Subfamily Intron_gpI-IC2

Tertiary Structure
Consensus Secondary Structure

Download the aligments for this family. (.stk)

RNA Shape

Level1

(((()))((((()))()))((()))(())(())(()))

Level2

(()(()())()()()())

Consensus Secondary Structure representation

>predicted reference Intron_gpI-IC2

UUACAUGCCUGAUAAGUGAUUUAGGAAAUCACCUGAUUUGGGUU.AAACUAUCAAACUCCGGGGACACCCUAAAGCUUAUGAUACCAAGCUAUAUUC.GAAAGACUAUAAGUGGCUGAAAUAAUUACUCAG.GUAUGGUAACAAGUCAUA.AGAUGAUC.GAAAGAGAAAUGGGUUAUCGCGGAUCUAAAUCAGUAUUAAACAAAAAGUAAUACUGUAAAAGAGCAACGAGUAGACGGUAGUUGCUUUAUUAA.UAUAUUUUAUAAAGUUAAGGUGUAC.UCUAAUGGGUUUCGAAAGAAAUUAUCAAUUCAAAUUUUGAA.AGCCAUGUGAUAUAAUA

.....(...(.(........................(.)).)....................(.....((.....((.((...........(((...........))).......................................))..))....(.......).....))....)......((.....(...(...............)...).....)).....(.((.....)).)....((.(..............).)).................((....(........)..........................))...)......