_complex
SOX2OT_exon1
SOX2OT_exon1
complex unclassified
structured_complex
SOX2OT_exon2
SOX2OT_exon2
2H
structured_simple
SOX2OT_exon3
SOX2OT_exon3
complex unclassified
structured_complex
SOX2OT_exon4
SOX2OT_exon4
4H
structured_simple
Spd-sr07
Spd-sr07
hairpin
structured_simple
Spd-sr37
Spd-sr37
hairpin
structured_simple
speF
speF
complex unclassified
structured_complex
SpF01_sRNA
SpF01_sRNA
hairpin
structured_simple
SpF03_sRNA
SpF03_sRNA
3WJ
structured_simple
SpF10_sRNA
SpF10_sRNA
3WJ
structured_simple
SpF11_sRNA
SpF11_sRNA
2H
structured_simple
SpF14_sRNA
SpF14_sRNA
3WJ
structured_simple
SpF19_sRNA
SpF19_sRNA
3WJ
structured_simple
SpF22_sRNA
SpF22_sRNA
3WJ
structured_simple
SpF25_sRNA
SpF25_sRNA
2H
structured_simple
SpF36_sRNA
SpF36_sRNA
hairpin
structured_simple
SpF39_sRNA
SpF39_sRNA
2H
structured_simple
SpF41_sRNA
SpF41_sRNA
3WJ
structured_simple
SpF43_sRNA
SpF43_sRNA
hairpin
structured_simple
SpF44_sRNA
SpF44_sRNA
3WJ
structured_simple
SpF51_sRNA
SpF51_sRNA
2H
structured_simple
SpF56_sRNA
SpF56_sRNA
hairpin
structured_simple
SpF59_sRNA
SpF59_sRNA
4WJ
structured_simple
SpF61_sRNA
SpF61_sRNA
hairpin
structured_simple
SpF66_sRNA
SpF66_sRNA
complex unclassified
structured_complex
Sphinx_1
Sphinx_1
complex unclassified
structured_complex
Sphinx_2
Sphinx_2
multiple_domains
structured_complex
Spi-1
Spi-1
complex unclassified
structured_complex
S_pombe_snR10
H/ACA-box
2H
structured_simple
S_pombe_snR100
H/ACA-box
2H
structured_simple
S_pombe_snR3
H/ACA-box
2H
structured_simple
S_pombe_snR33
H/ACA-box
2H
structured_simple
S_pombe_snR35
H/ACA-box
2H
structured_simple
S_pombe_snR36
H/ACA-box
2H
structured_simple
S_pombe_snR42
H/ACA-box
2H
structured_simple
S_pombe_snR46
H/ACA-box
2H
structured_simple
S_pombe_snR5
H/ACA-box
2H
structured_simple
S_pombe_snR90
H/ACA-box
2H
structured_simple
S_pombe_snR91
H/ACA-box
2H
structured_simple
S_pombe_snR92
H/ACA-box
2H
structured_simple
S_pombe_snR93
H/ACA-box
2H
structured_simple
S_pombe_snR94
H/ACA-box
2H
structured_simple
S_pombe_snR95
H/ACA-box
2H
structured_simple
S_pombe_snR96
H/ACA-box
2H
structured_simple
S_pombe_snR97
H/ACA-box
2H
structured_simple
S_pombe_snR98
H/ACA-box
2H
structured_simple
S_pombe_snR99
H/ACA-box
2H
structured_simple
Spot_42
Spot_42
3H
structured_simple
SpR08_sRNA
SpR08_sRNA
2H
structured_simple
SpR10_sRNA
SpR10_sRNA
hairpin
structured_simple
SpR14_sRNA
SpR14_sRNA
hairpin
structured_simple
SpR18_sRNA
SpR18_sRNA
3WJ
structured_simple
SpR19_sRNA
SpR19_sRNA
3WJ
structured_simple
SpR20_sRNA
SpR20_sRNA
2H
structured_simple
SprD
SprD
4H
structured_simple
SprX
SprX
complex unclassified
structured_complex
SPRY4-IT1_1
SPRY4-IT1_1
3WJ
structured_simple
SPRY4-IT1_2
SPRY4-IT1_2
complex unclassified
structured_complex
Spy1186876
Spy1186876
4H
structured_simple
Spy1786666
Spy1786666
2H
structured_simple
Spy392987
Spy392987
hairpin
structured_simple
Spy490380c
Spy490380c
3H
structured_simple
Spy490483c
Spy490483c
2H
structured_simple
Spy491311c
Spy491311c
3WJ
structured_simple
Spy491738
Spy491738
3H
structured_simple
Spy779816
Spy779816
2H
structured_simple
sR035
sR035
complex unclassified
structured_complex
sR084
sR084
2H
structured_simple
sR1
C/D-box
hairpin
structured_simple
SR1
SR1
3H
structured_simple
sR10
C/D-box
hairpin
structured_simple
sR11
C/D-box
hairpin
structured_simple
sR12
C/D-box
hairpin
structured_simple
sR14
C/D-box
hairpin
structured_simple
sR15
C/D-box
hairpin
structured_simple
sR16
C/D-box
hairpin
structured_simple
sR17
C/D-box
hairpin
structured_simple
sR18
C/D-box
hairpin
structured_simple
sR19
C/D-box
hairpin
structured_simple
sR2
C/D-box
hairpin
structured_simple
sR20
C/D-box
hairpin
structured_simple
sR21
C/D-box
hairpin
structured_simple
sR22
C/D-box
hairpin
structured_simple
sR23
C/D-box
hairpin
structured_simple
sR24
C/D-box
hairpin
structured_simple
sR28
C/D-box
hairpin
structured_simple
sR3
C/D-box
hairpin
structured_simple
sR30
C/D-box
hairpin
structured_simple
sR32
C/D-box
hairpin
structured_simple
sR33
C/D-box
hairpin
structured_simple
sR34
C/D-box
hairpin
structured_simple
sR35
C/D-box
hairpin
structured_simple
sR36
C/D-box
hairpin
structured_simple
sR38
C/D-box
hairpin
structured_simple
sR39
C/D-box
hairpin
structured_simple
sR4
C/D-box
hairpin
structured_simple
sR40
C/D-box
hairpin
structured_simple
sR41
C/D-box
hairpin
structured_simple
sR42
C/D-box
hairpin
structured_simple
sR43
C/D-box
hairpin
structured_simple
sR44
C/D-box
hairpin
structured_simple
sR45
C/D-box
hairpin
structured_simple
sR46
C/D-box
hairpin
structured_simple
sR47
C/D-box
hairpin
structured_simple
sR48
C/D-box
hairpin
structured_simple
sR49
C/D-box
hairpin
structured_simple
sR5
C/D-box
hairpin
structured_simple
sR51
C/D-box
hairpin
structured_simple
sR52
C/D-box
hairpin
structured_simple
sR53
C/D-box
hairpin
structured_simple
sR55
C/D-box
hairpin
structured_simple
sR58
C/D-box
hairpin
structured_simple
sR6
C/D-box
hairpin
structured_simple
sR60
C/D-box
hairpin
structured_simple
sR7
C/D-box
hairpin
structured_simple
sR9
C/D-box
hairpin
structured_simple
sraA
sraA
2H
structured_simple
SraB
SraB
4H
structured_simple
SraC_RyeA
RyeA-RyeB
3H
structured_simple
SraG
SraG
3H
structured_simple
sraL
sraL
complex unclassified
structured_complex
srg1
srg1
complex unclassified
structured_complex
sRNA-Xcc1
sRNA-Xcc1
3WJ
structured_simple
sroB
sroB
3H
structured_simple
sroC
sroC
3WJ
structured_simple
sroD
sroD
2H
structured_simple
sroE
sroE
2H
structured_simple
sroH
sroH
hairpin
structured_simple
sR-tMet
C/D-box
hairpin
structured_simple
SscA
SscA
hairpin
structured_simple
Ssr1
Ssr1
complex unclassified
structured_complex
SSRC10
SSRC10
3H
structured_simple
SSRC30
SSRC30
complex unclassified
structured_complex
SSRC34_1
SSRC34_1
2H
structured_simple
SSRC34_2
SSRC34_2
2H
structured_simple
SSRC38
SSRC38
complex unclassified
structured_complex
SSRC41
SSRC41
2H
structured_simple
SSRC8_1
SSRC8_1
3WJ
structured_simple
SSRC8_2
SSRC8_2
complex unclassified
structured_complex
SSU_rRNA_archaea
SSU_rRNA
rRNA
structured_complex
SSU_rRNA_bacteria
SSU_rRNA
rRNA
structured_complex
SSU_rRNA_eukarya
SSU_rRNA
rRNA
structured_complex
SSU_rRNA_microsporidia
SSU_rRNA
rRNA
structured_complex
SSU_trypano_mito
SSU_rRNA
rRNA
structured_complex
ST7-AS1_1
ST7-AS1_1
hairpin
structured_simple
ST7-AS1_2
ST7-AS1_2
3WJ
structured_simple
ST7-AS2_1
ST7-AS2_1
hairpin
structured_simple
ST7-AS2_2
ST7-AS2_2
2H
structured_simple
ST7-OT3_1
ST7-OT3_1
hairpin
structured_simple
ST7-OT3_2
ST7-OT3_2
2H
structured_simple
ST7-OT3_3
ST7-OT3_3
hairpin
structured_simple
ST7-OT3_4
ST7-OT3_4
hairpin
structured_simple
ST7-OT4_1
ST7-OT4_1
complex unclassified
structured_complex
ST7-OT4_2
ST7-OT4_2
3WJ
structured_simple
ST7-OT4_3
ST7-OT4_3
multiple_domains
structured_complex
ST7-OT4_4
ST7-OT4_4
3WJ
structured_simple
STAXI
STAXI
4H
structured_simple
STnc100
STnc100
complex unclassified
structured_complex
STnc130
STnc130
2H
structured_simple
STnc150
STnc150
3H
structured_simple
STnc170
STnc170
complex unclassified
structured_complex
STnc180
STnc180
4H
structured_simple
STnc210
STnc210
3WJ
structured_simple
STnc220
STnc220
3WJ
structured_simple
STnc230
STnc230
hairpin
structured_simple
STnc240
STnc240
2H
structured_simple
STnc250
STnc250
4H
structured_simple
STnc260
STnc260
3WJ
structured_simple
STnc280
STnc280
2H
structured_simple
STnc290
STnc290
2H
structured_simple
STnc30
STnc30
complex unclassified
structured_complex
STnc300
STnc300
4H
structured_simple
STnc310
STnc310
2H
structured_simple
STnc320
STnc320
hairpin
structured_simple
STnc340
STnc340
2H
structured_simple
STnc350
STnc350
2H
structured_simple
STnc361
STnc361
complex unclassified
structured_complex
STnc370
STnc370
2H
structured_simple
STnc380
STnc380
2H
structured_simple
STnc390
STnc390
2H
structured_simple
STnc40
STnc40
2H
structured_simple
STnc400
STnc400
2H
structured_simple
STnc410
STnc410
3H
structured_simple
STnc420
STnc420
hairpin
structured_simple
STnc430
STnc430
3H
structured_simple
STnc450
STnc450
2H
structured_simple
STnc460
STnc460
4H
structured_simple
STnc470
STnc470
complex unclassified
structured_complex
STnc480
STnc480
hairpin
structured_simple
STnc490
STnc490
3H
structured_simple
STnc50
STnc50
2H
structured_simple
STnc500
STnc500
complex unclassified
structured_complex
STnc510
STnc510
complex unclassified
structured_complex
STnc540
STnc540
3WJ
structured_simple
STnc550
STnc550
complex unclassified
structured_complex
STnc560
STnc560
4H
structured_simple
STnc590
STnc590
complex unclassified
structured_complex
STnc630
STnc630
complex unclassified
structured_complex
STnc70
STnc70
3H
structured_simple
StyR-143
StyR-143
4H
structured_simple
StyR-3
StyR-3
3WJ
structured_simple
StyR-44
StyR-44
2H
structured_simple
sucA
sucA
4WJ
structured_simple
sucA-II
sucA-II
complex unclassified
structured_complex
sucC
sucC
hairpin
structured_simple
suhB
suhB
2H
structured_simple
SurA
SurA
complex unclassified
structured_complex
SurC
SurC
3WJ
structured_simple
sX11
sX11
complex unclassified
structured_complex
sX12
sX12
2H
structured_simple
sX13
sX13
4H
structured_simple
sX14
sX14
4H
structured_simple
sX15
sX15
3WJ
structured_simple
sX2
sX2
3WJ
structured_simple
sX4
sX4
complex unclassified
structured_complex
sX5
sX5
hairpin
structured_simple
sX6
sX6
complex unclassified
structured_complex
sX7
sX7
3H
structured_simple
sX8
sX8
2H
structured_simple
sX9
sX9
3H
structured_simple
sxy
sxy
3WJ
structured_simple
symR
symR
2H
structured_simple
t44
t44
hairpin
structured_simple
TarA
TarA
3H
structured_simple
TarB
TarB
4H
structured_simple
TB10Cs1H1
H/ACA-box
2H
structured_simple
TB10Cs1H2
H/ACA-box
2H
structured_simple
TB10Cs1H3
H/ACA-box
2H
structured_simple
TB10Cs2H1
H/ACA-box
2H
structured_simple
TB10Cs2H2
H/ACA-box
2H
structured_simple
TB10Cs3H1
H/ACA-box
2H
structured_simple
TB10Cs3H2
H/ACA-box
2H
structured_simple
TB10Cs4H2
H/ACA-box
2H
structured_simple
TB10Cs4H3
H/ACA-box
2H
structured_simple
TB10Cs4H4
H/ACA-box
2H
structured_simple
TB10Cs5H2
H/ACA-box
2H
structured_simple
TB10Cs5H3
H/ACA-box
2H
structured_simple
TB11Cs2H1
H/ACA-box
2H
structured_simple
TB11Cs3H1
H/ACA-box
2H
structured_simple
TB11Cs4H1
H/ACA-box
2H
structured_simple
TB11Cs4H2
H/ACA-box
2H
structured_simple
TB11Cs4H3
H/ACA-box
2H
structured_simple
TB11Cs5H1
H/ACA-box
2H
structured_simple
TB11Cs5H2
H/ACA-box
2H
structured_simple
TB11Cs5H3
H/ACA-box
2H
structured_simple
TB3Cs2H1
H/ACA-box
2H
structured_simple
TB6Cs1H1
H/ACA-box
2H
structured_simple
TB6Cs1H3
H/ACA-box
2H
structured_simple
TB6Cs1H4
H/ACA-box
2H
structured_simple
TB8Cs2H1
H/ACA-box
2H
structured_simple
TB8Cs3H1
H/ACA-box
2H
structured_simple
TB8Cs4H2
H/ACA-box
2H
structured_simple
TB9Cs1H1
H/ACA-box
2H
structured_simple
TB9Cs1H2
H/ACA-box
2H
structured_simple
TB9Cs1H3
H/ACA-box
2H
structured_simple
TB9Cs2H1
H/ACA-box
2H
structured_simple
TB9Cs3H1
H/ACA-box
2H
structured_simple
TB9Cs3H2
H/ACA-box
2H
structured_simple
TB9Cs4H1
H/ACA-box
2H
structured_simple
TB9Cs4H2
H/ACA-box
2H
structured_simple
T-box
T-box
complex unclassified
structured_complex
TCL6_1
TCL6_1
2H
structured_simple
TCL6_2
TCL6_2
2H
structured_simple
TCL6_3
TCL6_3
multiple_domains
structured_complex
TCV_H4
TCV_H4
hairpin
structured_simple
TCV_H5
TCV_H5
hairpin
structured_simple
TCV_Pr
TCV_Pr
hairpin
structured_simple
Teg23
Teg23
complex unclassified
structured_complex
Teg49
Teg49
4WJ
structured_simple
Telomerase_Asco
Telomerase
telomerase
structured_complex
Telomerase-cil
Telomerase
telomerase
structured_complex
Telomerase-vert
Telomerase
telomerase
structured_complex
TeloSII_ncR30
TeloSII_ncR30
3WJ
structured_simple
TeloSII_ncR33
TeloSII_ncR33
4WJ
structured_simple
TeloSII_ncR40
TeloSII_ncR40
3WJ
structured_simple
TeloSII_ncR43
TeloSII_ncR43
complex unclassified
structured_complex
TeloSII_ncR45
TeloSII_ncR45
hairpin
structured_simple
TeloSII_ncR49
TeloSII_ncR49
hairpin
structured_simple
Termite-flg
Termite-flg
2H
structured_simple
Termite-leu
Termite-leu
2H
structured_simple
tfoR
tfoR
4H
structured_simple
THF
THF
complex unclassified
structured_complex
Thr_leader
Thr_leader
2H
structured_simple
TLS-PK1
tRNA
tRNA-like
structured_simple
TLS-PK2
tRNA
tRNA-like
structured_simple
TLS-PK3
tRNA
tRNA-like
structured_simple
TLS-PK4
tRNA
tRNA-like
structured_simple
TLS-PK5
tRNA
tRNA-like
structured_simple
TLS-PK6
tRNA
tRNA-like
structured_simple
tmRNA
tRNA
tRNA-like
structured_simple
TMV_UPD-PK1
TMV_UPD-PK1
pseudoknot_simple
structured_simple
TMV_UPD-PK3
TMV_UPD-PK3
pseudoknot_simple
structured_simple
Toga_5_CRE
Toga_5_CRE
complex unclassified
structured_complex
toga_FSE
toga_FSE
hairpin
structured_simple
Tombus_3_III
Tombus_3_III
2H
structured_simple
Tombus_3_IV
Tombus_3_IV
complex unclassified
structured_complex
Tombus_5
Tombus_5
complex unclassified
structured_complex
Tombus_IRE
Tombus_IRE
hairpin
structured_simple
ToxI
ToxI
hairpin
structured_simple
ToxT_thermometer
ToxT_thermometer
hairpin
structured_simple
tp2
tp2
hairpin
structured_simple
TP53TG1_1
TP53TG1_1
3WJ
structured_simple
TP53TG1_2
TP53TG1_2
4WJ
structured_simple
TP73-AS1
TP73-AS1
complex unclassified
structured_complex
tpke11
tpke11
2H
structured_simple
TPP
TPP
complex unclassified
structured_complex
tracrRNA
tracrRNA
hairpin
structured_simple
traJ_5
FinP-traJ
2H
structured_simple
traJ-II
traJ-II
3WJ
structured_simple
Trans44_sRNA
Trans44_sRNA
4H
structured_simple
tRNA
tRNA
tRNA-like
structured_simple
tRNA-Sec
tRNA
tRNA-like
structured_simple
Trp_leader
Trp_leader
2H
structured_simple
Trp_leader_2
Trp_leader_2
2H
structured_simple
TrxA_thermometer
TrxA_thermometer
2H
structured_simple
tsr1
tsr1
complex unclassified
structured_complex
tsr24
tsr24
complex unclassified
structured_complex
tsr25
tsr25
4H
structured_simple
tsr26
tsr26
4WJ
structured_simple
tsr31
tsr31
2H
structured_simple
tsr32
tsr32
4WJ
structured_simple
tsr33
tsr33
2H
structured_simple
TTC28-AS1_1
TTC28-AS1_1
complex unclassified
structured_complex
TTC28-AS1_2
TTC28-AS1_2
3WJ
structured_simple
TTC28-AS1_3
TTC28-AS1_3
3WJ
structured_simple
TTC28-AS1_4
TTC28-AS1_4
3WJ
structured_simple
TtnuCD1
C/D-box
hairpin
structured_simple
TtnuCD10
C/D-box
hairpin
structured_simple
TtnuCD11
C/D-box
hairpin
structured_simple
TtnuCD13
C/D-box
hairpin
structured_simple
TtnuCD14
C/D-box
hairpin
structured_simple
TtnuCD15
C/D-box
hairpin
structured_simple
TtnuCD16
C/D-box
hairpin
structured_simple
TtnuCD17
C/D-box
hairpin
structured_simple
TtnuCD18
C/D-box
hairpin
structured_simple
TtnuCD19
C/D-box
hairpin
structured_simple
TtnuCD20
C/D-box
hairpin
structured_simple
TtnuCD21
C/D-box
hairpin
structured_simple
TtnuCD22
C/D-box
hairpin
structured_simple
TtnuCD23
C/D-box
hairpin
structured_simple
TtnuCD24
C/D-box
hairpin
structured_simple
TtnuCD25
C/D-box
hairpin
structured_simple
TtnuCD26
C/D-box
hairpin
structured_simple
TtnuCD28
C/D-box
hairpin
structured_simple
TtnuCD29
C/D-box
hairpin
structured_simple
TtnuCD3
C/D-box
hairpin
structured_simple
TtnuCD31
C/D-box
hairpin
structured_simple
TtnuCD32
C/D-box
hairpin
structured_simple
TtnuCD33
C/D-box
hairpin
structured_simple
TtnuCD34
C/D-box
hairpin
structured_simple
TtnuCD4
C/D-box
hairpin
structured_simple
TtnuCD5
C/D-box
hairpin
structured_simple
TtnuCD6
C/D-box
hairpin
structured_simple
TtnuCD7
C/D-box
hairpin
structured_simple
TtnuCD8
C/D-box
hairpin
structured_simple
TtnuCD9
C/D-box
hairpin
structured_simple
TtnuHACA1
H/ACA-box
2H
structured_simple
TtnuHACA10
H/ACA-box
2H
structured_simple
TtnuHACA11a
H/ACA-box
2H
structured_simple
TtnuHACA12
H/ACA-box
2H
structured_simple
TtnuHACA13
H/ACA-box
2H
structured_simple
TtnuHACA14
H/ACA-box
2H
structured_simple
TtnuHACA15
H/ACA-box
2H
structured_simple
TtnuHACA16
H/ACA-box
2H
structured_simple
TtnuHACA17
H/ACA-box
2H
structured_simple
TtnuHACA18
H/ACA-box
2H
structured_simple
TtnuHACA19
H/ACA-box
2H
structured_simple
TtnuHACA2
H/ACA-box
2H
structured_simple
TtnuHACA20
H/ACA-box
2H
structured_simple
TtnuHACA21
H/ACA-box
2H
structured_simple
TtnuHACA22
H/ACA-box
2H
structured_simple
TtnuHACA23
H/ACA-box
2H
structured_simple
TtnuHACA24
H/ACA-box
2H
structured_simple
TtnuHACA25
H/ACA-box
2H
structured_simple
TtnuHACA27
H/ACA-box
2H
structured_simple
TtnuHACA28
H/ACA-box
2H
structured_simple
TtnuHACA3
H/ACA-box
2H
structured_simple
TtnuHACA5
H/ACA-box
2H
structured_simple
TtnuHACA6
H/ACA-box
2H
structured_simple
TtnuHACA7
H/ACA-box
2H
structured_simple
TtnuHACA8
H/ACA-box
2H
structured_simple
TtnuHACA9
H/ACA-box
2H
structured_simple
TUG1_1
TUG1_1
hairpin
structured_simple
TUG1_2
TUG1_2
2H
structured_simple
TUG1_3
TUG1_3
complex unclassified
structured_complex
TUG1_4
TUG1_4
complex unclassified
structured_complex
TUSC7
TUSC7
4H
structured_simple
Twister-P5
Twister-P5
complex unclassified
structured_complex
Twister-sister
Twister-sister
4WJ
structured_simple
TwoAYGGAY
Csr_Rsm_clan
complex unclassified
structured_complex
Tymo_tRNA-like
tRNA
tRNA-like
structured_simple
U1
U1
U1_snRNA
structured_complex
U11
U1
U1_snRNA
structured_complex
U12
U2
Intron_gpII-like
structured_complex
U1A_PIE
U1A_PIE
hairpin
structured_simple
U1_yeast
U1
U1_snRNA
structured_complex
U2
U2
Intron_gpII-like
structured_complex
U3
C/D-box
hairpin
structured_simple
U4
U4
U4_snRNA
structured_complex
U4atac
U4
U4_snRNA
structured_complex
U5
U5
Intron_gpII-like
structured_complex
U54
C/D-box
hairpin
structured_simple
U6
U6
Intron_gpII-like
structured_complex
U6atac
U6
Intron_gpII-like
structured_complex
U7
U7
hairpin
structured_simple
U8
C/D-box
hairpin
structured_simple
uc_338
uc_338
3WJ
structured_simple
UCA1
UCA1
3WJ
structured_simple
UnaL2
UnaL2
hairpin
structured_simple
UPD-PK2
UPD-PK2
pseudoknot_simple
structured_simple
UPD-PKc
UPD-PKc
pseudoknot_simple
structured_simple
UPD-PKib
UPD-PKib
pseudoknot_simple
structured_simple
UPSK
UPSK
pseudoknot_simple
structured_simple
UptR
UptR
3H
structured_simple
URE2_IRES
URE2_IRES
hairpin
structured_simple
VA
VA
3WJ
structured_simple
Va-907
Va-907
complex unclassified
structured_complex
Vault
Vault
hairpin
structured_simple
Vax2os1_1
Vax2os1_1
3WJ
structured_simple
Vax2os1_2
Vax2os1_2
complex unclassified
structured_complex
Vax2os1_3
Vax2os1_3
complex unclassified
structured_complex
veev_FSE
veev_FSE
hairpin
structured_simple
Vg1_ribozyme
Vg1_ribozyme
complex unclassified
structured_complex
Vimentin3
Vimentin2
3WJ
structured_simple
Virus_CITE_1
Virus_CITE_1
4WJ
structured_simple
Virus_CITE_2
Virus_CITE_2
3WJ
structured_simple
Virus_CITE_3
Virus_CITE_3
3WJ
structured_simple
Virus_CITE_4
Virus_CITE_4
3WJ
structured_simple
Virus_CITE_5
Virus_CITE_5
hairpin
structured_simple
Virus_CITE_6
Virus_CITE_6
3WJ
structured_simple
Virus_CITE_7
Virus_CITE_7
3WJ
structured_simple
Virus_CITE_8
Virus_CITE_8
3WJ
structured_simple
VIS1
VIS1
4H
structured_simple
VrrA
VrrA
2H
structured_simple
VR-RNA
VR-RNA
complex unclassified
structured_complex
v-snoRNA-1
C/D-box
hairpin
structured_simple
wcaG
wcaG
complex unclassified
structured_complex
weev_FSE
weev_FSE
hairpin
structured_simple
whalefall-1
whalefall-1
2H
structured_simple
WLE3
WLE3
hairpin
structured_simple
WsnRNA46
WsnRNA46
hairpin
structured_simple
WsnRNA59
WsnRNA59
hairpin
structured_simple
WT1-AS_1
WT1-AS_1
3H
structured_simple
WT1-AS_2
WT1-AS_2
4WJ
structured_simple
WT1-AS_3
WT1-AS_3
complex unclassified
structured_complex
WT1-AS_4
WT1-AS_4
3WJ
structured_simple
WT1-AS_5
WT1-AS_5
hairpin
structured_simple
WT1-AS_6
WT1-AS_6
3WJ
structured_simple
WT1-AS_7
WT1-AS_7
complex unclassified
structured_complex
WT1-AS_8
WT1-AS_8
3H
structured_simple
XIST_A_REPEAT
XIST_A_REPEAT
2H
structured_simple
Xist_exon1
Xist_exon1
3H
structured_simple
Xist_exon4
Xist_exon4
hairpin
structured_simple
XIST_intron
XIST_intron
hairpin
structured_simple
Xoo1
Xoo1
complex unclassified
structured_complex
Xoo2
Xoo2
3H
structured_simple
Xoo5
Xoo5
3WJ
structured_simple
Xoo8
Xoo8
complex unclassified
structured_complex
Yar_1
Yar_1
hairpin
structured_simple
Yar_2
Yar_2
2H
structured_simple
Yar_3
Yar_3
3WJ
structured_simple
ybhL
ybhL
hairpin
structured_simple
ydaO-yuaA
ydaO-yuaA
complex unclassified
structured_complex
YenS
YenS
complex unclassified
structured_complex
Yfr1
Yfr1
2H
structured_simple
Yfr10
Yfr10
2H
structured_simple
Yfr11
Yfr11
3WJ
structured_simple
Yfr13
Yfr13
4H
structured_simple
Yfr17
Yfr17
3WJ
structured_simple
Yfr19
Yfr19
2H
structured_simple
Yfr20
Yfr20
3H
structured_simple
Yfr21
Yfr21
complex unclassified
structured_complex
Yfr8
Yfr8
complex unclassified
structured_complex
YFV_3UTR
YFV_3UTR
complex unclassified
structured_complex
yjdF
yjdF
4WJ
structured_simple
ykkC-III
ykkC-III
2H
structured_simple
ykkC-yxkD
ykkC-yxkD
2H
structured_simple
ykoK
ykoK
complex unclassified
structured_complex
ylbH
ylbH
3H
structured_simple
YrlA
YrlA
4WJ
structured_simple
YrlB
YrlB
hairpin
structured_simple
Y_RNA
Y_RNA
hairpin
structured_simple
Ysr141
Ysr141
complex unclassified
structured_complex
Ysr155(RyfD)
Ysr155(RyfD)
complex unclassified
structured_complex
Ysr186_sR026_CsrC
Csr_Rsm_clan
complex unclassified
structured_complex
Ysr190
Ysr190
2H
structured_simple
Ysr202
Ysr202
complex unclassified
structured_complex
Ysr209
Ysr209
hairpin
structured_simple
Ysr224
Ysr224
4WJ
structured_simple
Ysr35
Ysr35
complex unclassified
structured_complex
Ysr49
Ysr49
4H
structured_simple
yybP-ykoY
yybP-ykoY
3H
structured_simple
ZEB2_AS1_1
ZEB2_AS1_1
3H
structured_simple
ZEB2_AS1_2
ZEB2_AS1_2
2H
structured_simple
ZEB2_AS1_3
ZEB2_AS1_3
3WJ
structured_simple
ZEB2_AS1_4
ZEB2_AS1_4
2H
structured_simple
ZFAT-AS1_1
ZFAT-AS1_1
3WJ
structured_simple
ZFAT-AS1_2
ZFAT-AS1_2
4WJ
structured_simple
ZFAT-AS1_3
ZFAT-AS1_3
4WJ
structured_simple
ZNFX1-AS1_1
ZNFX1-AS1_1
multiple_domains
structured_complex
ZNFX1-AS1_2
ZNFX1-AS1_2
hairpin
structured_simple
ZNFX1-AS1_3
ZNFX1-AS1_3
hairpin
structured_simple
ZNRD1-AS1_1
ZNRD1-AS1_1
hairpin
structured_simple
ZNRD1-AS1_2
ZNRD1-AS1_2
4WJ
structured_simple
ZNRD1-AS1_3
ZNRD1-AS1_3
hairpin
structured_simple